RNA–Protein interactions for RNA: ENST00000231134.7

PCDHB5-201, Transcript of protocadherin beta 5, humanhuman

APPRIS P1 BASIC

Gene PCDHB5, Length 3,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-201ENST00000231134 PRXQ9BXM0 1461 aa17.9■□□□□ 0.46
PCDHB5-201ENST00000231134 KIF27Q86VH2 1401 aa17.89■□□□□ 0.45
PCDHB5-201ENST00000231134 CRBNQ96SW2 442 aa17.88■□□□□ 0.45
PCDHB5-201ENST00000231134 CCDC18Q5T9S5 1454 aa17.88■□□□□ 0.45
PCDHB5-201ENST00000231134 LRRC9Q6ZRR7 1453 aa17.87■□□□□ 0.45
PCDHB5-201ENST00000231134 CDCA7LQ96GN5 454 aa17.84■□□□□ 0.45
PCDHB5-201ENST00000231134 NCAPD3P42695 1498 aa17.84■□□□□ 0.45
PCDHB5-201ENST00000231134 RRP9O43818 475 aaKnown RBP17.84■□□□□ 0.45
PCDHB5-201ENST00000231134 MTUS2Q5JR59 1369 aa17.83■□□□□ 0.45
PCDHB5-201ENST00000231134 L1TD1Q5T7N2 865 aaKnown RBP17.83■□□□□ 0.45
PCDHB5-201ENST00000231134 SPRYD3Q8NCJ5 442 aa17.83■□□□□ 0.44
PCDHB5-201ENST00000231134 FHOD3Q2V2M9 1422 aa17.83■□□□□ 0.44
PCDHB5-201ENST00000231134 PNISRQ8TF01 805 aaKnown RBP17.81■□□□□ 0.44
PCDHB5-201ENST00000231134 PEG3Q9GZU2 1588 aa17.81■□□□□ 0.44
PCDHB5-201ENST00000231134 NBPF8Q3BBV2 869 aa17.81■□□□□ 0.44
PCDHB5-201ENST00000231134 AQRO60306 1485 aaKnown RBP eCLIP17.8■□□□□ 0.44
PCDHB5-201ENST00000231134 ARID3AQ99856 593 aa17.8■□□□□ 0.44
PCDHB5-201ENST00000231134 UACAQ9BZF9 1416 aa17.8■□□□□ 0.44
PCDHB5-201ENST00000231134 PANK2Q9BZ23 570 aa17.79■□□□□ 0.44
PCDHB5-201ENST00000231134 FAM161AQ3B820 660 aa17.79■□□□□ 0.44
PCDHB5-201ENST00000231134 TIAM1Q13009 1591 aa17.78■□□□□ 0.44
PCDHB5-201ENST00000231134 NCOA1Q15788 1441 aa17.76■□□□□ 0.43
PCDHB5-201ENST00000231134 GOLGA6L3A6NEY3 463 aa17.76■□□□□ 0.43
PCDHB5-201ENST00000231134 NCOA2Q15596 1464 aa17.76■□□□□ 0.43
PCDHB5-201ENST00000231134 C20orf194Q5TEA3 1177 aa17.75■□□□□ 0.43
PCDHB5-201ENST00000231134 ERICH3Q5RHP9 1530 aa17.75■□□□□ 0.43
PCDHB5-201ENST00000231134 MPHOSPH9Q99550 1183 aa17.73■□□□□ 0.43
PCDHB5-201ENST00000231134 PTPRKQ15262 1439 aa17.73■□□□□ 0.43
PCDHB5-201ENST00000231134 KDM2AQ9Y2K7 1162 aa17.72■□□□□ 0.43
PCDHB5-201ENST00000231134 XRCC6P12956 609 aaKnown RBP eCLIP17.72■□□□□ 0.43
PCDHB5-201ENST00000231134 CARMIL1Q5VZK9 1371 aa17.72■□□□□ 0.43
PCDHB5-201ENST00000231134 SLC4A1APQ9BWU0 796 aaKnown RBP17.7■□□□□ 0.42
PCDHB5-201ENST00000231134 C8orf34Q49A92 452 aa17.69■□□□□ 0.42
PCDHB5-201ENST00000231134 FMN1Q68DA7 1419 aa17.69■□□□□ 0.42
PCDHB5-201ENST00000231134 RBM10P98175 930 aaKnown RBP17.69■□□□□ 0.42
PCDHB5-201ENST00000231134 TRIM44Q96DX7 344 aaPredicted RBP17.69■□□□□ 0.42
PCDHB5-201ENST00000231134 BECN1Q14457 450 aa17.68■□□□□ 0.42
PCDHB5-201ENST00000231134 CLCN1P35523 988 aa17.68■□□□□ 0.42
PCDHB5-201ENST00000231134 MAP3K1Q13233 1512 aa17.67■□□□□ 0.42
PCDHB5-201ENST00000231134 TOP2BQ02880 1626 aa17.67■□□□□ 0.42
PCDHB5-201ENST00000231134 FGD6Q6ZV73 1430 aa17.66■□□□□ 0.42
PCDHB5-201ENST00000231134 KTN1Q86UP2 1357 aaKnown RBP17.65■□□□□ 0.42
PCDHB5-201ENST00000231134 MYH16Q9H6N6 1097 aa17.64■□□□□ 0.41
PCDHB5-201ENST00000231134 CENPQQ7L2Z9 268 aaPredicted RBP17.64■□□□□ 0.41
PCDHB5-201ENST00000231134 IGF1RP08069 1367 aa17.64■□□□□ 0.41
PCDHB5-201ENST00000231134 ATAD2BQ9ULI0 1458 aa17.63■□□□□ 0.41
PCDHB5-201ENST00000231134 HFM1A2PYH4 1435 aa17.63■□□□□ 0.41
PCDHB5-201ENST00000231134 NAIPQ13075 1403 aa17.63■□□□□ 0.41
PCDHB5-201ENST00000231134 CC2D1BQ5T0F9 858 aaKnown RBP17.62■□□□□ 0.41
PCDHB5-201ENST00000231134 DHX29Q7Z478 1369 aaKnown RBP17.61■□□□□ 0.41
PCDHB5-201ENST00000231134 ESPNB1AK53 854 aa17.61■□□□□ 0.41
PCDHB5-201ENST00000231134 KDM5BQ9UGL1 1544 aa17.6■□□□□ 0.41
PCDHB5-201ENST00000231134 CUX1P39880 1505 aa17.58■□□□□ 0.41
PCDHB5-201ENST00000231134 PCF11O94913 1555 aaKnown RBP17.58■□□□□ 0.4
PCDHB5-201ENST00000231134 FAM13BQ9NYF5 915 aa17.57■□□□□ 0.4
PCDHB5-201ENST00000231134 MYBBP1AQ9BQG0 1328 aaKnown RBP17.57■□□□□ 0.4
PCDHB5-201ENST00000231134 SEC24BO95487 1268 aa17.57■□□□□ 0.4
PCDHB5-201ENST00000231134 PDE3BQ13370 1112 aa17.57■□□□□ 0.4
PCDHB5-201ENST00000231134 CARD11Q9BXL7 1154 aa17.56■□□□□ 0.4
PCDHB5-201ENST00000231134 UNC13AQ9UPW8 1703 aa17.56■□□□□ 0.4
PCDHB5-201ENST00000231134 USP47Q96K76 1375 aa17.55■□□□□ 0.4
PCDHB5-201ENST00000231134 KIAA1211Q6ZU35 1233 aa17.54■□□□□ 0.4
PCDHB5-201ENST00000231134 UPF2Q9HAU5 1272 aaKnown RBP17.54■□□□□ 0.4
PCDHB5-201ENST00000231134 PDCL3Q9H2J4 239 aa17.53■□□□□ 0.4
PCDHB5-201ENST00000231134 ZNF777Q9ULD5 760 aaPredicted RBP17.53■□□□□ 0.4
PCDHB5-201ENST00000231134 PTPN23Q9H3S7 1636 aa17.53■□□□□ 0.4
PCDHB5-201ENST00000231134 ERBB4Q15303 1308 aa17.52■□□□□ 0.4
PCDHB5-201ENST00000231134 TRAK2O60296 914 aa17.52■□□□□ 0.4
PCDHB5-201ENST00000231134 KDM2BQ8NHM5 1336 aa17.51■□□□□ 0.39
PCDHB5-201ENST00000231134 PRDM10Q9NQV6 1147 aa17.5■□□□□ 0.39
PCDHB5-201ENST00000231134 KIF15Q9NS87 1388 aa17.5■□□□□ 0.39
PCDHB5-201ENST00000231134 ST20-MTHFSA0A0A6YYL1 179 aa17.5■□□□□ 0.39
PCDHB5-201ENST00000231134 MCM4P33991 863 aa17.5■□□□□ 0.39
PCDHB5-201ENST00000231134 MRE11P49959 708 aa17.5■□□□□ 0.39
PCDHB5-201ENST00000231134 NLRP13Q86W25 1043 aa17.5■□□□□ 0.39
PCDHB5-201ENST00000231134 GRPEL1Q9HAV7 217 aa17.5■□□□□ 0.39
PCDHB5-201ENST00000231134 RALBP1Q15311 655 aa17.49■□□□□ 0.39
PCDHB5-201ENST00000231134 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.49■□□□□ 0.39
PCDHB5-201ENST00000231134 ZHX1Q9UKY1 873 aaPredicted RBP17.49■□□□□ 0.39
PCDHB5-201ENST00000231134 CANXP27824 592 aaKnown RBP17.49■□□□□ 0.39
PCDHB5-201ENST00000231134 AAMPQ13685 434 aa17.49■□□□□ 0.39
PCDHB5-201ENST00000231134 CFTRP13569 1480 aa17.48■□□□□ 0.39
PCDHB5-201ENST00000231134 ZBTB7CA1YPR0 619 aa17.48■□□□□ 0.39
PCDHB5-201ENST00000231134 TPM2P07951 284 aa17.48■□□□□ 0.39
PCDHB5-201ENST00000231134 BRD4O60885 1362 aaPredicted RBP17.47■□□□□ 0.39
PCDHB5-201ENST00000231134 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.46■□□□□ 0.39
PCDHB5-201ENST00000231134 BICRAQ9NZM4 1560 aa17.45■□□□□ 0.38
PCDHB5-201ENST00000231134 TBC1D2Q9BYX2 928 aa17.45■□□□□ 0.38
PCDHB5-201ENST00000231134 LRPPRCP42704 1394 aaKnown RBP17.44■□□□□ 0.38
PCDHB5-201ENST00000231134 ZNF644Q9H582 1327 aaPredicted RBP17.44■□□□□ 0.38
PCDHB5-201ENST00000231134 FSD2A1L4K1 749 aa17.43■□□□□ 0.38
PCDHB5-201ENST00000231134 R3HCC1Q9Y3T6 440 aaKnown RBP17.43■□□□□ 0.38
PCDHB5-201ENST00000231134 CALD1Q05682 793 aaKnown RBP17.43■□□□□ 0.38
PCDHB5-201ENST00000231134 RGL3Q3MIN7 710 aa17.43■□□□□ 0.38
PCDHB5-201ENST00000231134 SPATA31E1Q6ZUB1 1445 aa17.42■□□□□ 0.38
PCDHB5-201ENST00000231134 SLC24A1O60721 1099 aa17.42■□□□□ 0.38
PCDHB5-201ENST00000231134 USP19O94966 1318 aa17.41■□□□□ 0.38
PCDHB5-201ENST00000231134 MSNP26038 577 aaKnown RBP17.41■□□□□ 0.38
PCDHB5-201ENST00000231134 MYOM3Q5VTT5 1437 aa17.41■□□□□ 0.38
PCDHB5-201ENST00000231134 IGHDP01880 384 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms