RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 SETD5Q9C0A6 1442 aa14.7□□□□□ -0.06
LAMA4-201ENST00000230538 L1TD1Q5T7N2 865 aaKnown RBP14.7□□□□□ -0.06
LAMA4-201ENST00000230538 RTF1Q92541 710 aaKnown RBP14.7□□□□□ -0.06
LAMA4-201ENST00000230538 DRC7Q8IY82 874 aa14.7□□□□□ -0.06
LAMA4-201ENST00000230538 CFAP44Q96MT7 982 aa14.7□□□□□ -0.06
LAMA4-201ENST00000230538 SAFB2Q14151 953 aaKnown RBP eCLIP14.69□□□□□ -0.06
LAMA4-201ENST00000230538 RBM19Q9Y4C8 960 aaKnown RBP14.69□□□□□ -0.06
LAMA4-201ENST00000230538 CCER2I3L3R5 266 aa14.69□□□□□ -0.06
LAMA4-201ENST00000230538 ARHGAP35Q9NRY4 1499 aa14.68□□□□□ -0.06
LAMA4-201ENST00000230538 CLSTN1O94985 981 aa14.68□□□□□ -0.06
LAMA4-201ENST00000230538 MLECQ14165 292 aa14.68□□□□□ -0.06
LAMA4-201ENST00000230538 FOXD1Q16676 465 aa14.68□□□□□ -0.06
LAMA4-201ENST00000230538 BAZ1AQ9NRL2 1556 aaPredicted RBP14.66□□□□□ -0.06
LAMA4-201ENST00000230538 GNL2Q13823 731 aaKnown RBP14.66□□□□□ -0.06
LAMA4-201ENST00000230538 KTN1Q86UP2 1357 aaKnown RBP14.66□□□□□ -0.06
LAMA4-201ENST00000230538 CUX2O14529 1486 aa14.66□□□□□ -0.06
LAMA4-201ENST00000230538 ISY1Q9ULR0 285 aaKnown RBP14.65□□□□□ -0.06
LAMA4-201ENST00000230538 CARMIL1Q5VZK9 1371 aa14.65□□□□□ -0.06
LAMA4-201ENST00000230538 APBB1O00213 710 aa14.65□□□□□ -0.06
LAMA4-201ENST00000230538 HDGFL2Q7Z4V5 671 aaPredicted RBP14.64□□□□□ -0.07
LAMA4-201ENST00000230538 ABCC8Q09428 1581 aa14.64□□□□□ -0.07
LAMA4-201ENST00000230538 IPO8O15397 1037 aaKnown RBP14.64□□□□□ -0.07
LAMA4-201ENST00000230538 TIMELESSQ9UNS1 1208 aa14.64□□□□□ -0.07
LAMA4-201ENST00000230538 STK26Q9P289 416 aa14.63□□□□□ -0.07
LAMA4-201ENST00000230538 KIAA1211Q6ZU35 1233 aa14.63□□□□□ -0.07
LAMA4-201ENST00000230538 KANK4Q5T7N3 995 aaPredicted RBP14.61□□□□□ -0.07
LAMA4-201ENST00000230538 CECR2Q9BXF3 1484 aa14.61□□□□□ -0.07
LAMA4-201ENST00000230538 ROCK2O75116 1388 aaKnown RBP14.6□□□□□ -0.07
LAMA4-201ENST00000230538 PKD2Q13563 968 aa14.59□□□□□ -0.07
LAMA4-201ENST00000230538 ITPRIPQ8IWB1 547 aa14.59□□□□□ -0.07
LAMA4-201ENST00000230538 CALD1Q05682 793 aaKnown RBP14.59□□□□□ -0.07
LAMA4-201ENST00000230538 PTMSP20962 102 aa14.59□□□□□ -0.07
LAMA4-201ENST00000230538 GGT6Q6P531 493 aa14.59□□□□□ -0.07
LAMA4-201ENST00000230538 GBP4Q96PP9 640 aa14.59□□□□□ -0.07
LAMA4-201ENST00000230538 NCBP3Q53F19 620 aaKnown RBP14.58□□□□□ -0.07
LAMA4-201ENST00000230538 VPS8Q8N3P4 1428 aa14.58□□□□□ -0.07
LAMA4-201ENST00000230538 TRHP20396 242 aaPredicted RBP14.58□□□□□ -0.08
LAMA4-201ENST00000230538 RCAN3Q9UKA8 241 aa14.58□□□□□ -0.08
LAMA4-201ENST00000230538 PAK3O75914 559 aaPredicted RBP14.58□□□□□ -0.08
LAMA4-201ENST00000230538 RWDD1Q9H446 243 aaPredicted RBP14.58□□□□□ -0.08
LAMA4-201ENST00000230538 U2AF1L5P0DN76 240 aaPredicted RBP14.57□□□□□ -0.08
LAMA4-201ENST00000230538 U2AF1Q01081 240 aaKnown RBP eCLIP14.57□□□□□ -0.08
LAMA4-201ENST00000230538 RAB3GAP2Q9H2M9 1393 aa14.57□□□□□ -0.08
LAMA4-201ENST00000230538 KIAA2012Q0VF49 1180 aa14.56□□□□□ -0.08
LAMA4-201ENST00000230538 GZF1Q9H116 711 aaPredicted RBP14.55□□□□□ -0.08
LAMA4-201ENST00000230538 ZNF330Q9Y3S2 320 aaPredicted RBP14.55□□□□□ -0.08
LAMA4-201ENST00000230538 CSB-PGBD3P0DP91 1061 aa14.54□□□□□ -0.08
LAMA4-201ENST00000230538 RALBP1Q15311 655 aa14.54□□□□□ -0.08
LAMA4-201ENST00000230538 HTATSF1O43719 755 aaKnown RBP14.53□□□□□ -0.08
LAMA4-201ENST00000230538 MPHOSPH9Q99550 1183 aa14.53□□□□□ -0.08
LAMA4-201ENST00000230538 SLKQ9H2G2 1235 aaPredicted RBP14.53□□□□□ -0.08
LAMA4-201ENST00000230538 PMFBP1Q8TBY8 1022 aa14.52□□□□□ -0.09
LAMA4-201ENST00000230538 CCDC88BA6NC98 1476 aa14.52□□□□□ -0.09
LAMA4-201ENST00000230538 TCERG1O14776 1098 aaKnown RBP14.51□□□□□ -0.09
LAMA4-201ENST00000230538 SYAP1Q96A49 352 aaPredicted RBP14.51□□□□□ -0.09
LAMA4-201ENST00000230538 EIF3AQ14152 1382 aaKnown RBP14.5□□□□□ -0.09
LAMA4-201ENST00000230538 SPAG9O60271 1321 aaKnown RBP14.5□□□□□ -0.09
LAMA4-201ENST00000230538 GPATCH3Q96I76 525 aa14.5□□□□□ -0.09
LAMA4-201ENST00000230538 STK31Q9BXU1 1019 aa14.5□□□□□ -0.09
LAMA4-201ENST00000230538 MFAP1P55081 439 aaKnown RBP14.49□□□□□ -0.09
LAMA4-201ENST00000230538 GORABQ5T7V8 394 aa14.49□□□□□ -0.09
LAMA4-201ENST00000230538 TPM4P67936 248 aa14.49□□□□□ -0.09
LAMA4-201ENST00000230538 CCDC146Q8IYE0 955 aa14.49□□□□□ -0.09
LAMA4-201ENST00000230538 TSHZ2Q9NRE2 1034 aa14.49□□□□□ -0.09
LAMA4-201ENST00000230538 CHMP3Q9Y3E7 222 aa14.48□□□□□ -0.09
LAMA4-201ENST00000230538 HSP90B1P14625 803 aaKnown RBP14.48□□□□□ -0.09
LAMA4-201ENST00000230538 SMC4Q9NTJ3 1288 aa14.48□□□□□ -0.09
LAMA4-201ENST00000230538 TRIM6-TRIM34B2RNG4 842 aa14.48□□□□□ -0.09
LAMA4-201ENST00000230538 NOC3LQ8WTT2 800 aaKnown RBP14.48□□□□□ -0.09
LAMA4-201ENST00000230538 ARID3AQ99856 593 aa14.48□□□□□ -0.09
LAMA4-201ENST00000230538 NUP155O75694 1391 aa14.48□□□□□ -0.09
LAMA4-201ENST00000230538 CARMIL2Q6F5E8 1435 aa14.48□□□□□ -0.09
LAMA4-201ENST00000230538 AMER1Q5JTC6 1135 aaPredicted RBP14.47□□□□□ -0.09
LAMA4-201ENST00000230538 CHMP4AQ9BY43 222 aa14.47□□□□□ -0.09
LAMA4-201ENST00000230538 TAF7LQ5H9L4 462 aa14.46□□□□□ -0.09
LAMA4-201ENST00000230538 TMX4Q9H1E5 349 aaPredicted RBP14.46□□□□□ -0.09
LAMA4-201ENST00000230538 ANKRD30AQ9BXX3 1397 aa14.45□□□□□ -0.1
LAMA4-201ENST00000230538 MROH2BQ7Z745 1585 aa14.45□□□□□ -0.1
LAMA4-201ENST00000230538 HMMRO75330 724 aa14.45□□□□□ -0.1
LAMA4-201ENST00000230538 FOXD4L1Q9NU39 408 aa14.44□□□□□ -0.1
LAMA4-201ENST00000230538 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.44□□□□□ -0.1
LAMA4-201ENST00000230538 IPO9Q96P70 1041 aaKnown RBP14.43□□□□□ -0.1
LAMA4-201ENST00000230538 GOLGA6L3A6NEY3 463 aa14.43□□□□□ -0.1
LAMA4-201ENST00000230538 CSPP1Q1MSJ5 1256 aa14.43□□□□□ -0.1
LAMA4-201ENST00000230538 SLC4A10Q6U841 1118 aa14.43□□□□□ -0.1
LAMA4-201ENST00000230538 TERF2IPQ9NYB0 399 aa14.43□□□□□ -0.1
LAMA4-201ENST00000230538 HDAC5Q9UQL6 1122 aa14.43□□□□□ -0.1
LAMA4-201ENST00000230538 CCDC34Q96HJ3 373 aa14.42□□□□□ -0.1
LAMA4-201ENST00000230538 EFCAB2Q5VUJ9 269 aa14.41□□□□□ -0.1
LAMA4-201ENST00000230538 NOL8Q76FK4 1167 aaKnown RBP14.41□□□□□ -0.1
LAMA4-201ENST00000230538 CENPJQ9HC77 1338 aaPredicted RBP14.4□□□□□ -0.1
LAMA4-201ENST00000230538 FMN1Q68DA7 1419 aa14.4□□□□□ -0.1
LAMA4-201ENST00000230538 NUTM2DQ5VT03 806 aaPredicted RBP14.4□□□□□ -0.1
LAMA4-201ENST00000230538 CLUAP1Q96AJ1 413 aa14.4□□□□□ -0.1
LAMA4-201ENST00000230538 CCDC9Q9Y3X0 531 aaKnown RBP14.4□□□□□ -0.1
LAMA4-201ENST00000230538 WIZO95785 1651 aa14.4□□□□□ -0.1
LAMA4-201ENST00000230538 RASSF8Q8NHQ8 419 aa14.39□□□□□ -0.11
LAMA4-201ENST00000230538 LMOD3Q0VAK6 560 aa14.39□□□□□ -0.11
LAMA4-201ENST00000230538 L3MBTL2Q969R5 705 aa14.39□□□□□ -0.11
LAMA4-201ENST00000230538 HNRNPMP52272 730 aaKnown RBP eCLIP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms