RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 FAM50AQ14320 339 aaKnown RBP13.49□□□□□ -0.25
HLA-DOA-201ENST00000229829 SIN3AQ96ST3 1273 aa13.49□□□□□ -0.25
HLA-DOA-201ENST00000229829 CROCC2H7BZ55 1655 aa13.48□□□□□ -0.25
HLA-DOA-201ENST00000229829 EPRSP07814 1512 aaKnown RBP13.47□□□□□ -0.25
HLA-DOA-201ENST00000229829 LRRC9Q6ZRR7 1453 aa13.47□□□□□ -0.25
HLA-DOA-201ENST00000229829 ERICH6Q7L0X2 663 aa13.47□□□□□ -0.25
HLA-DOA-201ENST00000229829 PCF11O94913 1555 aaKnown RBP13.47□□□□□ -0.25
HLA-DOA-201ENST00000229829 ZNF142P52746 1687 aaPredicted RBP13.46□□□□□ -0.26
HLA-DOA-201ENST00000229829 SETD5Q9C0A6 1442 aa13.45□□□□□ -0.26
HLA-DOA-201ENST00000229829 PLXNC1O60486 1568 aa13.45□□□□□ -0.26
HLA-DOA-201ENST00000229829 ARHGEF40Q8TER5 1519 aa13.44□□□□□ -0.26
HLA-DOA-201ENST00000229829 CDC42BPBQ9Y5S2 1711 aa13.44□□□□□ -0.26
HLA-DOA-201ENST00000229829 CDC42BPAQ5VT25 1732 aa13.43□□□□□ -0.26
HLA-DOA-201ENST00000229829 NEO1Q92859 1461 aa13.43□□□□□ -0.26
HLA-DOA-201ENST00000229829 HIRIP3Q9BW71 556 aaPredicted RBP13.41□□□□□ -0.26
HLA-DOA-201ENST00000229829 INO80Q9ULG1 1556 aaPredicted RBP13.41□□□□□ -0.26
HLA-DOA-201ENST00000229829 FHOD3Q2V2M9 1422 aa13.41□□□□□ -0.26
HLA-DOA-201ENST00000229829 DDX10Q13206 875 aaKnown RBP13.41□□□□□ -0.26
HLA-DOA-201ENST00000229829 EIF2AK4Q9P2K8 1649 aaKnown RBP13.4□□□□□ -0.26
HLA-DOA-201ENST00000229829 TDRD9Q8NDG6 1382 aaKnown RBP13.4□□□□□ -0.26
HLA-DOA-201ENST00000229829 FER1L4A9Z1Z3 1794 aa13.39□□□□□ -0.27
HLA-DOA-201ENST00000229829 RTN4Q9NQC3 1192 aaKnown RBP13.39□□□□□ -0.27
HLA-DOA-201ENST00000229829 SIGLEC1Q9BZZ2 1709 aa13.38□□□□□ -0.27
HLA-DOA-201ENST00000229829 TTC37Q6PGP7 1564 aa13.38□□□□□ -0.27
HLA-DOA-201ENST00000229829 ZC3H13Q5T200 1668 aaKnown RBP13.37□□□□□ -0.27
HLA-DOA-201ENST00000229829 AGLP35573 1532 aa13.37□□□□□ -0.27
HLA-DOA-201ENST00000229829 UACAQ9BZF9 1416 aa13.37□□□□□ -0.27
HLA-DOA-201ENST00000229829 PRG4Q92954 1404 aaPredicted RBP13.37□□□□□ -0.27
HLA-DOA-201ENST00000229829 DEPDC5O75140 1603 aa13.36□□□□□ -0.27
HLA-DOA-201ENST00000229829 ADGBQ8N7X0 1667 aa13.35□□□□□ -0.27
HLA-DOA-201ENST00000229829 FKBP8Q14318 412 aa13.35□□□□□ -0.27
HLA-DOA-201ENST00000229829 RNF17Q9BXT8 1623 aaKnown RBP13.35□□□□□ -0.27
HLA-DOA-201ENST00000229829 FYCO1Q9BQS8 1478 aa13.35□□□□□ -0.27
HLA-DOA-201ENST00000229829 MAGI2Q86UL8 1455 aa13.34□□□□□ -0.27
HLA-DOA-201ENST00000229829 TEX14Q8IWB6 1497 aa13.34□□□□□ -0.27
HLA-DOA-201ENST00000229829 ARHGEF5Q12774 1597 aa13.34□□□□□ -0.27
HLA-DOA-201ENST00000229829 CCDC18Q5T9S5 1454 aa13.33□□□□□ -0.27
HLA-DOA-201ENST00000229829 NUP153P49790 1475 aaKnown RBP13.33□□□□□ -0.28
HLA-DOA-201ENST00000229829 CAMSAP2Q08AD1 1489 aa13.32□□□□□ -0.28
HLA-DOA-201ENST00000229829 CARMIL2Q6F5E8 1435 aa13.31□□□□□ -0.28
HLA-DOA-201ENST00000229829 PPP1R15AO75807 674 aaPredicted RBP13.31□□□□□ -0.28
HLA-DOA-201ENST00000229829 NEFLP07196 543 aa13.29□□□□□ -0.28
HLA-DOA-201ENST00000229829 DAXXQ9UER7 740 aaPredicted RBP13.29□□□□□ -0.28
HLA-DOA-201ENST00000229829 CASKIN1Q8WXD9 1431 aa13.29□□□□□ -0.28
HLA-DOA-201ENST00000229829 KDM6BO15054 1643 aa13.29□□□□□ -0.28
HLA-DOA-201ENST00000229829 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.29□□□□□ -0.28
HLA-DOA-201ENST00000229829 RBM19Q9Y4C8 960 aaKnown RBP13.26□□□□□ -0.29
HLA-DOA-201ENST00000229829 PTPRKQ15262 1439 aa13.26□□□□□ -0.29
HLA-DOA-201ENST00000229829 ABCC1P33527 1531 aa13.26□□□□□ -0.29
HLA-DOA-201ENST00000229829 FGD6Q6ZV73 1430 aa13.25□□□□□ -0.29
HLA-DOA-201ENST00000229829 ARHGEF12Q9NZN5 1544 aa13.25□□□□□ -0.29
HLA-DOA-201ENST00000229829 KDM5DQ9BY66 1539 aa13.25□□□□□ -0.29
HLA-DOA-201ENST00000229829 TRIM52Q96A61 297 aa13.24□□□□□ -0.29
HLA-DOA-201ENST00000229829 TIMELESSQ9UNS1 1208 aa13.24□□□□□ -0.29
HLA-DOA-201ENST00000229829 KIF14Q15058 1648 aa13.24□□□□□ -0.29
HLA-DOA-201ENST00000229829 MTUS2Q5JR59 1369 aa13.23□□□□□ -0.29
HLA-DOA-201ENST00000229829 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.22□□□□□ -0.29
HLA-DOA-201ENST00000229829 PTPN23Q9H3S7 1636 aa13.22□□□□□ -0.29
HLA-DOA-201ENST00000229829 FMN1Q68DA7 1419 aa13.21□□□□□ -0.29
HLA-DOA-201ENST00000229829 TONSLQ96HA7 1378 aa13.21□□□□□ -0.29
HLA-DOA-201ENST00000229829 ATP10BO94823 1461 aa13.21□□□□□ -0.3
HLA-DOA-201ENST00000229829 ANO8Q9HCE9 1232 aaPredicted RBP13.21□□□□□ -0.3
HLA-DOA-201ENST00000229829 ANP32CO43423 234 aa13.19□□□□□ -0.3
HLA-DOA-201ENST00000229829 VWDEQ8N2E2 1590 aa13.19□□□□□ -0.3
HLA-DOA-201ENST00000229829 NEURL4Q96JN8 1562 aa13.19□□□□□ -0.3
HLA-DOA-201ENST00000229829 KIDINS220Q9ULH0 1771 aa13.19□□□□□ -0.3
HLA-DOA-201ENST00000229829 HECW2Q9P2P5 1572 aa13.18□□□□□ -0.3
HLA-DOA-201ENST00000229829 EHBP1L1Q8N3D4 1523 aa13.18□□□□□ -0.3
HLA-DOA-201ENST00000229829 PREX1Q8TCU6 1659 aa13.17□□□□□ -0.3
HLA-DOA-201ENST00000229829 HFM1A2PYH4 1435 aa13.17□□□□□ -0.3
HLA-DOA-201ENST00000229829 NCOA2Q15596 1464 aa13.17□□□□□ -0.3
HLA-DOA-201ENST00000229829 CCDC136Q96JN2 1154 aa13.17□□□□□ -0.3
HLA-DOA-201ENST00000229829 CHIC2Q9UKJ5 165 aa13.16□□□□□ -0.3
HLA-DOA-201ENST00000229829 NAIPQ13075 1403 aa13.16□□□□□ -0.3
HLA-DOA-201ENST00000229829 ASXL2Q76L83 1435 aa13.16□□□□□ -0.3
HLA-DOA-201ENST00000229829 RRP7BPQ9NSQ0 103 aa13.16□□□□□ -0.3
HLA-DOA-201ENST00000229829 CCER2I3L3R5 266 aa13.15□□□□□ -0.3
HLA-DOA-201ENST00000229829 NBR1Q14596 966 aa13.15□□□□□ -0.3
HLA-DOA-201ENST00000229829 DIP2CQ9Y2E4 1556 aa13.15□□□□□ -0.3
HLA-DOA-201ENST00000229829 MYOM3Q5VTT5 1437 aa13.14□□□□□ -0.31
HLA-DOA-201ENST00000229829 ABCA6Q8N139 1617 aa13.14□□□□□ -0.31
HLA-DOA-201ENST00000229829 ARID3CA6NKF2 412 aa13.12□□□□□ -0.31
HLA-DOA-201ENST00000229829 IRX6P78412 446 aaPredicted RBP13.12□□□□□ -0.31
HLA-DOA-201ENST00000229829 MLH3Q9UHC1 1453 aa13.12□□□□□ -0.31
HLA-DOA-201ENST00000229829 TCOF1Q13428 1488 aaKnown RBP13.12□□□□□ -0.31
HLA-DOA-201ENST00000229829 SAMD9LQ8IVG5 1584 aa13.12□□□□□ -0.31
HLA-DOA-201ENST00000229829 DEKP35659 375 aaKnown RBP13.11□□□□□ -0.31
HLA-DOA-201ENST00000229829 SHANK2Q9UPX8 1470 aa13.1□□□□□ -0.31
HLA-DOA-201ENST00000229829 SUPT6HQ7KZ85 1726 aaKnown RBP13.1□□□□□ -0.31
HLA-DOA-201ENST00000229829 MROH1Q8NDA8 1641 aa13.1□□□□□ -0.31
HLA-DOA-201ENST00000229829 MSH5O43196 834 aa13.09□□□□□ -0.31
HLA-DOA-201ENST00000229829 LMTK2Q8IWU2 1503 aa13.08□□□□□ -0.32
HLA-DOA-201ENST00000229829 FOXD1Q16676 465 aa13.07□□□□□ -0.32
HLA-DOA-201ENST00000229829 DENND4BO75064 1496 aaPredicted RBP13.07□□□□□ -0.32
HLA-DOA-201ENST00000229829 IQSEC2Q5JU85 1478 aa13.07□□□□□ -0.32
HLA-DOA-201ENST00000229829 KIAA1107Q9UPP5 1409 aa13.07□□□□□ -0.32
HLA-DOA-201ENST00000229829 LMTK3Q96Q04 1460 aa13.06□□□□□ -0.32
HLA-DOA-201ENST00000229829 HSPA5P11021 654 aaKnown RBP13.06□□□□□ -0.32
HLA-DOA-201ENST00000229829 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.06□□□□□ -0.32
HLA-DOA-201ENST00000229829 WASHC2AQ641Q2 1341 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms