RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 RAPGEF6Q8TEU7 1601 aa24.56■■□□□ 1.52
GAPDH-201ENST00000229239 CDK13Q14004 1512 aaKnown RBP24.55■■□□□ 1.52
GAPDH-201ENST00000229239 KDM6BO15054 1643 aa24.55■■□□□ 1.52
GAPDH-201ENST00000229239 ATP10BO94823 1461 aa24.55■■□□□ 1.52
GAPDH-201ENST00000229239 KCNH8Q96L42 1107 aa24.53■■□□□ 1.52
GAPDH-201ENST00000229239 TIMELESSQ9UNS1 1208 aa24.53■■□□□ 1.52
GAPDH-201ENST00000229239 NUP153P49790 1475 aaKnown RBP24.52■■□□□ 1.52
GAPDH-201ENST00000229239 PTPRKQ15262 1439 aa24.5■■□□□ 1.51
GAPDH-201ENST00000229239 AKNAQ7Z591 1439 aa24.5■■□□□ 1.51
GAPDH-201ENST00000229239 CDK11AQ9UQ88 783 aaPredicted RBP24.49■■□□□ 1.51
GAPDH-201ENST00000229239 NAIPQ13075 1403 aa24.46■■□□□ 1.51
GAPDH-201ENST00000229239 ACIN1Q9UKV3 1341 aaKnown RBP24.45■■□□□ 1.5
GAPDH-201ENST00000229239 TEX14Q8IWB6 1497 aa24.41■■□□□ 1.5
GAPDH-201ENST00000229239 CD109Q6YHK3 1445 aa24.4■■□□□ 1.5
GAPDH-201ENST00000229239 GCC2Q8IWJ2 1684 aa24.39■■□□□ 1.49
GAPDH-201ENST00000229239 COL17A1Q9UMD9 1497 aaPredicted RBP24.38■■□□□ 1.49
GAPDH-201ENST00000229239 TROQ12816 1431 aaPredicted RBP24.38■■□□□ 1.49
GAPDH-201ENST00000229239 PLEKHD1A6NEE1 506 aa24.37■■□□□ 1.49
GAPDH-201ENST00000229239 ABCA9Q8IUA7 1624 aa24.32■■□□□ 1.48
GAPDH-201ENST00000229239 CENPBP07199 599 aaPredicted RBP24.32■■□□□ 1.48
GAPDH-201ENST00000229239 ROCK1Q13464 1354 aa24.32■■□□□ 1.48
GAPDH-201ENST00000229239 ITSN2Q9NZM3 1697 aa24.3■■□□□ 1.48
GAPDH-201ENST00000229239 DNMT1P26358 1616 aaKnown RBP24.29■■□□□ 1.48
GAPDH-201ENST00000229239 DAPK1P53355 1430 aa24.27■■□□□ 1.48
GAPDH-201ENST00000229239 SIN3AQ96ST3 1273 aa24.27■■□□□ 1.48
GAPDH-201ENST00000229239 AEBP2Q6ZN18 517 aaPredicted RBP24.24■■□□□ 1.47
GAPDH-201ENST00000229239 NEUROD1Q13562 356 aa24.24■■□□□ 1.47
GAPDH-201ENST00000229239 MIER1Q8N108 512 aa24.24■■□□□ 1.47
GAPDH-201ENST00000229239 ABCC5O15440 1437 aa24.22■■□□□ 1.47
GAPDH-201ENST00000229239 GPATCH8Q9UKJ3 1502 aaKnown RBP24.2■■□□□ 1.46
GAPDH-201ENST00000229239 RRP7BPQ9NSQ0 103 aa24.2■■□□□ 1.46
GAPDH-201ENST00000229239 PPP1R15AO75807 674 aaPredicted RBP24.19■■□□□ 1.46
GAPDH-201ENST00000229239 TONSLQ96HA7 1378 aa24.18■■□□□ 1.46
GAPDH-201ENST00000229239 CHIC2Q9UKJ5 165 aa24.18■■□□□ 1.46
GAPDH-201ENST00000229239 ARAP3Q8WWN8 1544 aa24.18■■□□□ 1.46
GAPDH-201ENST00000229239 CAMSAP2Q08AD1 1489 aa24.16■■□□□ 1.46
GAPDH-201ENST00000229239 KIF14Q15058 1648 aa24.16■■□□□ 1.46
GAPDH-201ENST00000229239 CFDP1Q9UEE9 299 aaPredicted RBP24.15■■□□□ 1.46
GAPDH-201ENST00000229239 KDM4FA0A1W2PPD8 638 aa24.15■■□□□ 1.46
GAPDH-201ENST00000229239 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.13■■□□□ 1.451e-323■■■□□ 18.8
GAPDH-201ENST00000229239 NEO1Q92859 1461 aa24.13■■□□□ 1.45
GAPDH-201ENST00000229239 ADGRL2O95490 1459 aa24.11■■□□□ 1.45
GAPDH-201ENST00000229239 TTC37Q6PGP7 1564 aa24.11■■□□□ 1.45
GAPDH-201ENST00000229239 ADGBQ8N7X0 1667 aa24.09■■□□□ 1.45
GAPDH-201ENST00000229239 ZNF644Q9H582 1327 aaPredicted RBP24.09■■□□□ 1.45
GAPDH-201ENST00000229239 DENND4BO75064 1496 aaPredicted RBP24.08■■□□□ 1.45
GAPDH-201ENST00000229239 TRIM52Q96A61 297 aa24.08■■□□□ 1.45
GAPDH-201ENST00000229239 CROCC2H7BZ55 1655 aa24.07■■□□□ 1.44
GAPDH-201ENST00000229239 RAPGEF3O95398 923 aa24.06■■□□□ 1.44
GAPDH-201ENST00000229239 MPHOSPH9Q99550 1183 aa24.06■■□□□ 1.44
GAPDH-201ENST00000229239 FANCAO15360 1455 aa24.05■■□□□ 1.44
GAPDH-201ENST00000229239 SCAF1Q9H7N4 1312 aaKnown RBP24.05■■□□□ 1.44
GAPDH-201ENST00000229239 SHANK2Q9UPX8 1470 aa24.05■■□□□ 1.44
GAPDH-201ENST00000229239 PLCH2O75038 1416 aa24.04■■□□□ 1.44
GAPDH-201ENST00000229239 CDC42BPAQ5VT25 1732 aa24.04■■□□□ 1.44
GAPDH-201ENST00000229239 ADGRL1O94910 1474 aa24.04■■□□□ 1.44
GAPDH-201ENST00000229239 NCOA1Q15788 1441 aa24.04■■□□□ 1.44
GAPDH-201ENST00000229239 FRMPD1Q5SYB0 1578 aa24.03■■□□□ 1.44
GAPDH-201ENST00000229239 CFAP74Q9C0B2 1584 aa24.01■■□□□ 1.43
GAPDH-201ENST00000229239 ANKRD30AQ9BXX3 1397 aa24■■□□□ 1.43
GAPDH-201ENST00000229239 EFCAB2Q5VUJ9 269 aa23.98■■□□□ 1.43
GAPDH-201ENST00000229239 RICTORQ6R327 1708 aa23.98■■□□□ 1.43
GAPDH-201ENST00000229239 ARHGEF5Q12774 1597 aa23.96■■□□□ 1.43
GAPDH-201ENST00000229239 MYO5CQ9NQX4 1742 aa23.96■■□□□ 1.43
GAPDH-201ENST00000229239 ZNF777Q9ULD5 760 aaPredicted RBP23.94■■□□□ 1.42
GAPDH-201ENST00000229239 ANKRD30BQ9BXX2 1392 aa23.94■■□□□ 1.42
GAPDH-201ENST00000229239 PREX2Q70Z35 1606 aa23.92■■□□□ 1.42
GAPDH-201ENST00000229239 RPRD2Q5VT52 1461 aaKnown RBP23.91■■□□□ 1.42
GAPDH-201ENST00000229239 SCAPERQ9BY12 1400 aa23.91■■□□□ 1.42
GAPDH-201ENST00000229239 RSPH4AQ5TD94 716 aa23.9■■□□□ 1.42
GAPDH-201ENST00000229239 C9orf84Q5VXU9 1444 aa23.9■■□□□ 1.42
GAPDH-201ENST00000229239 ARHGAP5Q13017 1502 aa23.89■■□□□ 1.41
GAPDH-201ENST00000229239 YTHDC1Q96MU7 727 aaKnown RBP23.89■■□□□ 1.41
GAPDH-201ENST00000229239 PZPP20742 1482 aa23.89■■□□□ 1.41
GAPDH-201ENST00000229239 ZMYM4Q5VZL5 1548 aa23.88■■□□□ 1.41
GAPDH-201ENST00000229239 SLC4A1APQ9BWU0 796 aaKnown RBP23.87■■□□□ 1.41
GAPDH-201ENST00000229239 ANKRD50Q9ULJ7 1429 aa23.87■■□□□ 1.41
GAPDH-201ENST00000229239 TSPY4P0CV99 314 aa23.86■■□□□ 1.41
GAPDH-201ENST00000229239 TSPY10P0CW01 314 aa23.86■■□□□ 1.41
GAPDH-201ENST00000229239 ARHGEF40Q8TER5 1519 aa23.86■■□□□ 1.41
GAPDH-201ENST00000229239 MBD5Q9P267 1494 aa23.86■■□□□ 1.41
GAPDH-201ENST00000229239 CDC42BPBQ9Y5S2 1711 aa23.85■■□□□ 1.41
GAPDH-201ENST00000229239 CCDC141Q6ZP82 1450 aa23.84■■□□□ 1.41
GAPDH-201ENST00000229239 POGZQ7Z3K3 1410 aa23.83■■□□□ 1.41
GAPDH-201ENST00000229239 SAMD9LQ8IVG5 1584 aa23.83■■□□□ 1.41
GAPDH-201ENST00000229239 KDM5DQ9BY66 1539 aa23.83■■□□□ 1.4
GAPDH-201ENST00000229239 KIAA1107Q9UPP5 1409 aa23.83■■□□□ 1.4
GAPDH-201ENST00000229239 PLEKHH2Q8IVE3 1493 aa23.81■■□□□ 1.4
GAPDH-201ENST00000229239 ADAMTSL3P82987 1691 aa23.79■■□□□ 1.4
GAPDH-201ENST00000229239 DDX10Q13206 875 aaKnown RBP23.79■■□□□ 1.4
GAPDH-201ENST00000229239 AFAP1Q8N556 730 aa23.79■■□□□ 1.4
GAPDH-201ENST00000229239 L3MBTL2Q969R5 705 aa23.79■■□□□ 1.4
GAPDH-201ENST00000229239 MAST1Q9Y2H9 1570 aa23.79■■□□□ 1.4
GAPDH-201ENST00000229239 MAGI2Q86UL8 1455 aa23.78■■□□□ 1.4
GAPDH-201ENST00000229239 GTF3C3Q9Y5Q9 886 aa23.78■■□□□ 1.4
GAPDH-201ENST00000229239 BCORL1Q5H9F3 1711 aa23.77■■□□□ 1.4
GAPDH-201ENST00000229239 ZFYVE16Q7Z3T8 1539 aa23.77■■□□□ 1.4
GAPDH-201ENST00000229239 FOXD1Q16676 465 aa23.77■■□□□ 1.4
GAPDH-201ENST00000229239 ARID4BQ4LE39 1312 aaPredicted RBP23.77■■□□□ 1.4
GAPDH-201ENST00000229239 YEATS2Q9ULM3 1422 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms