RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 EFCAB2Q5VUJ9 269 aa16.94■□□□□ 0.3
CTSC-201ENST00000227266 CDC42BPAQ5VT25 1732 aa16.93■□□□□ 0.3
CTSC-201ENST00000227266 ITSN2Q9NZM3 1697 aa16.92■□□□□ 0.3
CTSC-201ENST00000227266 PREX2Q70Z35 1606 aa16.92■□□□□ 0.3
CTSC-201ENST00000227266 MYO5CQ9NQX4 1742 aa16.91■□□□□ 0.3
CTSC-201ENST00000227266 FANCAO15360 1455 aa16.9■□□□□ 0.3
CTSC-201ENST00000227266 PTPN23Q9H3S7 1636 aa16.9■□□□□ 0.3
CTSC-201ENST00000227266 ITGAEP38570 1179 aa16.9■□□□□ 0.3
CTSC-201ENST00000227266 CAMSAP2Q08AD1 1489 aa16.89■□□□□ 0.29
CTSC-201ENST00000227266 MAP3K4Q9Y6R4 1608 aa16.89■□□□□ 0.29
CTSC-201ENST00000227266 CDC42BPBQ9Y5S2 1711 aa16.88■□□□□ 0.29
CTSC-201ENST00000227266 ARAP3Q8WWN8 1544 aa16.88■□□□□ 0.29
CTSC-201ENST00000227266 TCOF1Q13428 1488 aaKnown RBP16.88■□□□□ 0.29
CTSC-201ENST00000227266 PCGF6Q9BYE7 350 aa16.88■□□□□ 0.29
CTSC-201ENST00000227266 HNRNPMP52272 730 aaKnown RBP eCLIP16.86■□□□□ 0.29
CTSC-201ENST00000227266 KIF13AQ9H1H9 1805 aa16.86■□□□□ 0.29
CTSC-201ENST00000227266 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.85■□□□□ 0.298e-9■□□□□ 8.6
CTSC-201ENST00000227266 SAMD9LQ8IVG5 1584 aa16.85■□□□□ 0.29
CTSC-201ENST00000227266 AKNAQ7Z591 1439 aa16.84■□□□□ 0.29
CTSC-201ENST00000227266 PLEKHH2Q8IVE3 1493 aa16.83■□□□□ 0.28
CTSC-201ENST00000227266 ADGRL1O94910 1474 aa16.82■□□□□ 0.28
CTSC-201ENST00000227266 TEX14Q8IWB6 1497 aa16.82■□□□□ 0.28
CTSC-201ENST00000227266 SYCP2Q9BX26 1530 aa16.82■□□□□ 0.28
CTSC-201ENST00000227266 NEO1Q92859 1461 aa16.82■□□□□ 0.28
CTSC-201ENST00000227266 KIAA1107Q9UPP5 1409 aa16.81■□□□□ 0.28
CTSC-201ENST00000227266 TSPOAP1O95153 1857 aa16.81■□□□□ 0.28
CTSC-201ENST00000227266 SCAPERQ9BY12 1400 aa16.81■□□□□ 0.28
CTSC-201ENST00000227266 ABCC1P33527 1531 aa16.8■□□□□ 0.28
CTSC-201ENST00000227266 ARHGEF12Q9NZN5 1544 aa16.8■□□□□ 0.28
CTSC-201ENST00000227266 MBD5Q9P267 1494 aa16.8■□□□□ 0.28
CTSC-201ENST00000227266 CFAP74Q9C0B2 1584 aa16.79■□□□□ 0.28
CTSC-201ENST00000227266 CHIC2Q9UKJ5 165 aa16.79■□□□□ 0.28
CTSC-201ENST00000227266 ABCC5O15440 1437 aa16.79■□□□□ 0.28
CTSC-201ENST00000227266 DAPK1P53355 1430 aa16.78■□□□□ 0.28
CTSC-201ENST00000227266 PPRC1Q5VV67 1664 aaKnown RBP16.78■□□□□ 0.28
CTSC-201ENST00000227266 PTPRKQ15262 1439 aa16.77■□□□□ 0.28
CTSC-201ENST00000227266 TRAPPC8Q9Y2L5 1435 aa16.77■□□□□ 0.28
CTSC-201ENST00000227266 TSPY4P0CV99 314 aa16.77■□□□□ 0.28
CTSC-201ENST00000227266 TSPY10P0CW01 314 aa16.77■□□□□ 0.28
CTSC-201ENST00000227266 RSPH4AQ5TD94 716 aa16.77■□□□□ 0.28
CTSC-201ENST00000227266 AFAP1Q8N556 730 aa16.77■□□□□ 0.28
CTSC-201ENST00000227266 CCDC141Q6ZP82 1450 aa16.76■□□□□ 0.27
CTSC-201ENST00000227266 RAPGEF3O95398 923 aa16.75■□□□□ 0.27
CTSC-201ENST00000227266 DNMT1P26358 1616 aaKnown RBP16.75■□□□□ 0.27
CTSC-201ENST00000227266 ARHGEF5Q12774 1597 aa16.74■□□□□ 0.27
CTSC-201ENST00000227266 DENND4BO75064 1496 aaPredicted RBP16.74■□□□□ 0.27
CTSC-201ENST00000227266 MYT1LQ9UL68 1186 aa16.72■□□□□ 0.27
CTSC-201ENST00000227266 POGZQ7Z3K3 1410 aa16.72■□□□□ 0.27
CTSC-201ENST00000227266 C9orf84Q5VXU9 1444 aa16.72■□□□□ 0.27
CTSC-201ENST00000227266 SPAG9O60271 1321 aaKnown RBP16.72■□□□□ 0.27
CTSC-201ENST00000227266 ZNF518AQ6AHZ1 1483 aa16.71■□□□□ 0.27
CTSC-201ENST00000227266 RRP7BPQ9NSQ0 103 aa16.7■□□□□ 0.26
CTSC-201ENST00000227266 SHANK2Q9UPX8 1470 aa16.69■□□□□ 0.26
CTSC-201ENST00000227266 COL17A1Q9UMD9 1497 aaPredicted RBP16.68■□□□□ 0.26
CTSC-201ENST00000227266 ANKRD30AQ9BXX3 1397 aa16.67■□□□□ 0.26
CTSC-201ENST00000227266 CROCC2H7BZ55 1655 aa16.66■□□□□ 0.26
CTSC-201ENST00000227266 ROCK1Q13464 1354 aa16.66■□□□□ 0.26
CTSC-201ENST00000227266 NCOA1Q15788 1441 aa16.65■□□□□ 0.26
CTSC-201ENST00000227266 ADGRL2O95490 1459 aa16.64■□□□□ 0.25
CTSC-201ENST00000227266 KDM5CP41229 1560 aa16.64■□□□□ 0.25
CTSC-201ENST00000227266 RTEL1-TNFRSF6BF6WH68 1400 aa16.63■□□□□ 0.25
CTSC-201ENST00000227266 KIF15Q9NS87 1388 aa16.63■□□□□ 0.25
CTSC-201ENST00000227266 HFM1A2PYH4 1435 aa16.63■□□□□ 0.25
CTSC-201ENST00000227266 FRMPD1Q5SYB0 1578 aa16.63■□□□□ 0.25
CTSC-201ENST00000227266 MAST1Q9Y2H9 1570 aa16.63■□□□□ 0.25
CTSC-201ENST00000227266 ATP7AQ04656 1500 aa16.62■□□□□ 0.25
CTSC-201ENST00000227266 ZFYVE16Q7Z3T8 1539 aa16.62■□□□□ 0.25
CTSC-201ENST00000227266 RICTORQ6R327 1708 aa16.62■□□□□ 0.25
CTSC-201ENST00000227266 NAIPQ13075 1403 aa16.62■□□□□ 0.25
CTSC-201ENST00000227266 MLH3Q9UHC1 1453 aa16.61■□□□□ 0.25
CTSC-201ENST00000227266 SETD5Q9C0A6 1442 aa16.61■□□□□ 0.25
CTSC-201ENST00000227266 INO80Q9ULG1 1556 aaPredicted RBP16.6■□□□□ 0.25
CTSC-201ENST00000227266 HECW2Q9P2P5 1572 aa16.59■□□□□ 0.25
CTSC-201ENST00000227266 KDM6BO15054 1643 aa16.59■□□□□ 0.25
CTSC-201ENST00000227266 ADGBQ8N7X0 1667 aa16.59■□□□□ 0.25
CTSC-201ENST00000227266 YEATS2Q9ULM3 1422 aa16.58■□□□□ 0.24
CTSC-201ENST00000227266 ZMYM4Q5VZL5 1548 aa16.58■□□□□ 0.24
CTSC-201ENST00000227266 RAB3GAP2Q9H2M9 1393 aa16.58■□□□□ 0.24
CTSC-201ENST00000227266 PLXNC1O60486 1568 aa16.57■□□□□ 0.24
CTSC-201ENST00000227266 KIDINS220Q9ULH0 1771 aa16.57■□□□□ 0.24
CTSC-201ENST00000227266 ANKRD50Q9ULJ7 1429 aa16.56■□□□□ 0.24
CTSC-201ENST00000227266 MAGI2Q86UL8 1455 aa16.56■□□□□ 0.24
CTSC-201ENST00000227266 DUOX2Q9NRD8 1548 aa16.54■□□□□ 0.24
CTSC-201ENST00000227266 DHX29Q7Z478 1369 aaKnown RBP16.53■□□□□ 0.24
CTSC-201ENST00000227266 ABCA6Q8N139 1617 aa16.53■□□□□ 0.24
CTSC-201ENST00000227266 A2MP01023 1474 aa16.52■□□□□ 0.24
CTSC-201ENST00000227266 GCC2Q8IWJ2 1684 aa16.52■□□□□ 0.24
CTSC-201ENST00000227266 DIP2CQ9Y2E4 1556 aa16.52■□□□□ 0.24
CTSC-201ENST00000227266 HRCP23327 699 aa16.51■□□□□ 0.23
CTSC-201ENST00000227266 ERBINQ96RT1 1412 aa16.5■□□□□ 0.23
CTSC-201ENST00000227266 ATP10AO60312 1499 aa16.5■□□□□ 0.23
CTSC-201ENST00000227266 TRIM52Q96A61 297 aa16.5■□□□□ 0.23
CTSC-201ENST00000227266 KIF3BO15066 747 aa16.49■□□□□ 0.23
CTSC-201ENST00000227266 ARHGEF40Q8TER5 1519 aa16.49■□□□□ 0.23
CTSC-201ENST00000227266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.47■□□□□ 0.23
CTSC-201ENST00000227266 GGT6Q6P531 493 aa16.44■□□□□ 0.22
CTSC-201ENST00000227266 ARID4BQ4LE39 1312 aaPredicted RBP16.44■□□□□ 0.22
CTSC-201ENST00000227266 NUP155O75694 1391 aa16.44■□□□□ 0.22
CTSC-201ENST00000227266 ACIN1Q9UKV3 1341 aaKnown RBP16.42■□□□□ 0.22
CTSC-201ENST00000227266 MLECQ14165 292 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms