RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 PTPRKQ15262 1439 aa16.79■□□□□ 0.28
TNFAIP1-201ENST00000226225 MIA2Q96PC5 1412 aa16.79■□□□□ 0.28
TNFAIP1-201ENST00000226225 FOXD1Q16676 465 aa16.79■□□□□ 0.28
TNFAIP1-201ENST00000226225 LRRIQ1Q96JM4 1722 aa16.79■□□□□ 0.28
TNFAIP1-201ENST00000226225 DHX57Q6P158 1386 aaKnown RBP16.79■□□□□ 0.28
TNFAIP1-201ENST00000226225 SLC4A1APQ9BWU0 796 aaKnown RBP16.78■□□□□ 0.28
TNFAIP1-201ENST00000226225 ABCC2Q92887 1545 aa16.78■□□□□ 0.28
TNFAIP1-201ENST00000226225 GPATCH8Q9UKJ3 1502 aaKnown RBP16.78■□□□□ 0.28
TNFAIP1-201ENST00000226225 PTPN23Q9H3S7 1636 aa16.76■□□□□ 0.27
TNFAIP1-201ENST00000226225 AFAP1Q8N556 730 aa16.75■□□□□ 0.27
TNFAIP1-201ENST00000226225 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.74■□□□□ 0.27
TNFAIP1-201ENST00000226225 KIF14Q15058 1648 aa16.74■□□□□ 0.27
TNFAIP1-201ENST00000226225 ARHGAP5Q13017 1502 aa16.74■□□□□ 0.27
TNFAIP1-201ENST00000226225 SHROOM2Q13796 1616 aa16.72■□□□□ 0.27
TNFAIP1-201ENST00000226225 FAM69CQ0P6D2 419 aa16.72■□□□□ 0.27
TNFAIP1-201ENST00000226225 ANKRD30AQ9BXX3 1397 aa16.71■□□□□ 0.27
TNFAIP1-201ENST00000226225 DAPK1P53355 1430 aa16.71■□□□□ 0.27
TNFAIP1-201ENST00000226225 ABCC5O15440 1437 aa16.7■□□□□ 0.26
TNFAIP1-201ENST00000226225 CAMSAP2Q08AD1 1489 aa16.7■□□□□ 0.26
TNFAIP1-201ENST00000226225 ASXL2Q76L83 1435 aa16.7■□□□□ 0.26
TNFAIP1-201ENST00000226225 BCANQ96GW7 911 aa16.7■□□□□ 0.26
TNFAIP1-201ENST00000226225 MPHOSPH9Q99550 1183 aa16.69■□□□□ 0.26
TNFAIP1-201ENST00000226225 NAIPQ13075 1403 aa16.68■□□□□ 0.26
TNFAIP1-201ENST00000226225 SPAG9O60271 1321 aaKnown RBP16.68■□□□□ 0.26
TNFAIP1-201ENST00000226225 RSPH4AQ5TD94 716 aa16.67■□□□□ 0.26
TNFAIP1-201ENST00000226225 HFM1A2PYH4 1435 aa16.67■□□□□ 0.26
TNFAIP1-201ENST00000226225 ZNF326Q5BKZ1 582 aaKnown RBP16.66■□□□□ 0.26
TNFAIP1-201ENST00000226225 TRHP20396 242 aaPredicted RBP16.65■□□□□ 0.26
TNFAIP1-201ENST00000226225 KDM5BQ9UGL1 1544 aa16.64■□□□□ 0.25
TNFAIP1-201ENST00000226225 TONSLQ96HA7 1378 aa16.64■□□□□ 0.25
TNFAIP1-201ENST00000226225 CLSPNQ9HAW4 1339 aa16.64■□□□□ 0.25
TNFAIP1-201ENST00000226225 WDR7Q9Y4E6 1490 aa16.64■□□□□ 0.25
TNFAIP1-201ENST00000226225 NUP155O75694 1391 aa16.63■□□□□ 0.25
TNFAIP1-201ENST00000226225 KIF15Q9NS87 1388 aa16.63■□□□□ 0.25
TNFAIP1-201ENST00000226225 PKD2Q13563 968 aa16.63■□□□□ 0.25
TNFAIP1-201ENST00000226225 UHRF1BP1LA0JNW5 1464 aa16.62■□□□□ 0.25
TNFAIP1-201ENST00000226225 C9orf84Q5VXU9 1444 aa16.62■□□□□ 0.25
TNFAIP1-201ENST00000226225 SUPT16HQ9Y5B9 1047 aaKnown RBP16.62■□□□□ 0.25
TNFAIP1-201ENST00000226225 TCOF1Q13428 1488 aaKnown RBP16.62■□□□□ 0.25
TNFAIP1-201ENST00000226225 ABCC10Q5T3U5 1492 aa16.62■□□□□ 0.25
TNFAIP1-201ENST00000226225 RAPGEF3O95398 923 aa16.6■□□□□ 0.25
TNFAIP1-201ENST00000226225 PLCH2O75038 1416 aa16.59■□□□□ 0.25
TNFAIP1-201ENST00000226225 CD109Q6YHK3 1445 aa16.59■□□□□ 0.25
TNFAIP1-201ENST00000226225 ANKRD50Q9ULJ7 1429 aa16.59■□□□□ 0.25
TNFAIP1-201ENST00000226225 ZCCHC11Q5TAX3 1644 aaKnown RBP16.59■□□□□ 0.25
TNFAIP1-201ENST00000226225 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.59■□□□□ 0.25
TNFAIP1-201ENST00000226225 NCOA1Q15788 1441 aa16.58■□□□□ 0.25
TNFAIP1-201ENST00000226225 HIRIP3Q9BW71 556 aaPredicted RBP16.58■□□□□ 0.25
TNFAIP1-201ENST00000226225 KIF3BO15066 747 aa16.58■□□□□ 0.24
TNFAIP1-201ENST00000226225 SCAPERQ9BY12 1400 aa16.58■□□□□ 0.24
TNFAIP1-201ENST00000226225 ADCY10Q96PN6 1610 aa16.57■□□□□ 0.24
TNFAIP1-201ENST00000226225 AKNAQ7Z591 1439 aa16.57■□□□□ 0.24
TNFAIP1-201ENST00000226225 GGT6Q6P531 493 aa16.56■□□□□ 0.24
TNFAIP1-201ENST00000226225 FANCAO15360 1455 aa16.55■□□□□ 0.24
TNFAIP1-201ENST00000226225 TTC37Q6PGP7 1564 aa16.55■□□□□ 0.24
TNFAIP1-201ENST00000226225 ROCK1Q13464 1354 aa16.54■□□□□ 0.24
TNFAIP1-201ENST00000226225 RGL3Q3MIN7 710 aa16.54■□□□□ 0.24
TNFAIP1-201ENST00000226225 KDM2AQ9Y2K7 1162 aa16.54■□□□□ 0.24
TNFAIP1-201ENST00000226225 CCDC141Q6ZP82 1450 aa16.54■□□□□ 0.24
TNFAIP1-201ENST00000226225 SYCP2Q9BX26 1530 aa16.54■□□□□ 0.24
TNFAIP1-201ENST00000226225 ITSN2Q9NZM3 1697 aa16.54■□□□□ 0.24
TNFAIP1-201ENST00000226225 TRAPPC8Q9Y2L5 1435 aa16.52■□□□□ 0.24
TNFAIP1-201ENST00000226225 ADGRL1O94910 1474 aa16.5■□□□□ 0.23
TNFAIP1-201ENST00000226225 TSHZ2Q9NRE2 1034 aa16.5■□□□□ 0.23
TNFAIP1-201ENST00000226225 PLEKHH2Q8IVE3 1493 aa16.5■□□□□ 0.23
TNFAIP1-201ENST00000226225 MLECQ14165 292 aa16.49■□□□□ 0.23
TNFAIP1-201ENST00000226225 CHGAP10645 457 aaKnown RBP16.47■□□□□ 0.23
TNFAIP1-201ENST00000226225 MBD5Q9P267 1494 aa16.47■□□□□ 0.23
TNFAIP1-201ENST00000226225 DNMT1P26358 1616 aaKnown RBP16.47■□□□□ 0.23
TNFAIP1-201ENST00000226225 CDC42BPAQ5VT25 1732 aa16.47■□□□□ 0.23
TNFAIP1-201ENST00000226225 PLPPR3Q6T4P5 718 aa16.46■□□□□ 0.23
TNFAIP1-201ENST00000226225 POLR3GLQ9BT43 218 aa16.46■□□□□ 0.23
TNFAIP1-201ENST00000226225 L3MBTL2Q969R5 705 aa16.46■□□□□ 0.23
TNFAIP1-201ENST00000226225 RIMBP3CA6NJZ7 1639 aa16.45■□□□□ 0.22
TNFAIP1-201ENST00000226225 RIMBP3BA6NNM3 1639 aa16.45■□□□□ 0.22
TNFAIP1-201ENST00000226225 RIMBP3Q9UFD9 1639 aa16.45■□□□□ 0.22
TNFAIP1-201ENST00000226225 PPP1R15AO75807 674 aaPredicted RBP16.44■□□□□ 0.22
TNFAIP1-201ENST00000226225 SAMD9LQ8IVG5 1584 aa16.44■□□□□ 0.22
TNFAIP1-201ENST00000226225 KIAA1107Q9UPP5 1409 aa16.44■□□□□ 0.22
TNFAIP1-201ENST00000226225 ANP32EQ9BTT0 268 aa16.44■□□□□ 0.22
TNFAIP1-201ENST00000226225 SENP3Q9H4L4 574 aaPredicted RBP16.43■□□□□ 0.22
TNFAIP1-201ENST00000226225 ARID4BQ4LE39 1312 aaPredicted RBP16.43■□□□□ 0.22
TNFAIP1-201ENST00000226225 ARHGEF12Q9NZN5 1544 aa16.42■□□□□ 0.22
TNFAIP1-201ENST00000226225 MAPKBP1O60336 1514 aa16.42■□□□□ 0.22
TNFAIP1-201ENST00000226225 KDM6BO15054 1643 aa16.42■□□□□ 0.22
TNFAIP1-201ENST00000226225 BCL11AQ9H165 835 aa16.41■□□□□ 0.22
TNFAIP1-201ENST00000226225 DCAF11Q8TEB1 546 aa16.4■□□□□ 0.22
TNFAIP1-201ENST00000226225 PREX2Q70Z35 1606 aa16.4■□□□□ 0.22
TNFAIP1-201ENST00000226225 MYO5CQ9NQX4 1742 aa16.4■□□□□ 0.22
TNFAIP1-201ENST00000226225 ESF1Q9H501 851 aaKnown RBP16.39■□□□□ 0.21
TNFAIP1-201ENST00000226225 TIMELESSQ9UNS1 1208 aa16.39■□□□□ 0.21
TNFAIP1-201ENST00000226225 KANK1Q14678 1352 aa16.39■□□□□ 0.21
TNFAIP1-201ENST00000226225 FKBP8Q14318 412 aa16.39■□□□□ 0.21
TNFAIP1-201ENST00000226225 CDC42BPBQ9Y5S2 1711 aa16.39■□□□□ 0.21
TNFAIP1-201ENST00000226225 WASHC2CQ9Y4E1 1318 aa16.38■□□□□ 0.21
TNFAIP1-201ENST00000226225 CNGB1Q14028 1251 aaPredicted RBP16.38■□□□□ 0.21
TNFAIP1-201ENST00000226225 ADGRL2O95490 1459 aa16.34■□□□□ 0.21
TNFAIP1-201ENST00000226225 SHANK2Q9UPX8 1470 aa16.34■□□□□ 0.21
TNFAIP1-201ENST00000226225 DDX10Q13206 875 aaKnown RBP16.33■□□□□ 0.21
TNFAIP1-201ENST00000226225 DENND4BO75064 1496 aaPredicted RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms