RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 MPHOSPH9Q99550 1183 aa21.21■□□□□ 0.99
VTN-201ENST00000226218 B4GALNT3Q6L9W6 998 aa21.2■□□□□ 0.98
VTN-201ENST00000226218 NESP48681 1621 aa21.19■□□□□ 0.98
VTN-201ENST00000226218 MRS2Q9HD23 443 aa21.19■□□□□ 0.98
VTN-201ENST00000226218 GAPVD1Q14C86 1478 aa21.18■□□□□ 0.98
VTN-201ENST00000226218 ANKRD30BQ9BXX2 1392 aa21.18■□□□□ 0.98
VTN-201ENST00000226218 FAM9BQ8IZU0 186 aa21.18■□□□□ 0.98
VTN-201ENST00000226218 CHIC2Q9UKJ5 165 aa21.17■□□□□ 0.98
VTN-201ENST00000226218 SMG6Q86US8 1419 aaKnown RBP21.16■□□□□ 0.98
VTN-201ENST00000226218 NBPF8Q3BBV2 869 aa21.16■□□□□ 0.98
VTN-201ENST00000226218 EPRSP07814 1512 aaKnown RBP21.15■□□□□ 0.98
VTN-201ENST00000226218 KIF7Q2M1P5 1343 aa21.14■□□□□ 0.98
VTN-201ENST00000226218 RNF123Q5XPI4 1314 aa21.13■□□□□ 0.97
VTN-201ENST00000226218 ROCK1Q13464 1354 aa21.12■□□□□ 0.97
VTN-201ENST00000226218 TDRD9Q8NDG6 1382 aaKnown RBP21.12■□□□□ 0.97
VTN-201ENST00000226218 DNMT1P26358 1616 aaKnown RBP21.11■□□□□ 0.97
VTN-201ENST00000226218 WDR62O43379 1518 aa21.11■□□□□ 0.97
VTN-201ENST00000226218 DHX29Q7Z478 1369 aaKnown RBP21.09■□□□□ 0.97
VTN-201ENST00000226218 CDK13Q14004 1512 aaKnown RBP21.09■□□□□ 0.97
VTN-201ENST00000226218 NOP58Q9Y2X3 529 aaKnown RBP21.08■□□□□ 0.97
VTN-201ENST00000226218 DEKP35659 375 aaKnown RBP21.08■□□□□ 0.96
VTN-201ENST00000226218 FOXD1Q16676 465 aa21.08■□□□□ 0.96
VTN-201ENST00000226218 DAPK1P53355 1430 aa21.08■□□□□ 0.96
VTN-201ENST00000226218 MBD5Q9P267 1494 aa21.07■□□□□ 0.96
VTN-201ENST00000226218 BCORL1Q5H9F3 1711 aa21.07■□□□□ 0.96
VTN-201ENST00000226218 IQGAP2Q13576 1575 aa21.05■□□□□ 0.96
VTN-201ENST00000226218 TARBP1Q13395 1621 aaKnown RBP21.05■□□□□ 0.96
VTN-201ENST00000226218 NUDCQ9Y266 331 aa21.03■□□□□ 0.96
VTN-201ENST00000226218 ABCC5O15440 1437 aa21.03■□□□□ 0.96
VTN-201ENST00000226218 PBRM1Q86U86 1689 aa21.03■□□□□ 0.96
VTN-201ENST00000226218 PAK3O75914 559 aaPredicted RBP21.02■□□□□ 0.96
VTN-201ENST00000226218 PZPP20742 1482 aa21■□□□□ 0.95
VTN-201ENST00000226218 KIF14Q15058 1648 aa21■□□□□ 0.95
VTN-201ENST00000226218 KDM5CP41229 1560 aa20.99■□□□□ 0.95
VTN-201ENST00000226218 ADAMTS12P58397 1594 aa20.95■□□□□ 0.94
VTN-201ENST00000226218 ADGBQ8N7X0 1667 aa20.95■□□□□ 0.94
VTN-201ENST00000226218 ARID4BQ4LE39 1312 aaPredicted RBP20.93■□□□□ 0.94
VTN-201ENST00000226218 IPO9Q96P70 1041 aaKnown RBP20.92■□□□□ 0.94
VTN-201ENST00000226218 USP47Q96K76 1375 aa20.91■□□□□ 0.94
VTN-201ENST00000226218 SLC4A1APQ9BWU0 796 aaKnown RBP20.91■□□□□ 0.94
VTN-201ENST00000226218 CCDC136Q96JN2 1154 aa20.9■□□□□ 0.94
VTN-201ENST00000226218 PNISRQ8TF01 805 aaKnown RBP20.89■□□□□ 0.93
VTN-201ENST00000226218 CROCC2H7BZ55 1655 aa20.88■□□□□ 0.93
VTN-201ENST00000226218 LRPPRCP42704 1394 aaKnown RBP20.87■□□□□ 0.93
VTN-201ENST00000226218 NBR1Q14596 966 aa20.87■□□□□ 0.93
VTN-201ENST00000226218 ANP32AP39687 249 aaKnown RBP20.87■□□□□ 0.93
VTN-201ENST00000226218 E9PCH4 1651 aa20.87■□□□□ 0.93
VTN-201ENST00000226218 KIAA1107Q9UPP5 1409 aa20.87■□□□□ 0.93
VTN-201ENST00000226218 UHRF1BP1Q6BDS2 1440 aa20.86■□□□□ 0.93
VTN-201ENST00000226218 PDS5BQ9NTI5 1447 aa20.85■□□□□ 0.93
VTN-201ENST00000226218 KIAA0556O60303 1618 aa20.85■□□□□ 0.93
VTN-201ENST00000226218 ADGRL2O95490 1459 aa20.85■□□□□ 0.93
VTN-201ENST00000226218 NUP153P49790 1475 aaKnown RBP20.85■□□□□ 0.93
VTN-201ENST00000226218 RALGAPBQ86X10 1494 aa20.85■□□□□ 0.93
VTN-201ENST00000226218 ZNF644Q9H582 1327 aaPredicted RBP20.85■□□□□ 0.93
VTN-201ENST00000226218 ROCK2O75116 1388 aaKnown RBP20.85■□□□□ 0.93
VTN-201ENST00000226218 ITSN2Q9NZM3 1697 aa20.84■□□□□ 0.93
VTN-201ENST00000226218 RAPGEF6Q8TEU7 1601 aa20.83■□□□□ 0.93
VTN-201ENST00000226218 CAMSAP2Q08AD1 1489 aa20.82■□□□□ 0.92
VTN-201ENST00000226218 DISP1Q96F81 1524 aa20.81■□□□□ 0.92
VTN-201ENST00000226218 ZBTB47Q9UFB7 747 aaPredicted RBP20.79■□□□□ 0.92
VTN-201ENST00000226218 ADCY10Q96PN6 1610 aa20.78■□□□□ 0.92
VTN-201ENST00000226218 ARHGEF12Q9NZN5 1544 aa20.78■□□□□ 0.92
VTN-201ENST00000226218 KIF15Q9NS87 1388 aa20.78■□□□□ 0.92
VTN-201ENST00000226218 BRD4O60885 1362 aaPredicted RBP20.77■□□□□ 0.92
VTN-201ENST00000226218 KTN1Q86UP2 1357 aaKnown RBP20.77■□□□□ 0.92
VTN-201ENST00000226218 ARID3CA6NKF2 412 aa20.77■□□□□ 0.91
VTN-201ENST00000226218 RRP1P56182 461 aaKnown RBP20.74■□□□□ 0.91
VTN-201ENST00000226218 TMC1Q8TDI8 760 aa20.74■□□□□ 0.91
VTN-201ENST00000226218 TROQ12816 1431 aaPredicted RBP20.73■□□□□ 0.91
VTN-201ENST00000226218 GPATCH8Q9UKJ3 1502 aaKnown RBP20.72■□□□□ 0.91
VTN-201ENST00000226218 KIAA0586Q9BVV6 1533 aa20.72■□□□□ 0.91
VTN-201ENST00000226218 MYBBP1AQ9BQG0 1328 aaKnown RBP20.72■□□□□ 0.91
VTN-201ENST00000226218 KDM5DQ9BY66 1539 aa20.71■□□□□ 0.91
VTN-201ENST00000226218 TCERG1O14776 1098 aaKnown RBP20.71■□□□□ 0.91
VTN-201ENST00000226218 RTL5Q5HYW3 569 aaPredicted RBP20.71■□□□□ 0.91
VTN-201ENST00000226218 CEP170Q5SW79 1584 aa20.7■□□□□ 0.9
VTN-201ENST00000226218 PKD2Q13563 968 aa20.7■□□□□ 0.9
VTN-201ENST00000226218 POLR3GLQ9BT43 218 aa20.7■□□□□ 0.9
VTN-201ENST00000226218 CNGB1Q14028 1251 aaPredicted RBP20.69■□□□□ 0.9
VTN-201ENST00000226218 RALBP1Q15311 655 aa20.69■□□□□ 0.9
VTN-201ENST00000226218 PRG4Q92954 1404 aaPredicted RBP20.68■□□□□ 0.9
VTN-201ENST00000226218 EXOC6Q8TAG9 804 aa20.68■□□□□ 0.9
VTN-201ENST00000226218 CDC42BPAQ5VT25 1732 aa20.68■□□□□ 0.9
VTN-201ENST00000226218 SENP3-EIF4A1A0A087X0R7 540 aa20.67■□□□□ 0.9
VTN-201ENST00000226218 ZNF326Q5BKZ1 582 aaKnown RBP20.67■□□□□ 0.9
VTN-201ENST00000226218 ANKRD50Q9ULJ7 1429 aa20.66■□□□□ 0.9
VTN-201ENST00000226218 ANKRD30AQ9BXX3 1397 aa20.65■□□□□ 0.9
VTN-201ENST00000226218 SHANK2Q9UPX8 1470 aa20.64■□□□□ 0.89
VTN-201ENST00000226218 MS4A1P11836 297 aa20.64■□□□□ 0.89
VTN-201ENST00000226218 PDE4AP27815 886 aa20.64■□□□□ 0.89
VTN-201ENST00000226218 BACH2Q9BYV9 841 aa20.64■□□□□ 0.89
VTN-201ENST00000226218 RCAN3Q9UKA8 241 aa20.64■□□□□ 0.89
VTN-201ENST00000226218 PARD3Q8TEW0 1356 aa20.64■□□□□ 0.89
VTN-201ENST00000226218 CARD11Q9BXL7 1154 aa20.63■□□□□ 0.89
VTN-201ENST00000226218 CFDP1Q9UEE9 299 aaPredicted RBP20.63■□□□□ 0.89
VTN-201ENST00000226218 PDE3BQ13370 1112 aa20.62■□□□□ 0.89
VTN-201ENST00000226218 ZMYM4Q5VZL5 1548 aa20.61■□□□□ 0.89
VTN-201ENST00000226218 TRPM1Q7Z4N2 1603 aa20.61■□□□□ 0.89
VTN-201ENST00000226218 PTPRGP23470 1445 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms