RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 C14orf37Q86TY3 774 aa12.81□□□□□ -0.36
CCL1-201ENST00000225842 PEG3Q9GZU2 1588 aa12.79□□□□□ -0.36
CCL1-201ENST00000225842 SOX12O15370 315 aa12.78□□□□□ -0.36
CCL1-201ENST00000225842 MAP3K13O43283 966 aa12.78□□□□□ -0.36
CCL1-201ENST00000225842 TESPA1A2RU30 521 aaPredicted RBP12.77□□□□□ -0.37
CCL1-201ENST00000225842 PAK3O75914 559 aaPredicted RBP12.77□□□□□ -0.37
CCL1-201ENST00000225842 FANCD2Q9BXW9 1451 aa12.76□□□□□ -0.37
CCL1-201ENST00000225842 NEUROD2Q15784 382 aa12.75□□□□□ -0.37
CCL1-201ENST00000225842 SLC24A3Q9HC58 644 aa12.75□□□□□ -0.37
CCL1-201ENST00000225842 KIF12Q96FN5 646 aa12.74□□□□□ -0.37
CCL1-201ENST00000225842 NCKAP5LQ9HCH0 1330 aa12.73□□□□□ -0.37
CCL1-201ENST00000225842 ARAP1Q96P48 1450 aa12.72□□□□□ -0.37
CCL1-201ENST00000225842 ILDR1Q86SU0 546 aaPredicted RBP12.72□□□□□ -0.37
CCL1-201ENST00000225842 LARP6Q9BRS8 491 aaKnown RBP12.72□□□□□ -0.37
CCL1-201ENST00000225842 PDE4AP27815 886 aa12.67□□□□□ -0.38
CCL1-201ENST00000225842 FXR2P51116 673 aaKnown RBP eCLIP12.67□□□□□ -0.38
CCL1-201ENST00000225842 ARXQ96QS3 562 aa12.67□□□□□ -0.38
CCL1-201ENST00000225842 MROH2BQ7Z745 1585 aa12.67□□□□□ -0.38
CCL1-201ENST00000225842 URB2Q14146 1524 aaKnown RBP12.67□□□□□ -0.38
CCL1-201ENST00000225842 MS4A4AQ96JQ5 239 aa12.66□□□□□ -0.38
CCL1-201ENST00000225842 ZNF608Q9ULD9 1512 aaPredicted RBP12.65□□□□□ -0.38
CCL1-201ENST00000225842 MFSD10Q14728 455 aa12.63□□□□□ -0.39
CCL1-201ENST00000225842 SMYD5Q6GMV2 418 aa12.63□□□□□ -0.39
CCL1-201ENST00000225842 ZMYND10O75800 440 aa12.62□□□□□ -0.39
CCL1-201ENST00000225842 DDX27Q96GQ7 796 aaKnown RBP12.62□□□□□ -0.39
CCL1-201ENST00000225842 RSF1Q96T23 1441 aaPredicted RBP12.62□□□□□ -0.39
CCL1-201ENST00000225842 CRISPLD2Q9H0B8 497 aa12.61□□□□□ -0.39
CCL1-201ENST00000225842 CFTRP13569 1480 aa12.6□□□□□ -0.39
CCL1-201ENST00000225842 IFT140Q96RY7 1462 aa12.6□□□□□ -0.39
CCL1-201ENST00000225842 ZRANB1Q9UGI0 708 aa12.59□□□□□ -0.39
CCL1-201ENST00000225842 GOLGA2Q08379 1002 aa12.58□□□□□ -0.4
CCL1-201ENST00000225842 PHF12Q96QT6 1004 aa12.57□□□□□ -0.4
CCL1-201ENST00000225842 TMEM106CQ9BVX2 250 aa12.55□□□□□ -0.4
CCL1-201ENST00000225842 ARIH1Q9Y4X5 557 aaPredicted RBP12.55□□□□□ -0.4
CCL1-201ENST00000225842 CAMK2BQ13554 666 aa12.54□□□□□ -0.4
CCL1-201ENST00000225842 PIP4P2Q8N4L2 257 aa12.54□□□□□ -0.4
CCL1-201ENST00000225842 BARGINQ6ZT62 677 aa12.53□□□□□ -0.4
CCL1-201ENST00000225842 RBM26Q5T8P6 1007 aaKnown RBP12.52□□□□□ -0.41
CCL1-201ENST00000225842 CD44P16070 742 aaKnown RBP12.51□□□□□ -0.41
CCL1-201ENST00000225842 MLLT3P42568 568 aaPredicted RBP12.51□□□□□ -0.41
CCL1-201ENST00000225842 MKRN3Q13064 507 aaKnown RBP12.49□□□□□ -0.41
CCL1-201ENST00000225842 HOMEZQ8IX15 550 aa12.49□□□□□ -0.41
CCL1-201ENST00000225842 TRPC6Q9Y210 931 aa12.49□□□□□ -0.41
CCL1-201ENST00000225842 AQRO60306 1485 aaKnown RBP eCLIP12.48□□□□□ -0.41
CCL1-201ENST00000225842 SUPT5HO00267 1087 aaKnown RBP12.48□□□□□ -0.41
CCL1-201ENST00000225842 CHRDL2Q6WN34 429 aa12.48□□□□□ -0.41
CCL1-201ENST00000225842 GPIHBP1Q8IV16 184 aa12.48□□□□□ -0.41
CCL1-201ENST00000225842 KRI1Q8N9T8 703 aaKnown RBP12.46□□□□□ -0.41
CCL1-201ENST00000225842 AK7Q96M32 723 aa12.46□□□□□ -0.41
CCL1-201ENST00000225842 GPBP1L1Q9HC44 474 aaPredicted RBP12.46□□□□□ -0.41
CCL1-201ENST00000225842 EIF4G3O43432 1585 aaKnown RBP12.46□□□□□ -0.42
CCL1-201ENST00000225842 PPP1R15BQ5SWA1 713 aa12.45□□□□□ -0.42
CCL1-201ENST00000225842 CHD1O14646 1710 aa12.43□□□□□ -0.42
CCL1-201ENST00000225842 WIZO95785 1651 aa12.42□□□□□ -0.42
CCL1-201ENST00000225842 MS4A3Q96HJ5 214 aa12.42□□□□□ -0.42
CCL1-201ENST00000225842 TOPBP1Q92547 1522 aa12.42□□□□□ -0.42
CCL1-201ENST00000225842 DPYSL4O14531 572 aa12.4□□□□□ -0.42
CCL1-201ENST00000225842 CHMP7Q8WUX9 453 aaPredicted RBP12.4□□□□□ -0.42
CCL1-201ENST00000225842 GPHNQ9NQX3 736 aaPredicted RBP12.4□□□□□ -0.42
CCL1-201ENST00000225842 IL27Q8NEV9 243 aa12.39□□□□□ -0.43
CCL1-201ENST00000225842 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.38□□□□□ -0.43
CCL1-201ENST00000225842 KDM4FA0A1W2PPD8 638 aa12.37□□□□□ -0.43
CCL1-201ENST00000225842 EMILIN3Q9NT22 766 aa12.37□□□□□ -0.43
CCL1-201ENST00000225842 GAPVD1Q14C86 1478 aa12.36□□□□□ -0.43
CCL1-201ENST00000225842 KDM4CQ9H3R0 1056 aa12.36□□□□□ -0.43
CCL1-201ENST00000225842 ABCC8Q09428 1581 aa12.35□□□□□ -0.43
CCL1-201ENST00000225842 DAXXQ9UER7 740 aaPredicted RBP12.35□□□□□ -0.43
CCL1-201ENST00000225842 CLASP1Q7Z460 1538 aa12.35□□□□□ -0.43
CCL1-201ENST00000225842 TRIM66O15016 1216 aa12.34□□□□□ -0.43
CCL1-201ENST00000225842 DSG2Q14126 1118 aa12.34□□□□□ -0.43
CCL1-201ENST00000225842 TDRD9Q8NDG6 1382 aaKnown RBP12.32□□□□□ -0.44
CCL1-201ENST00000225842 TTLL13PA6NNM8 815 aa12.32□□□□□ -0.44
CCL1-201ENST00000225842 PDE4DQ08499 809 aa12.32□□□□□ -0.44
CCL1-201ENST00000225842 SPDYE16A6NNV3 312 aaPredicted RBP12.31□□□□□ -0.44
CCL1-201ENST00000225842 PDIA6Q15084 440 aa12.31□□□□□ -0.44
CCL1-201ENST00000225842 DPY19L2Q6NUT2 758 aa12.31□□□□□ -0.44
CCL1-201ENST00000225842 SYNJ1O43426 1573 aa12.3□□□□□ -0.44
CCL1-201ENST00000225842 SNAPC4Q5SXM2 1469 aa12.3□□□□□ -0.44
CCL1-201ENST00000225842 TIE1P35590 1138 aa12.3□□□□□ -0.44
CCL1-201ENST00000225842 TARBP1Q13395 1621 aaKnown RBP12.29□□□□□ -0.44
CCL1-201ENST00000225842 TMC2Q8TDI7 906 aa12.27□□□□□ -0.45
CCL1-201ENST00000225842 BMP2KQ9NSY1 1161 aaPredicted RBP12.27□□□□□ -0.45
CCL1-201ENST00000225842 DNMBPQ6XZF7 1577 aa12.26□□□□□ -0.45
CCL1-201ENST00000225842 MICALL2Q8IY33 904 aa12.26□□□□□ -0.45
CCL1-201ENST00000225842 GPR37O15354 613 aa12.25□□□□□ -0.45
CCL1-201ENST00000225842 TRIM35Q9UPQ4 493 aa12.25□□□□□ -0.45
CCL1-201ENST00000225842 POLA1P09884 1462 aaPredicted RBP12.25□□□□□ -0.45
CCL1-201ENST00000225842 RAD54L2Q9Y4B4 1467 aa12.25□□□□□ -0.45
CCL1-201ENST00000225842 TOP2AP11388 1531 aaKnown RBP12.25□□□□□ -0.45
CCL1-201ENST00000225842 SOGA1O94964 1423 aa12.24□□□□□ -0.45
CCL1-201ENST00000225842 FOXK1P85037 733 aa12.23□□□□□ -0.45
CCL1-201ENST00000225842 MAGI1Q96QZ7 1491 aaPredicted RBP12.22□□□□□ -0.45
CCL1-201ENST00000225842 GRXCR2A6NFK2 248 aa12.22□□□□□ -0.45
CCL1-201ENST00000225842 PLPP6Q8IY26 295 aa12.22□□□□□ -0.45
CCL1-201ENST00000225842 NUTM2FA1L443 756 aa12.21□□□□□ -0.45
CCL1-201ENST00000225842 C19orf67A6NJJ6 358 aa12.21□□□□□ -0.45
CCL1-201ENST00000225842 FAM69CQ0P6D2 419 aa12.21□□□□□ -0.45
CCL1-201ENST00000225842 SYNJ2O15056 1496 aa12.21□□□□□ -0.46
CCL1-201ENST00000225842 FAM117AQ9C073 453 aa12.2□□□□□ -0.46
CCL1-201ENST00000225842 ZMYND15Q9H091 742 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms