RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 CHIC2Q9UKJ5 165 aa25.58■■□□□ 1.69
GCDH-201ENST00000222214 CDC42BPAQ5VT25 1732 aa25.57■■□□□ 1.68
GCDH-201ENST00000222214 RRP7BPQ9NSQ0 103 aa25.57■■□□□ 1.68
GCDH-201ENST00000222214 ABCC2Q92887 1545 aa25.56■■□□□ 1.68
GCDH-201ENST00000222214 ZNF644Q9H582 1327 aaPredicted RBP25.53■■□□□ 1.68
GCDH-201ENST00000222214 ADGBQ8N7X0 1667 aa25.53■■□□□ 1.68
GCDH-201ENST00000222214 CROCC2H7BZ55 1655 aa25.52■■□□□ 1.68
GCDH-201ENST00000222214 ERCC6L2Q5T890 1561 aa25.52■■□□□ 1.68
GCDH-201ENST00000222214 SIN3AQ96ST3 1273 aa25.5■■□□□ 1.67
GCDH-201ENST00000222214 ADGRL2O95490 1459 aa25.5■■□□□ 1.67
GCDH-201ENST00000222214 UHRF1BP1LA0JNW5 1464 aa25.49■■□□□ 1.67
GCDH-201ENST00000222214 NEUROD1Q13562 356 aa25.47■■□□□ 1.67
GCDH-201ENST00000222214 KDM6BO15054 1643 aa25.47■■□□□ 1.67
GCDH-201ENST00000222214 SHANK2Q9UPX8 1470 aa25.46■■□□□ 1.67
GCDH-201ENST00000222214 PREX2Q70Z35 1606 aa25.44■■□□□ 1.66
GCDH-201ENST00000222214 NCOA1Q15788 1441 aa25.43■■□□□ 1.66
GCDH-201ENST00000222214 ZNF777Q9ULD5 760 aaPredicted RBP25.42■■□□□ 1.66
GCDH-201ENST00000222214 TRIM52Q96A61 297 aa25.42■■□□□ 1.66
GCDH-201ENST00000222214 ARHGEF5Q12774 1597 aa25.41■■□□□ 1.66
GCDH-201ENST00000222214 TONSLQ96HA7 1378 aa25.41■■□□□ 1.66
GCDH-201ENST00000222214 ANKRD30AQ9BXX3 1397 aa25.41■■□□□ 1.66
GCDH-201ENST00000222214 PPP1R15AO75807 674 aaPredicted RBP25.38■■□□□ 1.65
GCDH-201ENST00000222214 KDM5BQ9UGL1 1544 aa25.37■■□□□ 1.65
GCDH-201ENST00000222214 CDC42BPBQ9Y5S2 1711 aa25.37■■□□□ 1.65
GCDH-201ENST00000222214 MPHOSPH9Q99550 1183 aa25.36■■□□□ 1.65
GCDH-201ENST00000222214 DENND4BO75064 1496 aaPredicted RBP25.36■■□□□ 1.65
GCDH-201ENST00000222214 ZCCHC11Q5TAX3 1644 aaKnown RBP25.36■■□□□ 1.65
GCDH-201ENST00000222214 RSPH4AQ5TD94 716 aa25.35■■□□□ 1.65
GCDH-201ENST00000222214 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.34■■□□□ 1.65
GCDH-201ENST00000222214 C9orf84Q5VXU9 1444 aa25.33■■□□□ 1.65
GCDH-201ENST00000222214 SAMD9LQ8IVG5 1584 aa25.32■■□□□ 1.64
GCDH-201ENST00000222214 MYO5CQ9NQX4 1742 aa25.32■■□□□ 1.64
GCDH-201ENST00000222214 TTC37Q6PGP7 1564 aa25.31■■□□□ 1.64
GCDH-201ENST00000222214 TSPY4P0CV99 314 aa25.31■■□□□ 1.64
GCDH-201ENST00000222214 TSPY10P0CW01 314 aa25.31■■□□□ 1.64
GCDH-201ENST00000222214 MBD5Q9P267 1494 aa25.3■■□□□ 1.64
GCDH-201ENST00000222214 CCDC141Q6ZP82 1450 aa25.29■■□□□ 1.64
GCDH-201ENST00000222214 PLEKHH2Q8IVE3 1493 aa25.29■■□□□ 1.64
GCDH-201ENST00000222214 ANKRD50Q9ULJ7 1429 aa25.27■■□□□ 1.64
GCDH-201ENST00000222214 ARHGAP5Q13017 1502 aa25.27■■□□□ 1.64
GCDH-201ENST00000222214 KIAA1107Q9UPP5 1409 aa25.24■■□□□ 1.63
GCDH-201ENST00000222214 MAST1Q9Y2H9 1570 aa25.23■■□□□ 1.63
GCDH-201ENST00000222214 ANKRD30BQ9BXX2 1392 aa25.23■■□□□ 1.63
GCDH-201ENST00000222214 SLC4A1APQ9BWU0 796 aaKnown RBP25.22■■□□□ 1.63
GCDH-201ENST00000222214 PZPP20742 1482 aa25.22■■□□□ 1.63
GCDH-201ENST00000222214 HNRNPMP52272 730 aaKnown RBP eCLIP25.2■■□□□ 1.63
GCDH-201ENST00000222214 PLCH2O75038 1416 aa25.2■■□□□ 1.62
GCDH-201ENST00000222214 SYCP2Q9BX26 1530 aa25.18■■□□□ 1.62
GCDH-201ENST00000222214 RPRD2Q5VT52 1461 aaKnown RBP25.18■■□□□ 1.62
GCDH-201ENST00000222214 MIER1Q8N108 512 aa25.18■■□□□ 1.62
GCDH-201ENST00000222214 ARAP3Q8WWN8 1544 aa25.18■■□□□ 1.62
GCDH-201ENST00000222214 KDM5DQ9BY66 1539 aa25.18■■□□□ 1.62
GCDH-201ENST00000222214 OSCARQ8IYS5 282 aa25.18■■□□□ 1.62
GCDH-201ENST00000222214 KIF15Q9NS87 1388 aa25.17■■□□□ 1.62
GCDH-201ENST00000222214 KCNH8Q96L42 1107 aa25.14■■□□□ 1.61
GCDH-201ENST00000222214 WDR7Q9Y4E6 1490 aa25.12■■□□□ 1.61
GCDH-201ENST00000222214 PLXNC1O60486 1568 aa25.12■■□□□ 1.61
GCDH-201ENST00000222214 EFCAB2Q5VUJ9 269 aa25.12■■□□□ 1.61
GCDH-201ENST00000222214 CENPBP07199 599 aaPredicted RBP25.1■■□□□ 1.61
GCDH-201ENST00000222214 FOXD1Q16676 465 aa25.09■■□□□ 1.61
GCDH-201ENST00000222214 ABCC1P33527 1531 aa25.08■■□□□ 1.6
GCDH-201ENST00000222214 NUP155O75694 1391 aa25.07■■□□□ 1.6
GCDH-201ENST00000222214 TEX14Q8IWB6 1497 aa25.05■■□□□ 1.6
GCDH-201ENST00000222214 L3MBTL2Q969R5 705 aa25.04■■□□□ 1.6
GCDH-201ENST00000222214 ABCA9Q8IUA7 1624 aa25.03■■□□□ 1.6
GCDH-201ENST00000222214 PKD2Q13563 968 aa25.03■■□□□ 1.6
GCDH-201ENST00000222214 ARHGEF12Q9NZN5 1544 aa25.02■■□□□ 1.6
GCDH-201ENST00000222214 DUOX2Q9NRD8 1548 aa25.01■■□□□ 1.59
GCDH-201ENST00000222214 UNC13BO14795 1591 aa25.01■■□□□ 1.59
GCDH-201ENST00000222214 ERBINQ96RT1 1412 aa24.98■■□□□ 1.59
GCDH-201ENST00000222214 ASXL2Q76L83 1435 aa24.96■■□□□ 1.59
GCDH-201ENST00000222214 FAM135AQ9P2D6 1515 aa24.96■■□□□ 1.59
GCDH-201ENST00000222214 RTEL1-TNFRSF6BF6WH68 1400 aa24.96■■□□□ 1.59
GCDH-201ENST00000222214 NPM1P06748 294 aaKnown RBP eCLIP24.93■■□□□ 1.58
GCDH-201ENST00000222214 FANCAO15360 1455 aa24.92■■□□□ 1.58
GCDH-201ENST00000222214 TRAPPC8Q9Y2L5 1435 aa24.91■■□□□ 1.58
GCDH-201ENST00000222214 IQGAP3Q86VI3 1631 aa24.91■■□□□ 1.58
GCDH-201ENST00000222214 EIF4G2P78344 907 aaKnown RBP eCLIP24.9■■□□□ 1.58
GCDH-201ENST00000222214 MAGI2Q86UL8 1455 aa24.9■■□□□ 1.58
GCDH-201ENST00000222214 DDX10Q13206 875 aaKnown RBP24.89■■□□□ 1.57
GCDH-201ENST00000222214 SPAG9O60271 1321 aaKnown RBP24.87■■□□□ 1.57
GCDH-201ENST00000222214 ZFYVE16Q7Z3T8 1539 aa24.86■■□□□ 1.57
GCDH-201ENST00000222214 HIRIP3Q9BW71 556 aaPredicted RBP24.85■■□□□ 1.57
GCDH-201ENST00000222214 HSPA5P11021 654 aaKnown RBP24.84■■□□□ 1.57
GCDH-201ENST00000222214 NBPF8Q3BBV2 869 aa24.82■■□□□ 1.56
GCDH-201ENST00000222214 ADGRL1O94910 1474 aa24.82■■□□□ 1.56
GCDH-201ENST00000222214 CFAP74Q9C0B2 1584 aa24.82■■□□□ 1.56
GCDH-201ENST00000222214 INO80Q9ULG1 1556 aaPredicted RBP24.82■■□□□ 1.56
GCDH-201ENST00000222214 UHRF1BP1Q6BDS2 1440 aa24.81■■□□□ 1.56
GCDH-201ENST00000222214 YTHDC1Q96MU7 727 aaKnown RBP24.8■■□□□ 1.56
GCDH-201ENST00000222214 ATP7AQ04656 1500 aa24.8■■□□□ 1.56
GCDH-201ENST00000222214 CCDC144AA2RUR9 1427 aa24.77■■□□□ 1.56
GCDH-201ENST00000222214 SCAPERQ9BY12 1400 aa24.77■■□□□ 1.56
GCDH-201ENST00000222214 ATP10AO60312 1499 aa24.77■■□□□ 1.56
GCDH-201ENST00000222214 AFAP1Q8N556 730 aa24.76■■□□□ 1.55
GCDH-201ENST00000222214 SPATA31E1Q6ZUB1 1445 aa24.75■■□□□ 1.55
GCDH-201ENST00000222214 DEPDC5O75140 1603 aa24.74■■□□□ 1.55
GCDH-201ENST00000222214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.73■■□□□ 1.55
GCDH-201ENST00000222214 EIF2AK4Q9P2K8 1649 aaKnown RBP24.73■■□□□ 1.55
GCDH-201ENST00000222214 ANP32CO43423 234 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms