RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 ARID4BQ4LE39 1312 aaPredicted RBP25.9■■□□□ 1.74
LIM2-201ENST00000221973 CASKIN1Q8WXD9 1431 aa25.9■■□□□ 1.74
LIM2-201ENST00000221973 PCF11O94913 1555 aaKnown RBP25.9■■□□□ 1.74
LIM2-201ENST00000221973 POGZQ7Z3K3 1410 aa25.89■■□□□ 1.74
LIM2-201ENST00000221973 SCAPERQ9BY12 1400 aa25.89■■□□□ 1.74
LIM2-201ENST00000221973 TROQ12816 1431 aaPredicted RBP25.88■■□□□ 1.73
LIM2-201ENST00000221973 ZFYVE16Q7Z3T8 1539 aa25.88■■□□□ 1.73
LIM2-201ENST00000221973 MAGI2Q86UL8 1455 aa25.87■■□□□ 1.73
LIM2-201ENST00000221973 ILDR1Q86SU0 546 aaPredicted RBP25.87■■□□□ 1.73
LIM2-201ENST00000221973 CDK11AQ9UQ88 783 aaPredicted RBP25.87■■□□□ 1.73
LIM2-201ENST00000221973 MYO5CQ9NQX4 1742 aa25.87■■□□□ 1.73
LIM2-201ENST00000221973 FYCO1Q9BQS8 1478 aa25.85■■□□□ 1.73
LIM2-201ENST00000221973 EFCAB2Q5VUJ9 269 aa25.84■■□□□ 1.73
LIM2-201ENST00000221973 RIMS1Q86UR5 1692 aaKnown RBP25.81■■□□□ 1.72
LIM2-201ENST00000221973 LMTK3Q96Q04 1460 aa25.76■■□□□ 1.71
LIM2-201ENST00000221973 ARHGAP5Q13017 1502 aa25.75■■□□□ 1.71
LIM2-201ENST00000221973 CDC42BPBQ9Y5S2 1711 aa25.74■■□□□ 1.71
LIM2-201ENST00000221973 ATP10AO60312 1499 aa25.74■■□□□ 1.71
LIM2-201ENST00000221973 CCDC18Q5T9S5 1454 aa25.74■■□□□ 1.71
LIM2-201ENST00000221973 KDM5CP41229 1560 aa25.73■■□□□ 1.71
LIM2-201ENST00000221973 AFAP1Q8N556 730 aa25.73■■□□□ 1.71
LIM2-201ENST00000221973 ZNF518AQ6AHZ1 1483 aa25.72■■□□□ 1.71
LIM2-201ENST00000221973 C9orf84Q5VXU9 1444 aa25.71■■□□□ 1.71
LIM2-201ENST00000221973 APLP2Q06481 763 aa25.7■■□□□ 1.7
LIM2-201ENST00000221973 MLECQ14165 292 aa25.69■■□□□ 1.7
LIM2-201ENST00000221973 PREX2Q70Z35 1606 aa25.69■■□□□ 1.7
LIM2-201ENST00000221973 ARHGEF12Q9NZN5 1544 aa25.68■■□□□ 1.7
LIM2-201ENST00000221973 FER1L4A9Z1Z3 1794 aa25.67■■□□□ 1.7
LIM2-201ENST00000221973 ABCC1P33527 1531 aa25.64■■□□□ 1.7
LIM2-201ENST00000221973 DIP2CQ9Y2E4 1556 aa25.64■■□□□ 1.69
LIM2-201ENST00000221973 TRAPPC8Q9Y2L5 1435 aa25.63■■□□□ 1.69
LIM2-201ENST00000221973 CDC42BPAQ5VT25 1732 aa25.63■■□□□ 1.69
LIM2-201ENST00000221973 MLH3Q9UHC1 1453 aa25.62■■□□□ 1.69
LIM2-201ENST00000221973 PLPPR3Q6T4P5 718 aa25.61■■□□□ 1.69
LIM2-201ENST00000221973 TIAM1Q13009 1591 aa25.61■■□□□ 1.69
LIM2-201ENST00000221973 ABCA6Q8N139 1617 aa25.6■■□□□ 1.69
LIM2-201ENST00000221973 MAP3K1Q13233 1512 aa25.59■■□□□ 1.69
LIM2-201ENST00000221973 ITSN2Q9NZM3 1697 aa25.59■■□□□ 1.69
LIM2-201ENST00000221973 REREQ9P2R6 1566 aa25.59■■□□□ 1.69
LIM2-201ENST00000221973 HSPA2P54652 639 aa25.58■■□□□ 1.69
LIM2-201ENST00000221973 MTUS2Q5JR59 1369 aa25.57■■□□□ 1.68
LIM2-201ENST00000221973 KANK4Q5T7N3 995 aaPredicted RBP25.57■■□□□ 1.68
LIM2-201ENST00000221973 GPATCH8Q9UKJ3 1502 aaKnown RBP25.54■■□□□ 1.68
LIM2-201ENST00000221973 SAMD9LQ8IVG5 1584 aa25.53■■□□□ 1.68
LIM2-201ENST00000221973 CEBPAP49715 358 aaPredicted RBP25.53■■□□□ 1.68
LIM2-201ENST00000221973 KIDINS220Q9ULH0 1771 aa25.53■■□□□ 1.68
LIM2-201ENST00000221973 LRRC9Q6ZRR7 1453 aa25.53■■□□□ 1.68
LIM2-201ENST00000221973 PPARGC1BQ86YN6 1023 aaKnown RBP25.52■■□□□ 1.68
LIM2-201ENST00000221973 AGLP35573 1532 aa25.51■■□□□ 1.67
LIM2-201ENST00000221973 MYT1LQ9UL68 1186 aa25.5■■□□□ 1.67
LIM2-201ENST00000221973 EHBP1L1Q8N3D4 1523 aa25.48■■□□□ 1.67
LIM2-201ENST00000221973 FBXO41Q8TF61 875 aa25.47■■□□□ 1.67
LIM2-201ENST00000221973 SYCP2Q9BX26 1530 aa25.47■■□□□ 1.67
LIM2-201ENST00000221973 ZNF777Q9ULD5 760 aaPredicted RBP25.46■■□□□ 1.67
LIM2-201ENST00000221973 PREX1Q8TCU6 1659 aa25.45■■□□□ 1.67
LIM2-201ENST00000221973 HNRNPMP52272 730 aaKnown RBP eCLIP25.44■■□□□ 1.66
LIM2-201ENST00000221973 KIAA1107Q9UPP5 1409 aa25.42■■□□□ 1.66
LIM2-201ENST00000221973 C3P01024 1663 aa25.4■■□□□ 1.66
LIM2-201ENST00000221973 CFDP1Q9UEE9 299 aaPredicted RBP25.4■■□□□ 1.66
LIM2-201ENST00000221973 CCNB3Q8WWL7 1395 aa25.4■■□□□ 1.66
LIM2-201ENST00000221973 SETD1BQ9UPS6 1966 aaKnown RBP25.38■■□□□ 1.65
LIM2-201ENST00000221973 SPAG9O60271 1321 aaKnown RBP25.37■■□□□ 1.65
LIM2-201ENST00000221973 NCOA2Q15596 1464 aa25.37■■□□□ 1.65
LIM2-201ENST00000221973 PLEKHH2Q8IVE3 1493 aa25.36■■□□□ 1.65
LIM2-201ENST00000221973 INO80Q9ULG1 1556 aaPredicted RBP25.35■■□□□ 1.65
LIM2-201ENST00000221973 ATP7AQ04656 1500 aa25.35■■□□□ 1.65
LIM2-201ENST00000221973 SUPT6HQ7KZ85 1726 aaKnown RBP25.34■■□□□ 1.65
LIM2-201ENST00000221973 STRCQ7RTU9 1775 aa25.34■■□□□ 1.65
LIM2-201ENST00000221973 UHRF1BP1Q6BDS2 1440 aa25.34■■□□□ 1.65
LIM2-201ENST00000221973 ZNF644Q9H582 1327 aaPredicted RBP25.34■■□□□ 1.65
LIM2-201ENST00000221973 PLXNC1O60486 1568 aa25.32■■□□□ 1.64
LIM2-201ENST00000221973 MBD5Q9P267 1494 aa25.31■■□□□ 1.64
LIM2-201ENST00000221973 CNTLNQ9NXG0 1405 aa25.3■■□□□ 1.64
LIM2-201ENST00000221973 A2MP01023 1474 aa25.28■■□□□ 1.64
LIM2-201ENST00000221973 ESF1Q9H501 851 aaKnown RBP25.27■■□□□ 1.64
LIM2-201ENST00000221973 MROH2AA6NES4 1674 aa25.26■■□□□ 1.63
LIM2-201ENST00000221973 CERKQ8TCT0 537 aa25.25■■□□□ 1.63
LIM2-201ENST00000221973 ZMYM3Q14202 1370 aa25.23■■□□□ 1.63
LIM2-201ENST00000221973 NPATQ14207 1427 aa25.21■■□□□ 1.63
LIM2-201ENST00000221973 MYOM3Q5VTT5 1437 aa25.21■■□□□ 1.63
LIM2-201ENST00000221973 ADGBQ8N7X0 1667 aa25.2■■□□□ 1.63
LIM2-201ENST00000221973 CLTCQ00610 1675 aaKnown RBP25.19■■□□□ 1.62
LIM2-201ENST00000221973 RTEL1-TNFRSF6BF6WH68 1400 aa25.19■■□□□ 1.62
LIM2-201ENST00000221973 DMRT2Q9Y5R5 561 aa25.18■■□□□ 1.62
LIM2-201ENST00000221973 PTPRTO14522 1441 aa25.16■■□□□ 1.62
LIM2-201ENST00000221973 NCOA1Q15788 1441 aa25.15■■□□□ 1.62
LIM2-201ENST00000221973 GGT6Q6P531 493 aa25.15■■□□□ 1.62
LIM2-201ENST00000221973 CAMSAP2Q08AD1 1489 aa25.15■■□□□ 1.62
LIM2-201ENST00000221973 PTPRKQ15262 1439 aa25.13■■□□□ 1.61
LIM2-201ENST00000221973 DHX29Q7Z478 1369 aaKnown RBP25.13■■□□□ 1.61
LIM2-201ENST00000221973 FGD6Q6ZV73 1430 aa25.12■■□□□ 1.61
LIM2-201ENST00000221973 MIA2Q96PC5 1412 aa25.12■■□□□ 1.61
LIM2-201ENST00000221973 CCDC141Q6ZP82 1450 aa25.12■■□□□ 1.61
LIM2-201ENST00000221973 PPP6R1Q9UPN7 881 aa25.11■■□□□ 1.61
LIM2-201ENST00000221973 CAMSAP1Q5T5Y3 1602 aa25.09■■□□□ 1.61
LIM2-201ENST00000221973 MYO3AQ8NEV4 1616 aa25.08■■□□□ 1.6
LIM2-201ENST00000221973 FAM50AQ14320 339 aaKnown RBP25.07■■□□□ 1.6
LIM2-201ENST00000221973 ZNF142P52746 1687 aaPredicted RBP25.07■■□□□ 1.6
LIM2-201ENST00000221973 ARHGEF5Q12774 1597 aa25.06■■□□□ 1.6
LIM2-201ENST00000221973 LTBP4Q8N2S1 1624 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms