RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 ANKRD30BQ9BXX2 1392 aa18.52■□□□□ 0.55
SRP54-201ENST00000216774 NUP153P49790 1475 aaKnown RBP18.52■□□□□ 0.55
SRP54-201ENST00000216774 RAPGEF6Q8TEU7 1601 aa18.51■□□□□ 0.55
SRP54-201ENST00000216774 L3MBTL2Q969R5 705 aa18.51■□□□□ 0.55
SRP54-201ENST00000216774 NCOA1Q15788 1441 aa18.5■□□□□ 0.55
SRP54-201ENST00000216774 ZNF608Q9ULD9 1512 aaPredicted RBP18.49■□□□□ 0.55
SRP54-201ENST00000216774 TEX14Q8IWB6 1497 aa18.48■□□□□ 0.55
SRP54-201ENST00000216774 CDK11AQ9UQ88 783 aaPredicted RBP18.48■□□□□ 0.55
SRP54-201ENST00000216774 GRIN2AQ12879 1464 aa18.46■□□□□ 0.55
SRP54-201ENST00000216774 HNRNPUQ00839 825 aaKnown RBP eCLIP18.46■□□□□ 0.55
SRP54-201ENST00000216774 CCDC7Q96M83 1385 aa18.45■□□□□ 0.54
SRP54-201ENST00000216774 ARID3CA6NKF2 412 aa18.45■□□□□ 0.54
SRP54-201ENST00000216774 FOXD1Q16676 465 aa18.43■□□□□ 0.54
SRP54-201ENST00000216774 ITSN2Q9NZM3 1697 aa18.43■□□□□ 0.54
SRP54-201ENST00000216774 TROQ12816 1431 aaPredicted RBP18.42■□□□□ 0.54
SRP54-201ENST00000216774 POLR1AO95602 1720 aaPredicted RBP18.42■□□□□ 0.54
SRP54-201ENST00000216774 SPATA31E1Q6ZUB1 1445 aa18.41■□□□□ 0.54
SRP54-201ENST00000216774 EIF4G3O43432 1585 aaKnown RBP18.41■□□□□ 0.54
SRP54-201ENST00000216774 ZNF644Q9H582 1327 aaPredicted RBP18.41■□□□□ 0.54
SRP54-201ENST00000216774 ADGBQ8N7X0 1667 aa18.4■□□□□ 0.54
SRP54-201ENST00000216774 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
SRP54-201ENST00000216774 CAMSAP2Q08AD1 1489 aa18.39■□□□□ 0.54
SRP54-201ENST00000216774 ADCY10Q96PN6 1610 aa18.39■□□□□ 0.54
SRP54-201ENST00000216774 NBPF8Q3BBV2 869 aa18.39■□□□□ 0.53
SRP54-201ENST00000216774 ANP32EQ9BTT0 268 aa18.39■□□□□ 0.53
SRP54-201ENST00000216774 PZPP20742 1482 aa18.38■□□□□ 0.53
SRP54-201ENST00000216774 C11orf95C9JLR9 678 aaPredicted RBP18.38■□□□□ 0.53
SRP54-201ENST00000216774 PRKRIP1Q9H875 184 aaPredicted RBP18.38■□□□□ 0.53
SRP54-201ENST00000216774 ADGRL2O95490 1459 aa18.38■□□□□ 0.53
SRP54-201ENST00000216774 MAGI1Q96QZ7 1491 aaPredicted RBP18.38■□□□□ 0.53
SRP54-201ENST00000216774 ERICH6BQ5W0A0 696 aa18.37■□□□□ 0.53
SRP54-201ENST00000216774 PRG4Q92954 1404 aaPredicted RBP18.36■□□□□ 0.53
SRP54-201ENST00000216774 RBM19Q9Y4C8 960 aaKnown RBP18.35■□□□□ 0.53
SRP54-201ENST00000216774 GPATCH8Q9UKJ3 1502 aaKnown RBP18.35■□□□□ 0.53
SRP54-201ENST00000216774 CROCC2H7BZ55 1655 aa18.35■□□□□ 0.53
SRP54-201ENST00000216774 CFDP1Q9UEE9 299 aaPredicted RBP18.34■□□□□ 0.53
SRP54-201ENST00000216774 MBD5Q9P267 1494 aa18.34■□□□□ 0.53
SRP54-201ENST00000216774 KIF7Q2M1P5 1343 aa18.34■□□□□ 0.53
SRP54-201ENST00000216774 KIAA1107Q9UPP5 1409 aa18.32■□□□□ 0.52
SRP54-201ENST00000216774 SYNJ2O15056 1496 aa18.32■□□□□ 0.52
SRP54-201ENST00000216774 CEP170Q5SW79 1584 aa18.32■□□□□ 0.52
SRP54-201ENST00000216774 CCDC184Q52MB2 194 aa18.31■□□□□ 0.52
SRP54-201ENST00000216774 PLB1Q6P1J6 1458 aa18.31■□□□□ 0.52
SRP54-201ENST00000216774 KIF14Q15058 1648 aa18.31■□□□□ 0.52
SRP54-201ENST00000216774 ZBED9Q6R2W3 1325 aa18.3■□□□□ 0.52
SRP54-201ENST00000216774 CARMIL2Q6F5E8 1435 aa18.29■□□□□ 0.52
SRP54-201ENST00000216774 ANKRD30AQ9BXX3 1397 aa18.29■□□□□ 0.52
SRP54-201ENST00000216774 MRS2Q9HD23 443 aa18.29■□□□□ 0.52
SRP54-201ENST00000216774 SHANK2Q9UPX8 1470 aa18.26■□□□□ 0.51
SRP54-201ENST00000216774 CHMP7Q8WUX9 453 aaPredicted RBP18.26■□□□□ 0.51
SRP54-201ENST00000216774 NUP160Q12769 1436 aa18.26■□□□□ 0.51
SRP54-201ENST00000216774 ARID4BQ4LE39 1312 aaPredicted RBP18.26■□□□□ 0.51
SRP54-201ENST00000216774 ANKRD50Q9ULJ7 1429 aa18.24■□□□□ 0.51
SRP54-201ENST00000216774 FAM9BQ8IZU0 186 aa18.24■□□□□ 0.51
SRP54-201ENST00000216774 PPP4R2Q9NY27 417 aa18.23■□□□□ 0.51
SRP54-201ENST00000216774 USP47Q96K76 1375 aa18.23■□□□□ 0.51
SRP54-201ENST00000216774 UHRF1BP1Q6BDS2 1440 aa18.22■□□□□ 0.51
SRP54-201ENST00000216774 DHX29Q7Z478 1369 aaKnown RBP18.22■□□□□ 0.51
SRP54-201ENST00000216774 KDM5CP41229 1560 aa18.22■□□□□ 0.51
SRP54-201ENST00000216774 PKD2Q13563 968 aa18.21■□□□□ 0.51
SRP54-201ENST00000216774 ABCA8O94911 1581 aa18.21■□□□□ 0.51
SRP54-201ENST00000216774 CDC42BPAQ5VT25 1732 aa18.21■□□□□ 0.51
SRP54-201ENST00000216774 IRX6P78412 446 aaPredicted RBP18.21■□□□□ 0.51
SRP54-201ENST00000216774 KDM5DQ9BY66 1539 aa18.21■□□□□ 0.51
SRP54-201ENST00000216774 ARHGEF12Q9NZN5 1544 aa18.21■□□□□ 0.51
SRP54-201ENST00000216774 ABCC10Q5T3U5 1492 aa18.21■□□□□ 0.5
SRP54-201ENST00000216774 ZNF777Q9ULD5 760 aaPredicted RBP18.2■□□□□ 0.5
SRP54-201ENST00000216774 JPH4Q96JJ6 628 aa18.2■□□□□ 0.5
SRP54-201ENST00000216774 ERCC6Q03468 1493 aa18.2■□□□□ 0.5
SRP54-201ENST00000216774 BCORL1Q5H9F3 1711 aa18.19■□□□□ 0.5
SRP54-201ENST00000216774 RALGAPBQ86X10 1494 aa18.19■□□□□ 0.5
SRP54-201ENST00000216774 C9orf84Q5VXU9 1444 aa18.18■□□□□ 0.5
SRP54-201ENST00000216774 ROCK2O75116 1388 aaKnown RBP18.17■□□□□ 0.5
SRP54-201ENST00000216774 PLEKHD1A6NEE1 506 aa18.17■□□□□ 0.5
SRP54-201ENST00000216774 FANCIQ9NVI1 1328 aa18.17■□□□□ 0.5
SRP54-201ENST00000216774 ATP10BO94823 1461 aa18.15■□□□□ 0.5
SRP54-201ENST00000216774 SMG6Q86US8 1419 aaKnown RBP18.14■□□□□ 0.49
SRP54-201ENST00000216774 NUP155O75694 1391 aa18.14■□□□□ 0.49
SRP54-201ENST00000216774 ARHGEF5Q12774 1597 aa18.14■□□□□ 0.49
SRP54-201ENST00000216774 PTPRGP23470 1445 aa18.13■□□□□ 0.49
SRP54-201ENST00000216774 FBLN2P98095 1184 aa18.12■□□□□ 0.49
SRP54-201ENST00000216774 ZNF326Q5BKZ1 582 aaKnown RBP18.11■□□□□ 0.49
SRP54-201ENST00000216774 TSPY4P0CV99 314 aa18.11■□□□□ 0.49
SRP54-201ENST00000216774 TSPY10P0CW01 314 aa18.11■□□□□ 0.49
SRP54-201ENST00000216774 KIF15Q9NS87 1388 aa18.09■□□□□ 0.49
SRP54-201ENST00000216774 KTN1Q86UP2 1357 aaKnown RBP18.07■□□□□ 0.48
SRP54-201ENST00000216774 CARD11Q9BXL7 1154 aa18.07■□□□□ 0.48
SRP54-201ENST00000216774 MSH5O43196 834 aa18.05■□□□□ 0.48
SRP54-201ENST00000216774 NUDCQ9Y266 331 aa18.05■□□□□ 0.48
SRP54-201ENST00000216774 RNF123Q5XPI4 1314 aa18.05■□□□□ 0.48
SRP54-201ENST00000216774 CCDC141Q6ZP82 1450 aa18.05■□□□□ 0.48
SRP54-201ENST00000216774 POLR3GLQ9BT43 218 aa18.04■□□□□ 0.48
SRP54-201ENST00000216774 PNISRQ8TF01 805 aaKnown RBP18.03■□□□□ 0.48
SRP54-201ENST00000216774 RSPH4AQ5TD94 716 aa18.03■□□□□ 0.48
SRP54-201ENST00000216774 PREX2Q70Z35 1606 aa18.03■□□□□ 0.48
SRP54-201ENST00000216774 B4GALNT3Q6L9W6 998 aa18.02■□□□□ 0.48
SRP54-201ENST00000216774 FAM135AQ9P2D6 1515 aa18.02■□□□□ 0.47
SRP54-201ENST00000216774 SAMD9LQ8IVG5 1584 aa18.02■□□□□ 0.47
SRP54-201ENST00000216774 E9PCH4 1651 aa18.02■□□□□ 0.47
SRP54-201ENST00000216774 HNRNPMP52272 730 aaKnown RBP eCLIP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms