RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 RRBP1Q9P2E9 1410 aaKnown RBP15.14■□□□□ 0.01
RTCB-201ENST00000216038 ITGAEP38570 1179 aa15.14■□□□□ 0.01
RTCB-201ENST00000216038 PREX2Q70Z35 1606 aa15.14■□□□□ 0.01
RTCB-201ENST00000216038 MYT1Q01538 1121 aa15.14■□□□□ 0.01
RTCB-201ENST00000216038 ARHGAP5Q13017 1502 aa15.13■□□□□ 0.01
RTCB-201ENST00000216038 PTPN23Q9H3S7 1636 aa15.13■□□□□ 0.01
RTCB-201ENST00000216038 KIF13AQ9H1H9 1805 aa15.13■□□□□ 0.01
RTCB-201ENST00000216038 TSPOAP1O95153 1857 aa15.13■□□□□ 0.01
RTCB-201ENST00000216038 CD109Q6YHK3 1445 aa15.13■□□□□ 0.01
RTCB-201ENST00000216038 PLCH2O75038 1416 aa15.11■□□□□ 0.01
RTCB-201ENST00000216038 MIA2Q96PC5 1412 aa15.11■□□□□ 0.01
RTCB-201ENST00000216038 TRHP20396 242 aaPredicted RBP15.1■□□□□ 0.01
RTCB-201ENST00000216038 CAMSAP2Q08AD1 1489 aa15.09■□□□□ 0.01
RTCB-201ENST00000216038 MAP3K4Q9Y6R4 1608 aa15.09■□□□□ 0.01
RTCB-201ENST00000216038 GLI2P10070 1586 aa15.09■□□□□ 0.01
RTCB-201ENST00000216038 EFCAB2Q5VUJ9 269 aa15.08■□□□□ 0
RTCB-201ENST00000216038 SAMD9LQ8IVG5 1584 aa15.08■□□□□ 0
RTCB-201ENST00000216038 FANCAO15360 1455 aa15.08■□□□□ 0
RTCB-201ENST00000216038 HNRNPMP52272 730 aaKnown RBP eCLIP15.07■□□□□ 0
RTCB-201ENST00000216038 TCOF1Q13428 1488 aaKnown RBP15.06■□□□□ 0
RTCB-201ENST00000216038 ARAP3Q8WWN8 1544 aa15.03■□□□□ -0
RTCB-201ENST00000216038 SYCP2Q9BX26 1530 aa15.03■□□□□ -0
RTCB-201ENST00000216038 CHIC2Q9UKJ5 165 aa15.03■□□□□ -0
RTCB-201ENST00000216038 PPRC1Q5VV67 1664 aaKnown RBP15.03■□□□□ -0
RTCB-201ENST00000216038 ARHGEF12Q9NZN5 1544 aa15.02□□□□□ -0.01
RTCB-201ENST00000216038 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.02□□□□□ -0.01
RTCB-201ENST00000216038 PTPRKQ15262 1439 aa15.01□□□□□ -0.01
RTCB-201ENST00000216038 AKNAQ7Z591 1439 aa15.01□□□□□ -0.01
RTCB-201ENST00000216038 ADGRL1O94910 1474 aa15.01□□□□□ -0.01
RTCB-201ENST00000216038 ABCC1P33527 1531 aa15□□□□□ -0.01
RTCB-201ENST00000216038 MBD5Q9P267 1494 aa14.99□□□□□ -0.01
RTCB-201ENST00000216038 DNMT1P26358 1616 aaKnown RBP14.99□□□□□ -0.01
RTCB-201ENST00000216038 ABCC5O15440 1437 aa14.99□□□□□ -0.01
RTCB-201ENST00000216038 DAPK1P53355 1430 aa14.99□□□□□ -0.01
RTCB-201ENST00000216038 SCAPERQ9BY12 1400 aa14.99□□□□□ -0.01
RTCB-201ENST00000216038 AFAP1Q8N556 730 aa14.98□□□□□ -0.01
RTCB-201ENST00000216038 CFAP74Q9C0B2 1584 aa14.98□□□□□ -0.01
RTCB-201ENST00000216038 TRAPPC8Q9Y2L5 1435 aa14.97□□□□□ -0.01
RTCB-201ENST00000216038 PLEKHH2Q8IVE3 1493 aa14.97□□□□□ -0.01
RTCB-201ENST00000216038 KIAA1107Q9UPP5 1409 aa14.96□□□□□ -0.01
RTCB-201ENST00000216038 NEO1Q92859 1461 aa14.96□□□□□ -0.01
RTCB-201ENST00000216038 TEX14Q8IWB6 1497 aa14.96□□□□□ -0.02
RTCB-201ENST00000216038 RAPGEF3O95398 923 aa14.95□□□□□ -0.02
RTCB-201ENST00000216038 CROCC2H7BZ55 1655 aa14.95□□□□□ -0.02
RTCB-201ENST00000216038 CCDC141Q6ZP82 1450 aa14.95□□□□□ -0.02
RTCB-201ENST00000216038 RRP7BPQ9NSQ0 103 aa14.95□□□□□ -0.02
RTCB-201ENST00000216038 ARHGEF5Q12774 1597 aa14.94□□□□□ -0.02
RTCB-201ENST00000216038 TSPY4P0CV99 314 aa14.94□□□□□ -0.02
RTCB-201ENST00000216038 TSPY10P0CW01 314 aa14.94□□□□□ -0.02
RTCB-201ENST00000216038 C9orf84Q5VXU9 1444 aa14.92□□□□□ -0.02
RTCB-201ENST00000216038 MYT1LQ9UL68 1186 aa14.92□□□□□ -0.02
RTCB-201ENST00000216038 RSPH4AQ5TD94 716 aa14.91□□□□□ -0.02
RTCB-201ENST00000216038 DENND4BO75064 1496 aaPredicted RBP14.9□□□□□ -0.02
RTCB-201ENST00000216038 POGZQ7Z3K3 1410 aa14.9□□□□□ -0.02
RTCB-201ENST00000216038 SPAG9O60271 1321 aaKnown RBP14.9□□□□□ -0.02
RTCB-201ENST00000216038 ZNF518AQ6AHZ1 1483 aa14.89□□□□□ -0.03
RTCB-201ENST00000216038 COL17A1Q9UMD9 1497 aaPredicted RBP14.89□□□□□ -0.03
RTCB-201ENST00000216038 RICTORQ6R327 1708 aa14.88□□□□□ -0.03
RTCB-201ENST00000216038 ADGBQ8N7X0 1667 aa14.88□□□□□ -0.03
RTCB-201ENST00000216038 SHANK2Q9UPX8 1470 aa14.88□□□□□ -0.03
RTCB-201ENST00000216038 NCOA1Q15788 1441 aa14.87□□□□□ -0.03
RTCB-201ENST00000216038 ANKRD30AQ9BXX3 1397 aa14.86□□□□□ -0.03
RTCB-201ENST00000216038 FRMPD1Q5SYB0 1578 aa14.86□□□□□ -0.03
RTCB-201ENST00000216038 NAIPQ13075 1403 aa14.86□□□□□ -0.03
RTCB-201ENST00000216038 ZFYVE16Q7Z3T8 1539 aa14.85□□□□□ -0.03
RTCB-201ENST00000216038 HFM1A2PYH4 1435 aa14.85□□□□□ -0.03
RTCB-201ENST00000216038 KDM5CP41229 1560 aa14.85□□□□□ -0.03
RTCB-201ENST00000216038 ROCK1Q13464 1354 aa14.85□□□□□ -0.03
RTCB-201ENST00000216038 ATP7AQ04656 1500 aa14.84□□□□□ -0.03
RTCB-201ENST00000216038 MAST1Q9Y2H9 1570 aa14.84□□□□□ -0.03
RTCB-201ENST00000216038 ADGRL2O95490 1459 aa14.84□□□□□ -0.03
RTCB-201ENST00000216038 KIF15Q9NS87 1388 aa14.84□□□□□ -0.03
RTCB-201ENST00000216038 KIDINS220Q9ULH0 1771 aa14.84□□□□□ -0.03
RTCB-201ENST00000216038 SETD5Q9C0A6 1442 aa14.84□□□□□ -0.03
RTCB-201ENST00000216038 INO80Q9ULG1 1556 aaPredicted RBP14.84□□□□□ -0.03
RTCB-201ENST00000216038 KDM6BO15054 1643 aa14.84□□□□□ -0.03
RTCB-201ENST00000216038 RAB3GAP2Q9H2M9 1393 aa14.84□□□□□ -0.03
RTCB-201ENST00000216038 HECW2Q9P2P5 1572 aa14.82□□□□□ -0.04
RTCB-201ENST00000216038 GCC2Q8IWJ2 1684 aa14.82□□□□□ -0.04
RTCB-201ENST00000216038 PLXNC1O60486 1568 aa14.81□□□□□ -0.04
RTCB-201ENST00000216038 RTEL1-TNFRSF6BF6WH68 1400 aa14.8□□□□□ -0.04
RTCB-201ENST00000216038 YEATS2Q9ULM3 1422 aa14.8□□□□□ -0.04
RTCB-201ENST00000216038 MLH3Q9UHC1 1453 aa14.8□□□□□ -0.04
RTCB-201ENST00000216038 ABCA6Q8N139 1617 aa14.79□□□□□ -0.04
RTCB-201ENST00000216038 ANKRD50Q9ULJ7 1429 aa14.78□□□□□ -0.04
RTCB-201ENST00000216038 ZMYM4Q5VZL5 1548 aa14.77□□□□□ -0.04
RTCB-201ENST00000216038 DIP2CQ9Y2E4 1556 aa14.76□□□□□ -0.05
RTCB-201ENST00000216038 DUOX2Q9NRD8 1548 aa14.76□□□□□ -0.05
RTCB-201ENST00000216038 TRIM52Q96A61 297 aa14.75□□□□□ -0.05
RTCB-201ENST00000216038 A2MP01023 1474 aa14.73□□□□□ -0.05
RTCB-201ENST00000216038 DHX29Q7Z478 1369 aaKnown RBP14.73□□□□□ -0.05
RTCB-201ENST00000216038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.73□□□□□ -0.057e-9■□□□□ 8.1
RTCB-201ENST00000216038 MAGI2Q86UL8 1455 aa14.72□□□□□ -0.05
RTCB-201ENST00000216038 KIF3BO15066 747 aa14.72□□□□□ -0.05
RTCB-201ENST00000216038 ERBINQ96RT1 1412 aa14.71□□□□□ -0.05
RTCB-201ENST00000216038 ARHGEF40Q8TER5 1519 aa14.7□□□□□ -0.06
RTCB-201ENST00000216038 ATP10AO60312 1499 aa14.69□□□□□ -0.06
RTCB-201ENST00000216038 CCER1Q8TC90 406 aaPredicted RBP14.69□□□□□ -0.06
RTCB-201ENST00000216038 SIGLEC1Q9BZZ2 1709 aa14.69□□□□□ -0.06
RTCB-201ENST00000216038 NUP155O75694 1391 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms