RNA–Protein interactions for RNA: ENST00000188403.7

NR1H4-201, Transcript of nuclear receptor subfamily 1 group H member 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NR1H4, Length 1,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4-201ENST00000188403 CDC42BPAQ5VT25 1732 aa17.24■□□□□ 0.35
NR1H4-201ENST00000188403 SCAF1Q9H7N4 1312 aaKnown RBP17.23■□□□□ 0.35
NR1H4-201ENST00000188403 TCOF1Q13428 1488 aaKnown RBP17.23■□□□□ 0.35
NR1H4-201ENST00000188403 PREX2Q70Z35 1606 aa17.22■□□□□ 0.35
NR1H4-201ENST00000188403 PLCH2O75038 1416 aa17.21■□□□□ 0.35
NR1H4-201ENST00000188403 ITSN2Q9NZM3 1697 aa17.21■□□□□ 0.35
NR1H4-201ENST00000188403 PTPN23Q9H3S7 1636 aa17.21■□□□□ 0.35
NR1H4-201ENST00000188403 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.21■□□□□ 0.35
NR1H4-201ENST00000188403 DIP2BQ9P265 1576 aa17.21■□□□□ 0.35
NR1H4-201ENST00000188403 CFDP1Q9UEE9 299 aaPredicted RBP17.21■□□□□ 0.35
NR1H4-201ENST00000188403 ZNF644Q9H582 1327 aaPredicted RBP17.2■□□□□ 0.34
NR1H4-201ENST00000188403 PCGF6Q9BYE7 350 aa17.2■□□□□ 0.34
NR1H4-201ENST00000188403 CDC42BPBQ9Y5S2 1711 aa17.2■□□□□ 0.34
NR1H4-201ENST00000188403 GLI2P10070 1586 aa17.19■□□□□ 0.34
NR1H4-201ENST00000188403 MYO5CQ9NQX4 1742 aa17.18■□□□□ 0.34
NR1H4-201ENST00000188403 FAM50AQ14320 339 aaKnown RBP17.18■□□□□ 0.34
NR1H4-201ENST00000188403 ARAP3Q8WWN8 1544 aa17.17■□□□□ 0.34
NR1H4-201ENST00000188403 CAMSAP2Q08AD1 1489 aa17.17■□□□□ 0.34
NR1H4-201ENST00000188403 CD109Q6YHK3 1445 aa17.16■□□□□ 0.34
NR1H4-201ENST00000188403 ARHGAP5Q13017 1502 aa17.16■□□□□ 0.34
NR1H4-201ENST00000188403 FAM69CQ0P6D2 419 aa17.15■□□□□ 0.34
NR1H4-201ENST00000188403 SAMD9LQ8IVG5 1584 aa17.15■□□□□ 0.34
NR1H4-201ENST00000188403 MAPK8IP2Q13387 824 aaPredicted RBP17.14■□□□□ 0.33
NR1H4-201ENST00000188403 MAP3K4Q9Y6R4 1608 aa17.14■□□□□ 0.33
NR1H4-201ENST00000188403 ZNF777Q9ULD5 760 aaPredicted RBP17.14■□□□□ 0.33
NR1H4-201ENST00000188403 PTPRKQ15262 1439 aa17.12■□□□□ 0.33
NR1H4-201ENST00000188403 EFCAB2Q5VUJ9 269 aa17.11■□□□□ 0.33
NR1H4-201ENST00000188403 FANCAO15360 1455 aa17.11■□□□□ 0.33
NR1H4-201ENST00000188403 MBD5Q9P267 1494 aa17.1■□□□□ 0.33
NR1H4-201ENST00000188403 KIF13AQ9H1H9 1805 aa17.1■□□□□ 0.33
NR1H4-201ENST00000188403 DMRT2Q9Y5R5 561 aa17.1■□□□□ 0.33
NR1H4-201ENST00000188403 ARHGEF12Q9NZN5 1544 aa17.1■□□□□ 0.33
NR1H4-201ENST00000188403 ABCC5O15440 1437 aa17.09■□□□□ 0.33
NR1H4-201ENST00000188403 ABCC1P33527 1531 aa17.08■□□□□ 0.33
NR1H4-201ENST00000188403 ITGAEP38570 1179 aa17.08■□□□□ 0.32
NR1H4-201ENST00000188403 DAPK1P53355 1430 aa17.08■□□□□ 0.32
NR1H4-201ENST00000188403 KIAA1107Q9UPP5 1409 aa17.08■□□□□ 0.32
NR1H4-201ENST00000188403 SYCP2Q9BX26 1530 aa17.08■□□□□ 0.32
NR1H4-201ENST00000188403 DNMT1P26358 1616 aaKnown RBP17.07■□□□□ 0.32
NR1H4-201ENST00000188403 HNRNPMP52272 730 aaKnown RBP eCLIP17.07■□□□□ 0.32
NR1H4-201ENST00000188403 AKNAQ7Z591 1439 aa17.06■□□□□ 0.32
NR1H4-201ENST00000188403 PLEKHH2Q8IVE3 1493 aa17.06■□□□□ 0.32
NR1H4-201ENST00000188403 PPRC1Q5VV67 1664 aaKnown RBP17.06■□□□□ 0.32
NR1H4-201ENST00000188403 ARHGEF5Q12774 1597 aa17.05■□□□□ 0.32
NR1H4-201ENST00000188403 NEO1Q92859 1461 aa17.04■□□□□ 0.32
NR1H4-201ENST00000188403 ADGRL1O94910 1474 aa17.03■□□□□ 0.32
NR1H4-201ENST00000188403 TRAPPC8Q9Y2L5 1435 aa17.02■□□□□ 0.32
NR1H4-201ENST00000188403 CCDC141Q6ZP82 1450 aa17.02■□□□□ 0.32
NR1H4-201ENST00000188403 SCAPERQ9BY12 1400 aa17.02■□□□□ 0.31
NR1H4-201ENST00000188403 CFAP74Q9C0B2 1584 aa17.02■□□□□ 0.31
NR1H4-201ENST00000188403 CROCC2H7BZ55 1655 aa17■□□□□ 0.31
NR1H4-201ENST00000188403 SHANK2Q9UPX8 1470 aa17■□□□□ 0.31
NR1H4-201ENST00000188403 RSPH4AQ5TD94 716 aa16.99■□□□□ 0.31
NR1H4-201ENST00000188403 CHIC2Q9UKJ5 165 aa16.99■□□□□ 0.31
NR1H4-201ENST00000188403 TEX14Q8IWB6 1497 aa16.98■□□□□ 0.31
NR1H4-201ENST00000188403 TSPOAP1O95153 1857 aa16.98■□□□□ 0.31
NR1H4-201ENST00000188403 C9orf84Q5VXU9 1444 aa16.97■□□□□ 0.31
NR1H4-201ENST00000188403 ADGRL2O95490 1459 aa16.97■□□□□ 0.31
NR1H4-201ENST00000188403 AFAP1Q8N556 730 aa16.96■□□□□ 0.31
NR1H4-201ENST00000188403 POGZQ7Z3K3 1410 aa16.96■□□□□ 0.31
NR1H4-201ENST00000188403 ROCK1Q13464 1354 aa16.96■□□□□ 0.31
NR1H4-201ENST00000188403 TRHP20396 242 aaPredicted RBP16.96■□□□□ 0.3
NR1H4-201ENST00000188403 HFM1A2PYH4 1435 aa16.95■□□□□ 0.3
NR1H4-201ENST00000188403 MAST1Q9Y2H9 1570 aa16.95■□□□□ 0.3
NR1H4-201ENST00000188403 NCOA1Q15788 1441 aa16.95■□□□□ 0.3
NR1H4-201ENST00000188403 TSPY4P0CV99 314 aa16.94■□□□□ 0.3
NR1H4-201ENST00000188403 TSPY10P0CW01 314 aa16.94■□□□□ 0.3
NR1H4-201ENST00000188403 NAIPQ13075 1403 aa16.94■□□□□ 0.3
NR1H4-201ENST00000188403 DENND4BO75064 1496 aaPredicted RBP16.94■□□□□ 0.3
NR1H4-201ENST00000188403 KCNA4P22459 653 aa16.93■□□□□ 0.3
NR1H4-201ENST00000188403 ZNF518AQ6AHZ1 1483 aa16.93■□□□□ 0.3
NR1H4-201ENST00000188403 RRP7BPQ9NSQ0 103 aa16.92■□□□□ 0.3
NR1H4-201ENST00000188403 COL17A1Q9UMD9 1497 aaPredicted RBP16.92■□□□□ 0.3
NR1H4-201ENST00000188403 KDM5CP41229 1560 aa16.92■□□□□ 0.3
NR1H4-201ENST00000188403 ZFYVE16Q7Z3T8 1539 aa16.91■□□□□ 0.3
NR1H4-201ENST00000188403 RAPGEF3O95398 923 aa16.91■□□□□ 0.3
NR1H4-201ENST00000188403 FRMPD1Q5SYB0 1578 aa16.91■□□□□ 0.3
NR1H4-201ENST00000188403 SETD5Q9C0A6 1442 aa16.9■□□□□ 0.3
NR1H4-201ENST00000188403 ADGBQ8N7X0 1667 aa16.9■□□□□ 0.3
NR1H4-201ENST00000188403 ANKRD30AQ9BXX3 1397 aa16.9■□□□□ 0.3
NR1H4-201ENST00000188403 RTEL1-TNFRSF6BF6WH68 1400 aa16.9■□□□□ 0.3
NR1H4-201ENST00000188403 INO80Q9ULG1 1556 aaPredicted RBP16.9■□□□□ 0.3
NR1H4-201ENST00000188403 RAB3GAP2Q9H2M9 1393 aa16.89■□□□□ 0.29
NR1H4-201ENST00000188403 SPAG9O60271 1321 aaKnown RBP16.89■□□□□ 0.29
NR1H4-201ENST00000188403 RICTORQ6R327 1708 aa16.89■□□□□ 0.29
NR1H4-201ENST00000188403 NCBP3Q53F19 620 aaKnown RBP16.88■□□□□ 0.29
NR1H4-201ENST00000188403 CNKSR2Q8WXI2 1034 aa16.88■□□□□ 0.29
NR1H4-201ENST00000188403 GCC2Q8IWJ2 1684 aa16.87■□□□□ 0.29
NR1H4-201ENST00000188403 ATP7AQ04656 1500 aa16.87■□□□□ 0.29
NR1H4-201ENST00000188403 PLXNC1O60486 1568 aa16.87■□□□□ 0.29
NR1H4-201ENST00000188403 KDM6BO15054 1643 aa16.87■□□□□ 0.29
NR1H4-201ENST00000188403 MLH3Q9UHC1 1453 aa16.87■□□□□ 0.29
NR1H4-201ENST00000188403 KIF15Q9NS87 1388 aa16.86■□□□□ 0.29
NR1H4-201ENST00000188403 KIDINS220Q9ULH0 1771 aa16.85■□□□□ 0.29
NR1H4-201ENST00000188403 ZMYM4Q5VZL5 1548 aa16.84■□□□□ 0.29
NR1H4-201ENST00000188403 HECW2Q9P2P5 1572 aa16.84■□□□□ 0.29
NR1H4-201ENST00000188403 HRCP23327 699 aa16.82■□□□□ 0.28
NR1H4-201ENST00000188403 ANKRD50Q9ULJ7 1429 aa16.82■□□□□ 0.28
NR1H4-201ENST00000188403 YEATS2Q9ULM3 1422 aa16.81■□□□□ 0.28
NR1H4-201ENST00000188403 DUOX2Q9NRD8 1548 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms