RNA–Protein interactions for RNA: ENST00000172229.7

NGFR-201, Transcript of nerve growth factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NGFR, Length 3,417 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGFR-201ENST00000172229 TSPY10P0CW01 314 aa22.82■■□□□ 1.24
NGFR-201ENST00000172229 PTPN23Q9H3S7 1636 aa22.81■■□□□ 1.24
NGFR-201ENST00000172229 THOC2Q8NI27 1593 aaKnown RBP22.79■■□□□ 1.24
NGFR-201ENST00000172229 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.77■■□□□ 1.23
NGFR-201ENST00000172229 EHBP1L1Q8N3D4 1523 aa22.76■■□□□ 1.23
NGFR-201ENST00000172229 SUPT6HQ7KZ85 1726 aaKnown RBP22.76■■□□□ 1.23
NGFR-201ENST00000172229 MRC2Q9UBG0 1479 aa22.75■■□□□ 1.23
NGFR-201ENST00000172229 IQGAP2Q13576 1575 aa22.75■■□□□ 1.23
NGFR-201ENST00000172229 DCAF11Q8TEB1 546 aa22.75■■□□□ 1.23
NGFR-201ENST00000172229 PLB1Q6P1J6 1458 aa22.74■■□□□ 1.23
NGFR-201ENST00000172229 ABCA5Q8WWZ7 1642 aa22.73■■□□□ 1.23
NGFR-201ENST00000172229 CARD11Q9BXL7 1154 aa22.72■■□□□ 1.23
NGFR-201ENST00000172229 B4GALNT3Q6L9W6 998 aa22.71■■□□□ 1.23
NGFR-201ENST00000172229 NUP155O75694 1391 aa22.71■■□□□ 1.23
NGFR-201ENST00000172229 KDM6BO15054 1643 aa22.7■■□□□ 1.22
NGFR-201ENST00000172229 PRKRIP1Q9H875 184 aaPredicted RBP22.69■■□□□ 1.22
NGFR-201ENST00000172229 UGGT2Q9NYU1 1516 aa22.68■■□□□ 1.22
NGFR-201ENST00000172229 KIF7Q2M1P5 1343 aa22.68■■□□□ 1.22
NGFR-201ENST00000172229 SENP3Q9H4L4 574 aaPredicted RBP22.67■■□□□ 1.22
NGFR-201ENST00000172229 ABCC5O15440 1437 aa22.66■■□□□ 1.22
NGFR-201ENST00000172229 DAPK1P53355 1430 aa22.66■■□□□ 1.22
NGFR-201ENST00000172229 SAMD9Q5K651 1589 aa22.65■■□□□ 1.22
NGFR-201ENST00000172229 TMC1Q8TDI8 760 aa22.64■■□□□ 1.21
NGFR-201ENST00000172229 HECW1Q76N89 1606 aa22.63■■□□□ 1.21
NGFR-201ENST00000172229 RBM19Q9Y4C8 960 aaKnown RBP22.63■■□□□ 1.21
NGFR-201ENST00000172229 LRRIQ1Q96JM4 1722 aa22.63■■□□□ 1.21
NGFR-201ENST00000172229 CCDC7Q96M83 1385 aa22.62■■□□□ 1.21
NGFR-201ENST00000172229 TARBP1Q13395 1621 aaKnown RBP22.62■■□□□ 1.21
NGFR-201ENST00000172229 ERICH6Q7L0X2 663 aa22.6■■□□□ 1.21
NGFR-201ENST00000172229 ST20-MTHFSA0A0A6YYL1 179 aa22.59■■□□□ 1.21
NGFR-201ENST00000172229 NUP153P49790 1475 aaKnown RBP22.58■■□□□ 1.21
NGFR-201ENST00000172229 IFT140Q96RY7 1462 aa22.58■■□□□ 1.2
NGFR-201ENST00000172229 ANKRD30BQ9BXX2 1392 aa22.58■■□□□ 1.2
NGFR-201ENST00000172229 KIAA0586Q9BVV6 1533 aa22.57■■□□□ 1.2
NGFR-201ENST00000172229 CARMIL2Q6F5E8 1435 aa22.56■■□□□ 1.2
NGFR-201ENST00000172229 GRIN2AQ12879 1464 aa22.56■■□□□ 1.2
NGFR-201ENST00000172229 MIA2Q96PC5 1412 aa22.55■■□□□ 1.2
NGFR-201ENST00000172229 BCL11AQ9H165 835 aa22.55■■□□□ 1.2
NGFR-201ENST00000172229 ANKRD30AQ9BXX3 1397 aa22.55■■□□□ 1.2
NGFR-201ENST00000172229 ADAMTS12P58397 1594 aa22.54■■□□□ 1.2
NGFR-201ENST00000172229 DENND4BO75064 1496 aaPredicted RBP22.53■■□□□ 1.2
NGFR-201ENST00000172229 USP47Q96K76 1375 aa22.52■■□□□ 1.2
NGFR-201ENST00000172229 DISP1Q96F81 1524 aa22.52■■□□□ 1.2
NGFR-201ENST00000172229 CC2D1BQ5T0F9 858 aaKnown RBP22.52■■□□□ 1.2
NGFR-201ENST00000172229 WDR62O43379 1518 aa22.51■■□□□ 1.19
NGFR-201ENST00000172229 TROQ12816 1431 aaPredicted RBP22.5■■□□□ 1.19
NGFR-201ENST00000172229 CNTLNQ9NXG0 1405 aa22.5■■□□□ 1.19
NGFR-201ENST00000172229 PBRM1Q86U86 1689 aa22.49■■□□□ 1.19
NGFR-201ENST00000172229 ANKRD50Q9ULJ7 1429 aa22.49■■□□□ 1.19
NGFR-201ENST00000172229 ARHGEF11O15085 1522 aa22.47■■□□□ 1.19
NGFR-201ENST00000172229 NBPF1Q3BBV0 1214 aa22.46■■□□□ 1.19
NGFR-201ENST00000172229 CAMSAP2Q08AD1 1489 aa22.46■■□□□ 1.19
NGFR-201ENST00000172229 PTPRGP23470 1445 aa22.46■■□□□ 1.19
NGFR-201ENST00000172229 NCOA1Q15788 1441 aa22.44■■□□□ 1.18
NGFR-201ENST00000172229 TCOF1Q13428 1488 aaKnown RBP22.44■■□□□ 1.18
NGFR-201ENST00000172229 KIF15Q9NS87 1388 aa22.42■■□□□ 1.18
NGFR-201ENST00000172229 GPATCH8Q9UKJ3 1502 aaKnown RBP22.42■■□□□ 1.18
NGFR-201ENST00000172229 AKNAQ7Z591 1439 aa22.4■■□□□ 1.18
NGFR-201ENST00000172229 KIAA0556O60303 1618 aa22.4■■□□□ 1.18
NGFR-201ENST00000172229 ROCK2O75116 1388 aaKnown RBP22.4■■□□□ 1.18
NGFR-201ENST00000172229 CHGAP10645 457 aaKnown RBP22.4■■□□□ 1.18
NGFR-201ENST00000172229 RPRD2Q5VT52 1461 aaKnown RBP22.39■■□□□ 1.17
NGFR-201ENST00000172229 CCDC136Q96JN2 1154 aa22.39■■□□□ 1.17
NGFR-201ENST00000172229 ANP32EQ9BTT0 268 aa22.38■■□□□ 1.17
NGFR-201ENST00000172229 EIF4G3O43432 1585 aaKnown RBP22.37■■□□□ 1.17
NGFR-201ENST00000172229 PPP4R2Q9NY27 417 aa22.37■■□□□ 1.17
NGFR-201ENST00000172229 KDM5BQ9UGL1 1544 aa22.36■■□□□ 1.17
NGFR-201ENST00000172229 ROCK1Q13464 1354 aa22.36■■□□□ 1.17
NGFR-201ENST00000172229 RAPGEF6Q8TEU7 1601 aa22.35■■□□□ 1.17
NGFR-201ENST00000172229 C9orf84Q5VXU9 1444 aa22.35■■□□□ 1.17
NGFR-201ENST00000172229 KIAA1107Q9UPP5 1409 aa22.35■■□□□ 1.17
NGFR-201ENST00000172229 KIF14Q15058 1648 aa22.34■■□□□ 1.17
NGFR-201ENST00000172229 NPM2Q86SE8 214 aaKnown RBP22.33■■□□□ 1.17
NGFR-201ENST00000172229 SYNJ2O15056 1496 aa22.33■■□□□ 1.17
NGFR-201ENST00000172229 PZPP20742 1482 aa22.3■■□□□ 1.16
NGFR-201ENST00000172229 ATP10BO94823 1461 aa22.3■■□□□ 1.16
NGFR-201ENST00000172229 AFAP1Q8N556 730 aa22.29■■□□□ 1.16
NGFR-201ENST00000172229 ZBED9Q6R2W3 1325 aa22.29■■□□□ 1.16
NGFR-201ENST00000172229 CEP170Q5SW79 1584 aa22.28■■□□□ 1.16
NGFR-201ENST00000172229 MAGI1Q96QZ7 1491 aaPredicted RBP22.26■■□□□ 1.15
NGFR-201ENST00000172229 TEX14Q8IWB6 1497 aa22.25■■□□□ 1.15
NGFR-201ENST00000172229 PLIN1O60240 522 aa22.23■■□□□ 1.15
NGFR-201ENST00000172229 PANK3Q9H999 370 aa22.22■■□□□ 1.15
NGFR-201ENST00000172229 CCDC144AA2RUR9 1427 aa22.22■■□□□ 1.15
NGFR-201ENST00000172229 NBR1Q14596 966 aa22.22■■□□□ 1.15
NGFR-201ENST00000172229 NUDCQ9Y266 331 aa22.21■■□□□ 1.15
NGFR-201ENST00000172229 CDCA7LQ96GN5 454 aa22.21■■□□□ 1.15
NGFR-201ENST00000172229 DNMT1P26358 1616 aaKnown RBP22.2■■□□□ 1.15
NGFR-201ENST00000172229 GCC2Q8IWJ2 1684 aa22.2■■□□□ 1.14
NGFR-201ENST00000172229 MSH5O43196 834 aa22.2■■□□□ 1.14
NGFR-201ENST00000172229 PNISRQ8TF01 805 aaKnown RBP22.19■■□□□ 1.14
NGFR-201ENST00000172229 TNNT2P45379 298 aaPredicted RBP22.19■■□□□ 1.14
NGFR-201ENST00000172229 NUTM2DQ5VT03 806 aaPredicted RBP22.17■■□□□ 1.14
NGFR-201ENST00000172229 KIF3BO15066 747 aa22.16■■□□□ 1.14
NGFR-201ENST00000172229 EFCAB2Q5VUJ9 269 aa22.15■■□□□ 1.14
NGFR-201ENST00000172229 ARHGAP5Q13017 1502 aa22.14■■□□□ 1.14
NGFR-201ENST00000172229 SKAP1Q86WV1 359 aa22.14■■□□□ 1.14
NGFR-201ENST00000172229 SPATA31E1Q6ZUB1 1445 aa22.13■■□□□ 1.13
NGFR-201ENST00000172229 EXOC6Q8TAG9 804 aa22.13■■□□□ 1.13
NGFR-201ENST00000172229 DHX29Q7Z478 1369 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms