RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 MROH2BQ7Z745 1585 aa15.97■□□□□ 0.15
LMCD1-201ENST00000157600 GOLGA6L4A6NEF3 574 aa15.97■□□□□ 0.15
LMCD1-201ENST00000157600 CECR2Q9BXF3 1484 aa15.96■□□□□ 0.15
LMCD1-201ENST00000157600 FRAT1Q92837 279 aaPredicted RBP15.95■□□□□ 0.14
LMCD1-201ENST00000157600 A0A0G2JS52 829 aa15.93■□□□□ 0.14
LMCD1-201ENST00000157600 RGS3P49796 1198 aa15.93■□□□□ 0.14
LMCD1-201ENST00000157600 SOGA1O94964 1423 aa15.93■□□□□ 0.14
LMCD1-201ENST00000157600 MSNP26038 577 aaKnown RBP15.93■□□□□ 0.14
LMCD1-201ENST00000157600 GBP4Q96PP9 640 aa15.93■□□□□ 0.14
LMCD1-201ENST00000157600 LAS1LQ9Y4W2 734 aaKnown RBP15.93■□□□□ 0.14
LMCD1-201ENST00000157600 ZBTB7CA1YPR0 619 aa15.92■□□□□ 0.14
LMCD1-201ENST00000157600 GOLGA2Q08379 1002 aa15.92■□□□□ 0.14
LMCD1-201ENST00000157600 HTATSF1O43719 755 aaKnown RBP15.92■□□□□ 0.14
LMCD1-201ENST00000157600 MORC1Q86VD1 984 aa15.92■□□□□ 0.14
LMCD1-201ENST00000157600 SYAP1Q96A49 352 aaPredicted RBP15.92■□□□□ 0.14
LMCD1-201ENST00000157600 TCERG1O14776 1098 aaKnown RBP15.91■□□□□ 0.14
LMCD1-201ENST00000157600 U2SURPO15042 1029 aaKnown RBP15.91■□□□□ 0.14
LMCD1-201ENST00000157600 HDGFL2Q7Z4V5 671 aaPredicted RBP15.91■□□□□ 0.14
LMCD1-201ENST00000157600 CC2D1BQ5T0F9 858 aaKnown RBP15.9■□□□□ 0.14
LMCD1-201ENST00000157600 UACAQ9BZF9 1416 aa15.9■□□□□ 0.14
LMCD1-201ENST00000157600 RAPGEF2Q9Y4G8 1499 aa15.9■□□□□ 0.14
LMCD1-201ENST00000157600 PDE3BQ13370 1112 aa15.9■□□□□ 0.14
LMCD1-201ENST00000157600 NEUROD2Q15784 382 aa15.89■□□□□ 0.13
LMCD1-201ENST00000157600 RTF1Q92541 710 aaKnown RBP15.89■□□□□ 0.13
LMCD1-201ENST00000157600 NAP1L5Q96NT1 182 aaPredicted RBP15.89■□□□□ 0.13
LMCD1-201ENST00000157600 SIN3AQ96ST3 1273 aa15.89■□□□□ 0.13
LMCD1-201ENST00000157600 RWDD1Q9H446 243 aaPredicted RBP15.88■□□□□ 0.13
LMCD1-201ENST00000157600 KIAA1211Q6ZU35 1233 aa15.88■□□□□ 0.13
LMCD1-201ENST00000157600 RAB3GAP2Q9H2M9 1393 aa15.88■□□□□ 0.13
LMCD1-201ENST00000157600 CCDC34Q96HJ3 373 aa15.88■□□□□ 0.13
LMCD1-201ENST00000157600 PMFBP1Q8TBY8 1022 aa15.87■□□□□ 0.13
LMCD1-201ENST00000157600 SRPK2P78362 688 aaKnown RBP15.87■□□□□ 0.13
LMCD1-201ENST00000157600 CUX1P39880 1505 aa15.86■□□□□ 0.13
LMCD1-201ENST00000157600 GPATCH3Q96I76 525 aa15.84■□□□□ 0.13
LMCD1-201ENST00000157600 NPHP1O15259 732 aa15.84■□□□□ 0.13
LMCD1-201ENST00000157600 RCAN3Q9UKA8 241 aa15.84■□□□□ 0.13
LMCD1-201ENST00000157600 SPAG9O60271 1321 aaKnown RBP15.84■□□□□ 0.13
LMCD1-201ENST00000157600 CSPP1Q1MSJ5 1256 aa15.84■□□□□ 0.13
LMCD1-201ENST00000157600 LMOD3Q0VAK6 560 aa15.83■□□□□ 0.12
LMCD1-201ENST00000157600 NUP155O75694 1391 aa15.83■□□□□ 0.12
LMCD1-201ENST00000157600 EFCAB2Q5VUJ9 269 aa15.82■□□□□ 0.12
LMCD1-201ENST00000157600 B4GALNT3Q6L9W6 998 aa15.82■□□□□ 0.12
LMCD1-201ENST00000157600 PKD2Q13563 968 aa15.81■□□□□ 0.12
LMCD1-201ENST00000157600 TERF2IPQ9NYB0 399 aa15.81■□□□□ 0.12
LMCD1-201ENST00000157600 USP35Q9P2H5 1018 aa15.81■□□□□ 0.12
LMCD1-201ENST00000157600 HMMRO75330 724 aa15.81■□□□□ 0.12
LMCD1-201ENST00000157600 KIAA2012Q0VF49 1180 aa15.8■□□□□ 0.12
LMCD1-201ENST00000157600 KIF15Q9NS87 1388 aa15.8■□□□□ 0.12
LMCD1-201ENST00000157600 HSPA5P11021 654 aaKnown RBP15.8■□□□□ 0.12
LMCD1-201ENST00000157600 NGEFQ8N5V2 710 aa15.8■□□□□ 0.12
LMCD1-201ENST00000157600 CHMP4CQ96CF2 233 aa15.8■□□□□ 0.12
LMCD1-201ENST00000157600 NLRP13Q86W25 1043 aa15.8■□□□□ 0.12
LMCD1-201ENST00000157600 PHF14O94880 888 aa15.8■□□□□ 0.12
LMCD1-201ENST00000157600 MPHOSPH9Q99550 1183 aa15.8■□□□□ 0.12
LMCD1-201ENST00000157600 PLCB2Q00722 1185 aa15.77■□□□□ 0.12
LMCD1-201ENST00000157600 GNL2Q13823 731 aaKnown RBP15.77■□□□□ 0.12
LMCD1-201ENST00000157600 TPM4P67936 248 aa15.76■□□□□ 0.11
LMCD1-201ENST00000157600 PRDM2Q13029 1718 aa15.76■□□□□ 0.11
LMCD1-201ENST00000157600 KIF3AQ9Y496 699 aa15.75■□□□□ 0.11
LMCD1-201ENST00000157600 DRC7Q8IY82 874 aa15.75■□□□□ 0.11
LMCD1-201ENST00000157600 LMOD2Q6P5Q4 547 aa15.74■□□□□ 0.11
LMCD1-201ENST00000157600 RBM19Q9Y4C8 960 aaKnown RBP15.74■□□□□ 0.11
LMCD1-201ENST00000157600 CCDC144AA2RUR9 1427 aa15.73■□□□□ 0.11
LMCD1-201ENST00000157600 STK31Q9BXU1 1019 aa15.73■□□□□ 0.11
LMCD1-201ENST00000157600 NAP1L2Q9ULW6 460 aaPredicted RBP15.73■□□□□ 0.11
LMCD1-201ENST00000157600 CADPSQ9ULU8 1353 aa15.71■□□□□ 0.11
LMCD1-201ENST00000157600 U2AF1L5P0DN76 240 aaPredicted RBP15.7■□□□□ 0.1
LMCD1-201ENST00000157600 U2AF1Q01081 240 aaKnown RBP eCLIP15.7■□□□□ 0.1
LMCD1-201ENST00000157600 ITPRIPQ8IWB1 547 aa15.69■□□□□ 0.1
LMCD1-201ENST00000157600 STAC3Q96MF2 364 aa15.69■□□□□ 0.1
LMCD1-201ENST00000157600 KIF21BO75037 1637 aa15.68■□□□□ 0.1
LMCD1-201ENST00000157600 MYBBP1AQ9BQG0 1328 aaKnown RBP15.68■□□□□ 0.1
LMCD1-201ENST00000157600 ST18O60284 1047 aa15.68■□□□□ 0.1
LMCD1-201ENST00000157600 IPO9Q96P70 1041 aaKnown RBP15.67■□□□□ 0.1
LMCD1-201ENST00000157600 CENPJQ9HC77 1338 aaPredicted RBP15.67■□□□□ 0.1
LMCD1-201ENST00000157600 DDX11L8A8MPP1 907 aa15.67■□□□□ 0.1
LMCD1-201ENST00000157600 DEKP35659 375 aaKnown RBP15.66■□□□□ 0.1
LMCD1-201ENST00000157600 AAMPQ13685 434 aa15.66■□□□□ 0.1
LMCD1-201ENST00000157600 ATP6V1DQ9Y5K8 247 aa15.66■□□□□ 0.1
LMCD1-201ENST00000157600 ZBED9Q6R2W3 1325 aa15.65■□□□□ 0.1
LMCD1-201ENST00000157600 SMC4Q9NTJ3 1288 aa15.64■□□□□ 0.09
LMCD1-201ENST00000157600 PLEKHG5O94827 1062 aa15.64■□□□□ 0.09
LMCD1-201ENST00000157600 CENPQQ7L2Z9 268 aaPredicted RBP15.64■□□□□ 0.09
LMCD1-201ENST00000157600 EID1Q9Y6B2 187 aa15.63■□□□□ 0.09
LMCD1-201ENST00000157600 LRRFIP1Q32MZ4 808 aaKnown RBP15.63■□□□□ 0.09
LMCD1-201ENST00000157600 GOLGA6L3A6NEY3 463 aa15.63■□□□□ 0.09
LMCD1-201ENST00000157600 KANK4Q5T7N3 995 aaPredicted RBP15.63■□□□□ 0.09
LMCD1-201ENST00000157600 TMX4Q9H1E5 349 aaPredicted RBP15.63■□□□□ 0.09
LMCD1-201ENST00000157600 ROCK1Q13464 1354 aa15.62■□□□□ 0.09
LMCD1-201ENST00000157600 CGNL1Q0VF96 1302 aa15.62■□□□□ 0.09
LMCD1-201ENST00000157600 ERICH3Q5RHP9 1530 aa15.62■□□□□ 0.09
LMCD1-201ENST00000157600 ATAD2BQ9ULI0 1458 aa15.62■□□□□ 0.09
LMCD1-201ENST00000157600 SKOR2Q2VWA4 1001 aaPredicted RBP15.62■□□□□ 0.09
LMCD1-201ENST00000157600 FHOD3Q2V2M9 1422 aa15.61■□□□□ 0.09
LMCD1-201ENST00000157600 GGT6Q6P531 493 aa15.61■□□□□ 0.09
LMCD1-201ENST00000157600 SENP3Q9H4L4 574 aaPredicted RBP15.6■□□□□ 0.09
LMCD1-201ENST00000157600 TPRNQ4KMQ1 711 aa15.6■□□□□ 0.09
LMCD1-201ENST00000157600 MYOM3Q5VTT5 1437 aa15.6■□□□□ 0.09
LMCD1-201ENST00000157600 E9PSI1 815 aa15.59■□□□□ 0.09
LMCD1-201ENST00000157600 KIF16BQ96L93 1317 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms