RNA–Protein interactions for RNA: ENST00000027335.7

CDH17-201, Transcript of cadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH17, Length 3,693 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-201ENST00000027335 UBE2Q2Q8WVN8 375 aa7.01□□□□□ -1.29
CDH17-201ENST00000027335 ZNF777Q9ULD5 760 aaPredicted RBP7.01□□□□□ -1.29
CDH17-201ENST00000027335 ABCC2Q92887 1545 aa7.01□□□□□ -1.29
CDH17-201ENST00000027335 CUL7Q14999 1698 aa7.01□□□□□ -1.29
CDH17-201ENST00000027335 LMTK3Q96Q04 1460 aa7□□□□□ -1.29
CDH17-201ENST00000027335 PHLDB1Q86UU1 1377 aa7□□□□□ -1.29
CDH17-201ENST00000027335 MYT1LQ9UL68 1186 aa7□□□□□ -1.29
CDH17-201ENST00000027335 CHIC2Q9UKJ5 165 aa6.99□□□□□ -1.29
CDH17-201ENST00000027335 PRG4Q92954 1404 aaPredicted RBP6.98□□□□□ -1.29
CDH17-201ENST00000027335 PCF11O94913 1555 aaKnown RBP6.98□□□□□ -1.29
CDH17-201ENST00000027335 ARAP3Q8WWN8 1544 aa6.98□□□□□ -1.29
CDH17-201ENST00000027335 NEFLP07196 543 aa6.98□□□□□ -1.29
CDH17-201ENST00000027335 FBXO3Q9UK99 471 aa6.98□□□□□ -1.29
CDH17-201ENST00000027335 SPATA31D1Q6ZQQ2 1576 aa6.98□□□□□ -1.29
CDH17-201ENST00000027335 KDM5BQ9UGL1 1544 aa6.98□□□□□ -1.29
CDH17-201ENST00000027335 FHOD3Q2V2M9 1422 aa6.97□□□□□ -1.29
CDH17-201ENST00000027335 VPS8Q8N3P4 1428 aa6.96□□□□□ -1.29
CDH17-201ENST00000027335 MTUS2Q5JR59 1369 aa6.96□□□□□ -1.29
CDH17-201ENST00000027335 BCORL1Q5H9F3 1711 aa6.96□□□□□ -1.3
CDH17-201ENST00000027335 ZNF326Q5BKZ1 582 aaKnown RBP6.96□□□□□ -1.3
CDH17-201ENST00000027335 EPRSP07814 1512 aaKnown RBP6.96□□□□□ -1.3
CDH17-201ENST00000027335 TSPOAP1O95153 1857 aa6.95□□□□□ -1.3
CDH17-201ENST00000027335 ACIN1Q9UKV3 1341 aaKnown RBP6.95□□□□□ -1.3
CDH17-201ENST00000027335 PDE4CQ08493 712 aa6.94□□□□□ -1.3
CDH17-201ENST00000027335 KCNH8Q96L42 1107 aa6.94□□□□□ -1.3
CDH17-201ENST00000027335 FAM69CQ0P6D2 419 aa6.94□□□□□ -1.3
CDH17-201ENST00000027335 HIRIP3Q9BW71 556 aaPredicted RBP6.94□□□□□ -1.3
CDH17-201ENST00000027335 HAP1P54257 671 aaPredicted RBP6.92□□□□□ -1.3
CDH17-201ENST00000027335 PRXQ9BXM0 1461 aa6.92□□□□□ -1.3
CDH17-201ENST00000027335 MIER1Q8N108 512 aa6.92□□□□□ -1.3
CDH17-201ENST00000027335 NPM1P06748 294 aaKnown RBP eCLIP6.92□□□□□ -1.3
CDH17-201ENST00000027335 PKNOX2Q96KN3 472 aa6.92□□□□□ -1.3
CDH17-201ENST00000027335 RRP7BPQ9NSQ0 103 aa6.91□□□□□ -1.3
CDH17-201ENST00000027335 CDK11AQ9UQ88 783 aaPredicted RBP6.91□□□□□ -1.3
CDH17-201ENST00000027335 JPH4Q96JJ6 628 aa6.91□□□□□ -1.3
CDH17-201ENST00000027335 ZCCHC11Q5TAX3 1644 aaKnown RBP6.9□□□□□ -1.3
CDH17-201ENST00000027335 DDX10Q13206 875 aaKnown RBP6.9□□□□□ -1.3
CDH17-201ENST00000027335 ASXL2Q76L83 1435 aa6.9□□□□□ -1.3
CDH17-201ENST00000027335 PLCB2Q00722 1185 aa6.9□□□□□ -1.31
CDH17-201ENST00000027335 PTPRMP28827 1452 aa6.89□□□□□ -1.31
CDH17-201ENST00000027335 KIF21BO75037 1637 aa6.89□□□□□ -1.31
CDH17-201ENST00000027335 COL17A1Q9UMD9 1497 aaPredicted RBP6.89□□□□□ -1.31
CDH17-201ENST00000027335 TTC37Q6PGP7 1564 aa6.88□□□□□ -1.31
CDH17-201ENST00000027335 UGGT2Q9NYU1 1516 aa6.88□□□□□ -1.31
CDH17-201ENST00000027335 PREX1Q8TCU6 1659 aa6.88□□□□□ -1.31
CDH17-201ENST00000027335 ARHGAP35Q9NRY4 1499 aa6.87□□□□□ -1.31
CDH17-201ENST00000027335 PLEKHD1A6NEE1 506 aa6.87□□□□□ -1.31
CDH17-201ENST00000027335 ANP32CO43423 234 aa6.87□□□□□ -1.31
CDH17-201ENST00000027335 ZMYM4Q5VZL5 1548 aa6.87□□□□□ -1.31
CDH17-201ENST00000027335 CFAP74Q9C0B2 1584 aa6.87□□□□□ -1.31
CDH17-201ENST00000027335 TMEM132AQ24JP5 1023 aa6.87□□□□□ -1.31
CDH17-201ENST00000027335 ARHGEF40Q8TER5 1519 aa6.86□□□□□ -1.31
CDH17-201ENST00000027335 DMRT2Q9Y5R5 561 aa6.86□□□□□ -1.31
CDH17-201ENST00000027335 ABCA9Q8IUA7 1624 aa6.86□□□□□ -1.31
CDH17-201ENST00000027335 WDR7Q9Y4E6 1490 aa6.86□□□□□ -1.31
CDH17-201ENST00000027335 CCNB3Q8WWL7 1395 aa6.86□□□□□ -1.31
CDH17-201ENST00000027335 CHMP4AQ9BY43 222 aa6.86□□□□□ -1.31
CDH17-201ENST00000027335 CARMIL2Q6F5E8 1435 aa6.85□□□□□ -1.31
CDH17-201ENST00000027335 NEO1Q92859 1461 aa6.85□□□□□ -1.31
CDH17-201ENST00000027335 SIN3AQ96ST3 1273 aa6.85□□□□□ -1.31
CDH17-201ENST00000027335 UACAQ9BZF9 1416 aa6.85□□□□□ -1.31
CDH17-201ENST00000027335 PTPRTO14522 1441 aa6.85□□□□□ -1.31
CDH17-201ENST00000027335 CDK11BP21127 795 aaKnown RBP6.85□□□□□ -1.31
CDH17-201ENST00000027335 CFDP1Q9UEE9 299 aaPredicted RBP6.85□□□□□ -1.31
CDH17-201ENST00000027335 TONSLQ96HA7 1378 aa6.84□□□□□ -1.31
CDH17-201ENST00000027335 TAF7LQ5H9L4 462 aa6.84□□□□□ -1.31
CDH17-201ENST00000027335 FMN1Q68DA7 1419 aa6.83□□□□□ -1.32
CDH17-201ENST00000027335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.83□□□□□ -1.32
CDH17-201ENST00000027335 IQGAP2Q13576 1575 aa6.83□□□□□ -1.32
CDH17-201ENST00000027335 FRMPD1Q5SYB0 1578 aa6.82□□□□□ -1.32
CDH17-201ENST00000027335 REREQ9P2R6 1566 aa6.82□□□□□ -1.32
CDH17-201ENST00000027335 BRD2P25440 801 aaKnown RBP6.82□□□□□ -1.32
CDH17-201ENST00000027335 SLC4A1APQ9BWU0 796 aaKnown RBP6.82□□□□□ -1.32
CDH17-201ENST00000027335 PTPRGP23470 1445 aa6.82□□□□□ -1.32
CDH17-201ENST00000027335 MAGI2Q86UL8 1455 aa6.82□□□□□ -1.32
CDH17-201ENST00000027335 ABCA8O94911 1581 aa6.82□□□□□ -1.32
CDH17-201ENST00000027335 MADDQ8WXG6 1647 aa6.82□□□□□ -1.32
CDH17-201ENST00000027335 KIAA0556O60303 1618 aa6.8□□□□□ -1.32
CDH17-201ENST00000027335 TSPY4P0CV99 314 aa6.8□□□□□ -1.32
CDH17-201ENST00000027335 TSPY10P0CW01 314 aa6.8□□□□□ -1.32
CDH17-201ENST00000027335 ZNF644Q9H582 1327 aaPredicted RBP6.8□□□□□ -1.32
CDH17-201ENST00000027335 DISP1Q96F81 1524 aa6.79□□□□□ -1.32
CDH17-201ENST00000027335 CERKQ8TCT0 537 aa6.79□□□□□ -1.32
CDH17-201ENST00000027335 FER1L4A9Z1Z3 1794 aa6.79□□□□□ -1.32
CDH17-201ENST00000027335 STRCQ7RTU9 1775 aa6.79□□□□□ -1.32
CDH17-201ENST00000027335 RICTORQ6R327 1708 aa6.79□□□□□ -1.32
CDH17-201ENST00000027335 LTBP4Q8N2S1 1624 aa6.79□□□□□ -1.32
CDH17-201ENST00000027335 DHX37Q8IY37 1157 aaKnown RBP6.78□□□□□ -1.32
CDH17-201ENST00000027335 ARHGEF12Q9NZN5 1544 aa6.78□□□□□ -1.32
CDH17-201ENST00000027335 EFCAB5A4FU69 1503 aa6.78□□□□□ -1.32
CDH17-201ENST00000027335 SENP3-EIF4A1A0A087X0R7 540 aa6.78□□□□□ -1.32
CDH17-201ENST00000027335 KDM2AQ9Y2K7 1162 aa6.78□□□□□ -1.32
CDH17-201ENST00000027335 RIMS1Q86UR5 1692 aaKnown RBP6.77□□□□□ -1.33
CDH17-201ENST00000027335 RAB3GAP2Q9H2M9 1393 aa6.77□□□□□ -1.33
CDH17-201ENST00000027335 HNRNPMP52272 730 aaKnown RBP eCLIP6.77□□□□□ -1.33
CDH17-201ENST00000027335 FKBP8Q14318 412 aa6.77□□□□□ -1.33
CDH17-201ENST00000027335 FAM9BQ8IZU0 186 aa6.77□□□□□ -1.33
CDH17-201ENST00000027335 HNRNPUQ00839 825 aaKnown RBP eCLIP6.76□□□□□ -1.33
CDH17-201ENST00000027335 FANCAO15360 1455 aa6.76□□□□□ -1.33
CDH17-201ENST00000027335 LRRC9Q6ZRR7 1453 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms