RNA–Protein interactions for RNA: ENST00000025008.9

RB1CC1-201, Transcript of RB1 inducible coiled-coil 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RB1CC1, Length 6,635 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1-201ENST00000025008 DCAF11Q8TEB1 546 aa20.17■□□□□ 0.82
RB1CC1-201ENST00000025008 RALBP1Q15311 655 aa20.17■□□□□ 0.82
RB1CC1-201ENST00000025008 KCNH8Q96L42 1107 aa20.16■□□□□ 0.82
RB1CC1-201ENST00000025008 SYAP1Q96A49 352 aaPredicted RBP20.15■□□□□ 0.82
RB1CC1-201ENST00000025008 RB1CC1Q8TDY2 1594 aa20.15■□□□□ 0.82
RB1CC1-201ENST00000025008 RSPH6AQ9H0K4 717 aa20.15■□□□□ 0.82
RB1CC1-201ENST00000025008 IPO8O15397 1037 aaKnown RBP20.14■□□□□ 0.82
RB1CC1-201ENST00000025008 SENP3Q9H4L4 574 aaPredicted RBP20.11■□□□□ 0.81
RB1CC1-201ENST00000025008 POGKQ9P215 609 aa20.11■□□□□ 0.81
RB1CC1-201ENST00000025008 PMFBP1Q8TBY8 1022 aa20.1■□□□□ 0.81
RB1CC1-201ENST00000025008 MORC1Q86VD1 984 aa20.09■□□□□ 0.81
RB1CC1-201ENST00000025008 NAP1L2Q9ULW6 460 aaPredicted RBP20.09■□□□□ 0.81
RB1CC1-201ENST00000025008 PDE3BQ13370 1112 aa20.09■□□□□ 0.81
RB1CC1-201ENST00000025008 HSP90AA2PQ14568 343 aaPredicted RBP20.07■□□□□ 0.8
RB1CC1-201ENST00000025008 AMER1Q5JTC6 1135 aaPredicted RBP20.07■□□□□ 0.8
RB1CC1-201ENST00000025008 FANCIQ9NVI1 1328 aa20.06■□□□□ 0.8
RB1CC1-201ENST00000025008 RAB3GAP2Q9H2M9 1393 aa20.06■□□□□ 0.8
RB1CC1-201ENST00000025008 PLEKHG5O94827 1062 aa20.05■□□□□ 0.8
RB1CC1-201ENST00000025008 ARHGAP35Q9NRY4 1499 aa20.05■□□□□ 0.8
RB1CC1-201ENST00000025008 HTATSF1O43719 755 aaKnown RBP20.04■□□□□ 0.8
RB1CC1-201ENST00000025008 CALD1Q05682 793 aaKnown RBP20.04■□□□□ 0.8
RB1CC1-201ENST00000025008 ARID3AQ99856 593 aa20.04■□□□□ 0.8
RB1CC1-201ENST00000025008 TNNT3P45378 269 aaPredicted RBP20.02■□□□□ 0.8
RB1CC1-201ENST00000025008 SOGA1O94964 1423 aa20.02■□□□□ 0.8
RB1CC1-201ENST00000025008 GSE1Q14687 1217 aa20.02■□□□□ 0.8
RB1CC1-201ENST00000025008 KIAA1211Q6ZU35 1233 aa20.02■□□□□ 0.8
RB1CC1-201ENST00000025008 TAOK2Q9UL54 1235 aa20.02■□□□□ 0.8
RB1CC1-201ENST00000025008 BAZ1BQ9UIG0 1483 aaKnown RBP20.02■□□□□ 0.79
RB1CC1-201ENST00000025008 MFAP1P55081 439 aaKnown RBP20.01■□□□□ 0.79
RB1CC1-201ENST00000025008 ITPRIPQ8IWB1 547 aa20■□□□□ 0.79
RB1CC1-201ENST00000025008 DDX11L8A8MPP1 907 aa20■□□□□ 0.79
RB1CC1-201ENST00000025008 TULP1O00294 542 aaPredicted RBP19.99■□□□□ 0.79
RB1CC1-201ENST00000025008 GOLGA2Q08379 1002 aa19.98■□□□□ 0.79
RB1CC1-201ENST00000025008 NLRP13Q86W25 1043 aa19.97■□□□□ 0.79
RB1CC1-201ENST00000025008 KANK4Q5T7N3 995 aaPredicted RBP19.96■□□□□ 0.79
RB1CC1-201ENST00000025008 PDE4AP27815 886 aa19.95■□□□□ 0.78
RB1CC1-201ENST00000025008 PKD2Q13563 968 aa19.95■□□□□ 0.78
RB1CC1-201ENST00000025008 ROCK2O75116 1388 aaKnown RBP19.95■□□□□ 0.78
RB1CC1-201ENST00000025008 CARMIL1Q5VZK9 1371 aa19.94■□□□□ 0.78
RB1CC1-201ENST00000025008 CSPP1Q1MSJ5 1256 aa19.94■□□□□ 0.78
RB1CC1-201ENST00000025008 PHLDB1Q86UU1 1377 aa19.93■□□□□ 0.78
RB1CC1-201ENST00000025008 KANK1Q14678 1352 aa19.93■□□□□ 0.78
RB1CC1-201ENST00000025008 PHF14O94880 888 aa19.93■□□□□ 0.78
RB1CC1-201ENST00000025008 APBB1O00213 710 aa19.92■□□□□ 0.78
RB1CC1-201ENST00000025008 TPM4P67936 248 aa19.92■□□□□ 0.78
RB1CC1-201ENST00000025008 FAM161AQ3B820 660 aa19.92■□□□□ 0.78
RB1CC1-201ENST00000025008 MPHOSPH9Q99550 1183 aa19.92■□□□□ 0.78
RB1CC1-201ENST00000025008 CENPQQ7L2Z9 268 aaPredicted RBP19.92■□□□□ 0.78
RB1CC1-201ENST00000025008 U2AF1L5P0DN76 240 aaPredicted RBP19.91■□□□□ 0.78
RB1CC1-201ENST00000025008 U2AF1Q01081 240 aaKnown RBP eCLIP19.91■□□□□ 0.78
RB1CC1-201ENST00000025008 GNL2Q13823 731 aaKnown RBP19.91■□□□□ 0.78
RB1CC1-201ENST00000025008 VSIG10Q8N0Z9 540 aa19.91■□□□□ 0.78
RB1CC1-201ENST00000025008 SRPK2P78362 688 aaKnown RBP19.91■□□□□ 0.78
RB1CC1-201ENST00000025008 CENPJQ9HC77 1338 aaPredicted RBP19.9■□□□□ 0.78
RB1CC1-201ENST00000025008 FMN1Q68DA7 1419 aa19.9■□□□□ 0.78
RB1CC1-201ENST00000025008 BAZ1AQ9NRL2 1556 aaPredicted RBP19.9■□□□□ 0.78
RB1CC1-201ENST00000025008 SKOR2Q2VWA4 1001 aaPredicted RBP19.89■□□□□ 0.78
RB1CC1-201ENST00000025008 RTF1Q92541 710 aaKnown RBP19.89■□□□□ 0.77
RB1CC1-201ENST00000025008 SMC4Q9NTJ3 1288 aa19.87■□□□□ 0.77
RB1CC1-201ENST00000025008 ZBED9Q6R2W3 1325 aa19.86■□□□□ 0.77
RB1CC1-201ENST00000025008 FOXD1Q16676 465 aa19.86■□□□□ 0.77
RB1CC1-201ENST00000025008 ST18O60284 1047 aa19.86■□□□□ 0.77
RB1CC1-201ENST00000025008 GOLGA6L1Q8N7Z2 621 aa19.86■□□□□ 0.77
RB1CC1-201ENST00000025008 HMMRO75330 724 aa19.85■□□□□ 0.77
RB1CC1-201ENST00000025008 HDGFL2Q7Z4V5 671 aaPredicted RBP19.84■□□□□ 0.77
RB1CC1-201ENST00000025008 L3MBTL2Q969R5 705 aa19.84■□□□□ 0.77
RB1CC1-201ENST00000025008 CUX2O14529 1486 aa19.83■□□□□ 0.76
RB1CC1-201ENST00000025008 KIF15Q9NS87 1388 aa19.82■□□□□ 0.76
RB1CC1-201ENST00000025008 CCDC34Q96HJ3 373 aa19.82■□□□□ 0.76
RB1CC1-201ENST00000025008 CHMP4AQ9BY43 222 aa19.81■□□□□ 0.76
RB1CC1-201ENST00000025008 DDX49Q9Y6V7 483 aaKnown RBP19.81■□□□□ 0.76
RB1CC1-201ENST00000025008 MYBBP1AQ9BQG0 1328 aaKnown RBP19.81■□□□□ 0.76
RB1CC1-201ENST00000025008 RRP1P56182 461 aaKnown RBP19.81■□□□□ 0.76
RB1CC1-201ENST00000025008 CLUAP1Q96AJ1 413 aa19.81■□□□□ 0.76
RB1CC1-201ENST00000025008 FOXD4L1Q9NU39 408 aa19.81■□□□□ 0.76
RB1CC1-201ENST00000025008 EIF3AQ14152 1382 aaKnown RBP19.8■□□□□ 0.76
RB1CC1-201ENST00000025008 DHX57Q6P158 1386 aaKnown RBP19.8■□□□□ 0.76
RB1CC1-201ENST00000025008 SLC4A3P48751 1232 aa19.79■□□□□ 0.76
RB1CC1-201ENST00000025008 NACADO15069 1562 aa19.78■□□□□ 0.76
RB1CC1-201ENST00000025008 LMOD2Q6P5Q4 547 aa19.78■□□□□ 0.76
RB1CC1-201ENST00000025008 PRKRIP1Q9H875 184 aaPredicted RBP19.78■□□□□ 0.76
RB1CC1-201ENST00000025008 NUP155O75694 1391 aa19.77■□□□□ 0.76
RB1CC1-201ENST00000025008 EXOC6Q8TAG9 804 aa19.77■□□□□ 0.76
RB1CC1-201ENST00000025008 NCBP3Q53F19 620 aaKnown RBP19.76■□□□□ 0.75
RB1CC1-201ENST00000025008 HDAC5Q9UQL6 1122 aa19.76■□□□□ 0.75
RB1CC1-201ENST00000025008 TRIM6-TRIM34B2RNG4 842 aa19.76■□□□□ 0.75
RB1CC1-201ENST00000025008 GPATCH3Q96I76 525 aa19.76■□□□□ 0.75
RB1CC1-201ENST00000025008 STK31Q9BXU1 1019 aa19.76■□□□□ 0.75
RB1CC1-201ENST00000025008 CGNL1Q0VF96 1302 aa19.75■□□□□ 0.75
RB1CC1-201ENST00000025008 ANKRD30AQ9BXX3 1397 aa19.75■□□□□ 0.75
RB1CC1-201ENST00000025008 NOC3LQ8WTT2 800 aaKnown RBP19.75■□□□□ 0.75
RB1CC1-201ENST00000025008 HDGFP51858 240 aaKnown RBP19.74■□□□□ 0.75
RB1CC1-201ENST00000025008 SAFB2Q14151 953 aaKnown RBP eCLIP19.73■□□□□ 0.754e-7■■□□□ 13.3
RB1CC1-201ENST00000025008 CCDC146Q8IYE0 955 aa19.73■□□□□ 0.75
RB1CC1-201ENST00000025008 KIF16BQ96L93 1317 aa19.73■□□□□ 0.75
RB1CC1-201ENST00000025008 ATP6V1DQ9Y5K8 247 aa19.73■□□□□ 0.75
RB1CC1-201ENST00000025008 KIF3AQ9Y496 699 aa19.72■□□□□ 0.75
RB1CC1-201ENST00000025008 EIF4G1Q04637 1599 aaKnown RBP19.72■□□□□ 0.75
RB1CC1-201ENST00000025008 SOX12O15370 315 aa19.71■□□□□ 0.75
RB1CC1-201ENST00000025008 CCDC88BA6NC98 1476 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms