RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 FAM69CQ0P6D2 419 aa15.54■□□□□ 0.08
CD4-201ENST00000011653 WDR7Q9Y4E6 1490 aa15.54■□□□□ 0.08
CD4-201ENST00000011653 PTPRKQ15262 1439 aa15.53■□□□□ 0.08
CD4-201ENST00000011653 ARHGAP5Q13017 1502 aa15.53■□□□□ 0.08
CD4-201ENST00000011653 EFCAB2Q5VUJ9 269 aa15.52■□□□□ 0.08
CD4-201ENST00000011653 ABCC10Q5T3U5 1492 aa15.52■□□□□ 0.07
CD4-201ENST00000011653 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.52■□□□□ 0.07
CD4-201ENST00000011653 TTC37Q6PGP7 1564 aa15.52■□□□□ 0.07
CD4-201ENST00000011653 TSPY4P0CV99 314 aa15.51■□□□□ 0.07
CD4-201ENST00000011653 TSPY10P0CW01 314 aa15.51■□□□□ 0.07
CD4-201ENST00000011653 MIA2Q96PC5 1412 aa15.5■□□□□ 0.07
CD4-201ENST00000011653 TRIM52Q96A61 297 aa15.5■□□□□ 0.07
CD4-201ENST00000011653 CAMSAP2Q08AD1 1489 aa15.49■□□□□ 0.07
CD4-201ENST00000011653 TRHP20396 242 aaPredicted RBP15.49■□□□□ 0.07
CD4-201ENST00000011653 RAB3GAP2Q9H2M9 1393 aa15.48■□□□□ 0.07
CD4-201ENST00000011653 AFAP1Q8N556 730 aa15.48■□□□□ 0.07
CD4-201ENST00000011653 DIEXFQ68CQ4 756 aaKnown RBP15.46■□□□□ 0.07
CD4-201ENST00000011653 CDC42BPAQ5VT25 1732 aa15.46■□□□□ 0.07
CD4-201ENST00000011653 ABCC5O15440 1437 aa15.45■□□□□ 0.06
CD4-201ENST00000011653 DNAJC5Q9H3Z4 198 aa15.45■□□□□ 0.06
CD4-201ENST00000011653 CD109Q6YHK3 1445 aa15.45■□□□□ 0.06
CD4-201ENST00000011653 SETD5Q9C0A6 1442 aa15.45■□□□□ 0.06
CD4-201ENST00000011653 DAPK1P53355 1430 aa15.44■□□□□ 0.06
CD4-201ENST00000011653 PLCH2O75038 1416 aa15.43■□□□□ 0.06
CD4-201ENST00000011653 ITSN2Q9NZM3 1697 aa15.43■□□□□ 0.06
CD4-201ENST00000011653 ACIN1Q9UKV3 1341 aaKnown RBP15.42■□□□□ 0.06
CD4-201ENST00000011653 TCOF1Q13428 1488 aaKnown RBP15.42■□□□□ 0.06
CD4-201ENST00000011653 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.41■□□□□ 0.06
CD4-201ENST00000011653 CDC42BPBQ9Y5S2 1711 aa15.41■□□□□ 0.06
CD4-201ENST00000011653 RAPGEF3O95398 923 aa15.41■□□□□ 0.06
CD4-201ENST00000011653 FANCAO15360 1455 aa15.4■□□□□ 0.06
CD4-201ENST00000011653 SYCP2Q9BX26 1530 aa15.4■□□□□ 0.06
CD4-201ENST00000011653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.4■□□□□ 0.06
CD4-201ENST00000011653 MYO5CQ9NQX4 1742 aa15.39■□□□□ 0.05
CD4-201ENST00000011653 SAMD9LQ8IVG5 1584 aa15.38■□□□□ 0.05
CD4-201ENST00000011653 SCAPERQ9BY12 1400 aa15.38■□□□□ 0.05
CD4-201ENST00000011653 NEUROD1Q13562 356 aa15.37■□□□□ 0.05
CD4-201ENST00000011653 PREX2Q70Z35 1606 aa15.37■□□□□ 0.05
CD4-201ENST00000011653 CENPBP07199 599 aaPredicted RBP15.37■□□□□ 0.05
CD4-201ENST00000011653 TRAPPC8Q9Y2L5 1435 aa15.37■□□□□ 0.05
CD4-201ENST00000011653 SPAG9O60271 1321 aaKnown RBP15.37■□□□□ 0.05
CD4-201ENST00000011653 FOXD1Q16676 465 aa15.37■□□□□ 0.05
CD4-201ENST00000011653 NAIPQ13075 1403 aa15.37■□□□□ 0.05
CD4-201ENST00000011653 C9orf84Q5VXU9 1444 aa15.36■□□□□ 0.05
CD4-201ENST00000011653 ARHGEF12Q9NZN5 1544 aa15.35■□□□□ 0.05
CD4-201ENST00000011653 TSPOAP1O95153 1857 aa15.35■□□□□ 0.05
CD4-201ENST00000011653 ANKRD30AQ9BXX3 1397 aa15.35■□□□□ 0.05
CD4-201ENST00000011653 ADGRL1O94910 1474 aa15.35■□□□□ 0.05
CD4-201ENST00000011653 MBD5Q9P267 1494 aa15.33■□□□□ 0.05
CD4-201ENST00000011653 AKNAQ7Z591 1439 aa15.33■□□□□ 0.04
CD4-201ENST00000011653 DNMT1P26358 1616 aaKnown RBP15.33■□□□□ 0.04
CD4-201ENST00000011653 DHX57Q6P158 1386 aaKnown RBP15.33■□□□□ 0.04
CD4-201ENST00000011653 HFM1A2PYH4 1435 aa15.33■□□□□ 0.04
CD4-201ENST00000011653 ZNF316A6NFI3 1004 aaPredicted RBP15.33■□□□□ 0.04
CD4-201ENST00000011653 CCDC141Q6ZP82 1450 aa15.32■□□□□ 0.04
CD4-201ENST00000011653 KIF15Q9NS87 1388 aa15.32■□□□□ 0.04
CD4-201ENST00000011653 NCOA1Q15788 1441 aa15.32■□□□□ 0.04
CD4-201ENST00000011653 SIN3AQ96ST3 1273 aa15.32■□□□□ 0.04
CD4-201ENST00000011653 ABCA9Q8IUA7 1624 aa15.31■□□□□ 0.04
CD4-201ENST00000011653 RSPH4AQ5TD94 716 aa15.31■□□□□ 0.04
CD4-201ENST00000011653 MAPKBP1O60336 1514 aa15.31■□□□□ 0.04
CD4-201ENST00000011653 SLC4A1APQ9BWU0 796 aaKnown RBP15.3■□□□□ 0.04
CD4-201ENST00000011653 KDM6BO15054 1643 aa15.29■□□□□ 0.04
CD4-201ENST00000011653 ANKRD50Q9ULJ7 1429 aa15.27■□□□□ 0.04
CD4-201ENST00000011653 PLEKHH2Q8IVE3 1493 aa15.27■□□□□ 0.04
CD4-201ENST00000011653 KIAA1107Q9UPP5 1409 aa15.26■□□□□ 0.03
CD4-201ENST00000011653 MPHOSPH9Q99550 1183 aa15.26■□□□□ 0.03
CD4-201ENST00000011653 ABCC1P33527 1531 aa15.25■□□□□ 0.03
CD4-201ENST00000011653 KIF3BO15066 747 aa15.25■□□□□ 0.03
CD4-201ENST00000011653 ROCK1Q13464 1354 aa15.25■□□□□ 0.03
CD4-201ENST00000011653 NUP155O75694 1391 aa15.25■□□□□ 0.03
CD4-201ENST00000011653 DIP2BQ9P265 1576 aa15.25■□□□□ 0.03
CD4-201ENST00000011653 GGT6Q6P531 493 aa15.23■□□□□ 0.03
CD4-201ENST00000011653 GTF3C3Q9Y5Q9 886 aa15.22■□□□□ 0.03
CD4-201ENST00000011653 PKD2Q13563 968 aa15.21■□□□□ 0.03
CD4-201ENST00000011653 ARHGEF5Q12774 1597 aa15.21■□□□□ 0.02
CD4-201ENST00000011653 MLECQ14165 292 aa15.21■□□□□ 0.02
CD4-201ENST00000011653 DENND4BO75064 1496 aaPredicted RBP15.2■□□□□ 0.02
CD4-201ENST00000011653 CROCC2H7BZ55 1655 aa15.18■□□□□ 0.02
CD4-201ENST00000011653 SHANK2Q9UPX8 1470 aa15.18■□□□□ 0.02
CD4-201ENST00000011653 ARAP3Q8WWN8 1544 aa15.17■□□□□ 0.02
CD4-201ENST00000011653 ADGRL2O95490 1459 aa15.17■□□□□ 0.02
CD4-201ENST00000011653 ZNF518AQ6AHZ1 1483 aa15.17■□□□□ 0.02
CD4-201ENST00000011653 MAP3K4Q9Y6R4 1608 aa15.16■□□□□ 0.02
CD4-201ENST00000011653 POGZQ7Z3K3 1410 aa15.16■□□□□ 0.02
CD4-201ENST00000011653 ADGBQ8N7X0 1667 aa15.16■□□□□ 0.02
CD4-201ENST00000011653 NEO1Q92859 1461 aa15.15■□□□□ 0.02
CD4-201ENST00000011653 GCC2Q8IWJ2 1684 aa15.15■□□□□ 0.02
CD4-201ENST00000011653 PLPPR3Q6T4P5 718 aa15.15■□□□□ 0.02
CD4-201ENST00000011653 ATP7AQ04656 1500 aa15.14■□□□□ 0.01
CD4-201ENST00000011653 ARID4BQ4LE39 1312 aaPredicted RBP15.14■□□□□ 0.01
CD4-201ENST00000011653 YEATS2Q9ULM3 1422 aa15.14■□□□□ 0.01
CD4-201ENST00000011653 GLI2P10070 1586 aa15.14■□□□□ 0.01
CD4-201ENST00000011653 BCL11AQ9H165 835 aa15.14■□□□□ 0.01
CD4-201ENST00000011653 KIF13AQ9H1H9 1805 aa15.14■□□□□ 0.01
CD4-201ENST00000011653 TEX14Q8IWB6 1497 aa15.13■□□□□ 0.01
CD4-201ENST00000011653 COL17A1Q9UMD9 1497 aaPredicted RBP15.13■□□□□ 0.01
CD4-201ENST00000011653 ZFYVE16Q7Z3T8 1539 aa15.12■□□□□ 0.01
CD4-201ENST00000011653 CLSPNQ9HAW4 1339 aa15.1■□□□□ 0.01
CD4-201ENST00000011653 CFAP74Q9C0B2 1584 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms