RNA–Protein interactions for RNA: ENSMUST00000198180.4

Csde1-211, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Csde1, Length 3,849 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-211ENSMUST00000198180 Dhx57Q6P5D3 1388 aaKnown RBP10.43□□□□□ -0.74
Csde1-211ENSMUST00000198180 Arhgap31A6X8Z5 1425 aa10.43□□□□□ -0.74
Csde1-211ENSMUST00000198180 Slx4Q6P1D7 1565 aa10.43□□□□□ -0.74
Csde1-211ENSMUST00000198180 Vps8Q0P5W1 1427 aa10.42□□□□□ -0.74
Csde1-211ENSMUST00000198180 Ifit1bl1D3Z6F0 470 aa10.42□□□□□ -0.74
Csde1-211ENSMUST00000198180 Anp32aO35381 247 aa10.42□□□□□ -0.74
Csde1-211ENSMUST00000198180 Ppp4r2Q0VGB7 417 aa10.42□□□□□ -0.74
Csde1-211ENSMUST00000198180 Exoc6Q8R313 802 aa10.42□□□□□ -0.74
Csde1-211ENSMUST00000198180 Grin2aP35436 1464 aa10.41□□□□□ -0.74
Csde1-211ENSMUST00000198180 Gm13695A2AK44 830 aa10.4□□□□□ -0.74
Csde1-211ENSMUST00000198180 Ofd1Q80Z25 1017 aa10.4□□□□□ -0.74
Csde1-211ENSMUST00000198180 Gm20521D3Z5F7 333 aa10.4□□□□□ -0.75
Csde1-211ENSMUST00000198180 3425401B19RikD3Z1D3 1412 aa10.39□□□□□ -0.75
Csde1-211ENSMUST00000198180 Polr3glQ8R0C0 218 aa10.39□□□□□ -0.75
Csde1-211ENSMUST00000198180 Samd9lQ69Z37 1561 aa10.39□□□□□ -0.75
Csde1-211ENSMUST00000198180 Soga1E1U8D0 1418 aa10.38□□□□□ -0.75
Csde1-211ENSMUST00000198180 Kif3bQ61771 747 aa10.38□□□□□ -0.75
Csde1-211ENSMUST00000198180 Ankrd36D3Z4K0 1415 aa10.38□□□□□ -0.75
Csde1-211ENSMUST00000198180 Srpk2O54781 681 aaKnown RBP10.37□□□□□ -0.75
Csde1-211ENSMUST00000198180 A2mQ6GQT1 1474 aa10.37□□□□□ -0.75
Csde1-211ENSMUST00000198180 Lemd3Q9WU40 921 aa10.36□□□□□ -0.75
Csde1-211ENSMUST00000198180 Rangap1P46061 589 aaKnown RBP10.36□□□□□ -0.75
Csde1-211ENSMUST00000198180 Ift140E9PY46 1464 aa10.36□□□□□ -0.75
Csde1-211ENSMUST00000198180 Naip2Q9QUK4 1447 aa10.36□□□□□ -0.75
Csde1-211ENSMUST00000198180 NexmifQ5DTT1 1515 aa10.35□□□□□ -0.75
Csde1-211ENSMUST00000198180 Fam135aQ6NS59 1506 aa10.35□□□□□ -0.75
Csde1-211ENSMUST00000198180 Cnga1P29974 684 aa10.35□□□□□ -0.75
Csde1-211ENSMUST00000198180 Gpatch8A2A6A1 1505 aa10.34□□□□□ -0.75
Csde1-211ENSMUST00000198180 Gm1043A0A140LJC2 1431 aa10.34□□□□□ -0.75
Csde1-211ENSMUST00000198180 Thoc2B1AZI6 1594 aaKnown RBP10.34□□□□□ -0.75
Csde1-211ENSMUST00000198180 Wdr43Q6ZQL4 677 aaKnown RBP10.33□□□□□ -0.76
Csde1-211ENSMUST00000198180 Mug1P28665 1476 aa10.33□□□□□ -0.76
Csde1-211ENSMUST00000198180 Ncoa2Q61026 1462 aa10.33□□□□□ -0.76
Csde1-211ENSMUST00000198180 Eif4g1Q6NZJ6 1600 aaKnown RBP10.32□□□□□ -0.76
Csde1-211ENSMUST00000198180 Ttll5Q8CHB8 1328 aa10.32□□□□□ -0.76
Csde1-211ENSMUST00000198180 Pla2r1Q62028 1487 aa10.32□□□□□ -0.76
Csde1-211ENSMUST00000198180 Dhx9O70133 1380 aaKnown RBP10.32□□□□□ -0.76
Csde1-211ENSMUST00000198180 Disp1Q3TDN0 1521 aa10.32□□□□□ -0.76
Csde1-211ENSMUST00000198180 Smg6P61406 1418 aaKnown RBP10.31□□□□□ -0.76
Csde1-211ENSMUST00000198180 PxdnQ3UQ28 1475 aa10.31□□□□□ -0.76
Csde1-211ENSMUST00000198180 Spag9Q58A65 1321 aaKnown RBP10.31□□□□□ -0.76
Csde1-211ENSMUST00000198180 Abcc5Q9R1X5 1436 aa10.3□□□□□ -0.76
Csde1-211ENSMUST00000198180 TchhA0A0B4J1F9 1599 aa10.3□□□□□ -0.76
Csde1-211ENSMUST00000198180 Fgd6Q69ZL1 1399 aa10.3□□□□□ -0.76
Csde1-211ENSMUST00000198180 Dapk1Q80YE7 1442 aa10.3□□□□□ -0.76
Csde1-211ENSMUST00000198180 Neo1P97798 1493 aa10.3□□□□□ -0.76
Csde1-211ENSMUST00000198180 Ppp1r18Q8BQ30 594 aa10.29□□□□□ -0.76
Csde1-211ENSMUST00000198180 Fam163aQ8CAA5 168 aa10.29□□□□□ -0.76
Csde1-211ENSMUST00000198180 Map3k5O35099 1380 aa10.29□□□□□ -0.76
Csde1-211ENSMUST00000198180 Kif21aQ9QXL2 1672 aa10.29□□□□□ -0.76
Csde1-211ENSMUST00000198180 Fam71e1A1L3C1 212 aa10.28□□□□□ -0.76
Csde1-211ENSMUST00000198180 Apbb1Q9QXJ1 710 aa10.28□□□□□ -0.76
Csde1-211ENSMUST00000198180 Ncoa3O09000 1398 aa10.28□□□□□ -0.76
Csde1-211ENSMUST00000198180 Neurod2Q62414 383 aa10.28□□□□□ -0.76
Csde1-211ENSMUST00000198180 Unc13aQ4KUS2 1712 aa10.28□□□□□ -0.76
Csde1-211ENSMUST00000198180 Stag3O70576 1240 aa10.27□□□□□ -0.76
Csde1-211ENSMUST00000198180 Trim26Q99PN3 545 aa10.27□□□□□ -0.77
Csde1-211ENSMUST00000198180 Ccdc141E9Q8Q6 1531 aa10.27□□□□□ -0.77
Csde1-211ENSMUST00000198180 BC005561E9Q5E2 1589 aa10.27□□□□□ -0.77
Csde1-211ENSMUST00000198180 Srcin1Q9QWI6 1250 aa10.27□□□□□ -0.77
Csde1-211ENSMUST00000198180 WizO88286 1684 aaKnown RBP10.27□□□□□ -0.77
Csde1-211ENSMUST00000198180 Slc4a3P16283 1227 aa10.26□□□□□ -0.77
Csde1-211ENSMUST00000198180 Ecm2Q5FW85 670 aa10.26□□□□□ -0.77
Csde1-211ENSMUST00000198180 Fan1Q69ZT1 1020 aa10.26□□□□□ -0.77
Csde1-211ENSMUST00000198180 Safb2Q80YR5 991 aaKnown RBP10.26□□□□□ -0.77
Csde1-211ENSMUST00000198180 Stk26Q99JT2 416 aa10.26□□□□□ -0.77
Csde1-211ENSMUST00000198180 IqubQ8CDK3 788 aa10.25□□□□□ -0.77
Csde1-211ENSMUST00000198180 Exosc9Q9JHI7 438 aaKnown RBP10.25□□□□□ -0.77
Csde1-211ENSMUST00000198180 Rock2P70336 1388 aa10.25□□□□□ -0.77
Csde1-211ENSMUST00000198180 Slc4a1apE9PX68 744 aa10.25□□□□□ -0.77
Csde1-211ENSMUST00000198180 Pde4cQ3UEI1 686 aa10.25□□□□□ -0.77
Csde1-211ENSMUST00000198180 Gm14025A2AP89 1413 aa10.24□□□□□ -0.77
Csde1-211ENSMUST00000198180 Magi1Q6RHR9 1471 aa10.24□□□□□ -0.77
Csde1-211ENSMUST00000198180 Gtf2e1Q9D0D5 440 aa10.24□□□□□ -0.77
Csde1-211ENSMUST00000198180 Magi3Q9EQJ9 1476 aa10.24□□□□□ -0.77
Csde1-211ENSMUST00000198180 Arhgap5P97393 1501 aa10.24□□□□□ -0.77
Csde1-211ENSMUST00000198180 Pabpn1Q8CCS6 302 aaKnown RBP10.23□□□□□ -0.77
Csde1-211ENSMUST00000198180 Pank3Q8R2W9 370 aa10.23□□□□□ -0.77
Csde1-211ENSMUST00000198180 Upf2A2AT37 1269 aaKnown RBP10.22□□□□□ -0.77
Csde1-211ENSMUST00000198180 Zscan21Q07231 555 aa10.22□□□□□ -0.77
Csde1-211ENSMUST00000198180 Inpp5dQ9ES52 1191 aa10.22□□□□□ -0.77
Csde1-211ENSMUST00000198180 Il16O54824 1322 aa10.22□□□□□ -0.77
Csde1-211ENSMUST00000198180 Erich3F6QRE9 1637 aa10.22□□□□□ -0.77
Csde1-211ENSMUST00000198180 Znf710Q3U288 666 aa10.22□□□□□ -0.77
Csde1-211ENSMUST00000198180 ArxO35085 564 aa10.21□□□□□ -0.77
Csde1-211ENSMUST00000198180 Tmf1B9EKI3 1091 aa10.21□□□□□ -0.77
Csde1-211ENSMUST00000198180 Dcaf11Q91VU6 549 aa10.21□□□□□ -0.78
Csde1-211ENSMUST00000198180 Cd109Q8R422 1442 aa10.19□□□□□ -0.78
Csde1-211ENSMUST00000198180 Naip5Q9R016 1403 aa10.18□□□□□ -0.78
Csde1-211ENSMUST00000198180 Slc4a2P13808 1237 aaKnown RBP10.18□□□□□ -0.78
Csde1-211ENSMUST00000198180 Lmo7E9PYF4 1699 aaKnown RBP10.17□□□□□ -0.78
Csde1-211ENSMUST00000198180 Shroom2A2ALU4 1481 aa10.17□□□□□ -0.78
Csde1-211ENSMUST00000198180 Mak16Q8BGS0 296 aaKnown RBP10.17□□□□□ -0.78
Csde1-211ENSMUST00000198180 CrbnQ8C7D2 445 aa10.16□□□□□ -0.78
Csde1-211ENSMUST00000198180 Prdm16A2A935 1275 aa10.16□□□□□ -0.78
Csde1-211ENSMUST00000198180 Usp40Q8BWR4 1235 aa10.16□□□□□ -0.78
Csde1-211ENSMUST00000198180 Rpgrip1lQ8CG73 1264 aa10.15□□□□□ -0.78
Csde1-211ENSMUST00000198180 NgefQ8CHT1 710 aa10.15□□□□□ -0.78
Csde1-211ENSMUST00000198180 Speer4f1Q9D5Q6 258 aa10.14□□□□□ -0.79
Csde1-211ENSMUST00000198180 Nup160Q9Z0W3 1402 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 72.6 ms