RNA–Protein interactions for RNA: ENSMUST00000176745.7

Cux1-211, Transcript of Homeobox protein cut-like 1, mousemouse

TSL 1 (best) BASIC

Gene Cux1, Length 2,831 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-211ENSMUST00000176745 BlmO88700 1416 aa13.88□□□□□ -0.19
Cux1-211ENSMUST00000176745 Rtn4Q99P72 1162 aaKnown RBP13.87□□□□□ -0.19
Cux1-211ENSMUST00000176745 Znf316Q6PGE4 1016 aa13.87□□□□□ -0.19
Cux1-211ENSMUST00000176745 Dnmt1P13864 1620 aaKnown RBP13.87□□□□□ -0.19
Cux1-211ENSMUST00000176745 Washc2Q6PGL7 1334 aa13.86□□□□□ -0.19
Cux1-211ENSMUST00000176745 Pak3Q61036 559 aa13.85□□□□□ -0.19
Cux1-211ENSMUST00000176745 CntlnA2AM05 1397 aa13.85□□□□□ -0.19
Cux1-211ENSMUST00000176745 Slc24a1Q91WD8 1130 aa13.85□□□□□ -0.19
Cux1-211ENSMUST00000176745 Slx4Q6P1D7 1565 aa13.81□□□□□ -0.2
Cux1-211ENSMUST00000176745 Shroom2A2ALU4 1481 aa13.81□□□□□ -0.2
Cux1-211ENSMUST00000176745 Taok2Q6ZQ29 1240 aa13.81□□□□□ -0.2
Cux1-211ENSMUST00000176745 Naip1Q9QWK5 1403 aa13.81□□□□□ -0.2
Cux1-211ENSMUST00000176745 Fgd6Q69ZL1 1399 aa13.81□□□□□ -0.2
Cux1-211ENSMUST00000176745 NgefQ8CHT1 710 aa13.81□□□□□ -0.2
Cux1-211ENSMUST00000176745 TimelessQ9R1X4 1197 aa13.8□□□□□ -0.2
Cux1-211ENSMUST00000176745 Gm13697A2AK42 830 aa13.78□□□□□ -0.2
Cux1-211ENSMUST00000176745 Liat1Q810M6 228 aa13.78□□□□□ -0.2
Cux1-211ENSMUST00000176745 BC005561E9Q5E2 1589 aa13.78□□□□□ -0.2
Cux1-211ENSMUST00000176745 NeflP08551 543 aa13.77□□□□□ -0.21
Cux1-211ENSMUST00000176745 Eif5bQ05D44 1216 aaKnown RBP13.77□□□□□ -0.21
Cux1-211ENSMUST00000176745 Aebp1Q640N1 1128 aa13.77□□□□□ -0.21
Cux1-211ENSMUST00000176745 UacaQ8CGB3 1411 aa13.76□□□□□ -0.21
Cux1-211ENSMUST00000176745 Smg6P61406 1418 aaKnown RBP13.75□□□□□ -0.21
Cux1-211ENSMUST00000176745 Rrbp1Q99PL5 1605 aaKnown RBP13.75□□□□□ -0.21
Cux1-211ENSMUST00000176745 Pdcl3Q8BVF2 240 aa13.74□□□□□ -0.21
Cux1-211ENSMUST00000176745 Egfem1Q8C088 590 aa13.74□□□□□ -0.21
Cux1-211ENSMUST00000176745 4933416C03RikQ3V063 378 aa13.73□□□□□ -0.21
Cux1-211ENSMUST00000176745 Zcchc11B2RX14 1644 aaKnown RBP13.73□□□□□ -0.21
Cux1-211ENSMUST00000176745 Gm1043A0A140LJC2 1431 aa13.73□□□□□ -0.21
Cux1-211ENSMUST00000176745 Rapgef6Q5NCJ1 1609 aa13.73□□□□□ -0.21
Cux1-211ENSMUST00000176745 WrnO09053 1401 aa13.71□□□□□ -0.21
Cux1-211ENSMUST00000176745 DmtnQ9WV69 405 aa13.71□□□□□ -0.22
Cux1-211ENSMUST00000176745 Hspa5P20029 655 aaKnown RBP13.7□□□□□ -0.22
Cux1-211ENSMUST00000176745 Chd1P40201 1711 aa13.7□□□□□ -0.22
Cux1-211ENSMUST00000176745 Dnttip2Q8R2M2 758 aaKnown RBP13.7□□□□□ -0.22
Cux1-211ENSMUST00000176745 Arhgef12Q8R4H2 1543 aaKnown RBP13.69□□□□□ -0.22
Cux1-211ENSMUST00000176745 Arhgap27A2AB59 869 aa13.69□□□□□ -0.22
Cux1-211ENSMUST00000176745 Sin3aQ60520 1274 aaKnown RBP13.68□□□□□ -0.22
Cux1-211ENSMUST00000176745 Fam50aQ9WV03 339 aaKnown RBP13.68□□□□□ -0.22
Cux1-211ENSMUST00000176745 Kif27Q7M6Z4 1394 aa13.68□□□□□ -0.22
Cux1-211ENSMUST00000176745 Ccer2J3QPU5 274 aa13.68□□□□□ -0.22
Cux1-211ENSMUST00000176745 Neo1P97798 1493 aa13.67□□□□□ -0.22
Cux1-211ENSMUST00000176745 Lmtk2Q3TYD6 1471 aa13.67□□□□□ -0.22
Cux1-211ENSMUST00000176745 Rbm10Q99KG3 930 aaKnown RBP13.67□□□□□ -0.22
Cux1-211ENSMUST00000176745 Abcc1O35379 1528 aa13.66□□□□□ -0.22
Cux1-211ENSMUST00000176745 P3h3Q8CG70 732 aa13.66□□□□□ -0.22
Cux1-211ENSMUST00000176745 Arhgef11Q68FM7 1552 aa13.66□□□□□ -0.22
Cux1-211ENSMUST00000176745 Ncoa2Q61026 1462 aa13.65□□□□□ -0.22
Cux1-211ENSMUST00000176745 Gcc2Q8CHG3 1679 aa13.65□□□□□ -0.22
Cux1-211ENSMUST00000176745 Gtf2a1Q99PM3 378 aa13.64□□□□□ -0.23
Cux1-211ENSMUST00000176745 Znf692Q3U381 531 aa13.64□□□□□ -0.23
Cux1-211ENSMUST00000176745 Slc4a3P16283 1227 aa13.63□□□□□ -0.23
Cux1-211ENSMUST00000176745 Ipo9Q91YE6 1041 aa13.63□□□□□ -0.23
Cux1-211ENSMUST00000176745 Ccdc141E9Q8Q6 1531 aa13.63□□□□□ -0.23
Cux1-211ENSMUST00000176745 Kiaa1210E9Q0C6 1637 aa13.63□□□□□ -0.23
Cux1-211ENSMUST00000176745 Gm14025A2AP89 1413 aa13.62□□□□□ -0.23
Cux1-211ENSMUST00000176745 Cdc42bpaQ3UU96 1719 aa13.62□□□□□ -0.23
Cux1-211ENSMUST00000176745 Kiaa1551Q5DTW7 1521 aa13.62□□□□□ -0.23
Cux1-211ENSMUST00000176745 AknaQ80VW7 1404 aa13.61□□□□□ -0.23
Cux1-211ENSMUST00000176745 Arhgap31A6X8Z5 1425 aa13.6□□□□□ -0.23
Cux1-211ENSMUST00000176745 Mroh2aD3Z750 1679 aa13.6□□□□□ -0.23
Cux1-211ENSMUST00000176745 DaxxO35613 739 aa13.6□□□□□ -0.23
Cux1-211ENSMUST00000176745 Jph4Q80WT0 628 aa13.6□□□□□ -0.23
Cux1-211ENSMUST00000176745 Ankrd36D3Z4K0 1415 aa13.6□□□□□ -0.23
Cux1-211ENSMUST00000176745 Mug1P28665 1476 aa13.59□□□□□ -0.23
Cux1-211ENSMUST00000176745 Mrs2Q5NCE8 434 aa13.59□□□□□ -0.23
Cux1-211ENSMUST00000176745 Chrna2Q91X60 512 aa13.59□□□□□ -0.23
Cux1-211ENSMUST00000176745 Dhx57Q6P5D3 1388 aaKnown RBP13.58□□□□□ -0.24
Cux1-211ENSMUST00000176745 Wdr7Q920I9 1489 aa13.57□□□□□ -0.24
Cux1-211ENSMUST00000176745 Armcx1Q9CX83 456 aa13.57□□□□□ -0.24
Cux1-211ENSMUST00000176745 Cul7Q8VE73 1689 aa13.57□□□□□ -0.24
Cux1-211ENSMUST00000176745 NexmifQ5DTT1 1515 aa13.57□□□□□ -0.24
Cux1-211ENSMUST00000176745 Mapkbp1Q6NS57 1503 aa13.57□□□□□ -0.24
Cux1-211ENSMUST00000176745 Magi1Q6RHR9 1471 aa13.56□□□□□ -0.24
Cux1-211ENSMUST00000176745 Ncoa3O09000 1398 aa13.56□□□□□ -0.24
Cux1-211ENSMUST00000176745 Iqcf3Q9D498 203 aa13.56□□□□□ -0.24
Cux1-211ENSMUST00000176745 NhsB1AV60 1647 aa13.56□□□□□ -0.24
Cux1-211ENSMUST00000176745 Camsap2Q8C1B1 1461 aa13.55□□□□□ -0.24
Cux1-211ENSMUST00000176745 Vgll3P85442 326 aa13.55□□□□□ -0.24
Cux1-211ENSMUST00000176745 Fam163aQ8CAA5 168 aa13.55□□□□□ -0.24
Cux1-211ENSMUST00000176745 Rrp9Q91WM3 475 aaKnown RBP13.55□□□□□ -0.24
Cux1-211ENSMUST00000176745 Slc4a2P13808 1237 aaKnown RBP13.54□□□□□ -0.24
Cux1-211ENSMUST00000176745 Zbtb4Q5F293 982 aa13.54□□□□□ -0.24
Cux1-211ENSMUST00000176745 Fancd2Q80V62 1450 aa13.53□□□□□ -0.24
Cux1-211ENSMUST00000176745 Fam208aQ69ZR9 1610 aaKnown RBP13.52□□□□□ -0.25
Cux1-211ENSMUST00000176745 Pabpn1Q8CCS6 302 aaKnown RBP13.51□□□□□ -0.25
Cux1-211ENSMUST00000176745 Fhad1A6PWD2 1420 aa13.51□□□□□ -0.25
Cux1-211ENSMUST00000176745 Wwc2Q6NXJ0 1187 aa13.5□□□□□ -0.25
Cux1-211ENSMUST00000176745 Tcerg1Q8CGF7 1100 aaKnown RBP13.5□□□□□ -0.25
Cux1-211ENSMUST00000176745 Gapvd1Q6PAR5 1458 aa13.5□□□□□ -0.25
Cux1-211ENSMUST00000176745 3425401B19RikD3Z1D3 1412 aa13.5□□□□□ -0.25
Cux1-211ENSMUST00000176745 Anp32bQ9EST5 272 aaKnown RBP13.49□□□□□ -0.25
Cux1-211ENSMUST00000176745 Naip5Q9R016 1403 aa13.49□□□□□ -0.25
Cux1-211ENSMUST00000176745 Ccnb3Q810T2 1396 aa13.48□□□□□ -0.25
Cux1-211ENSMUST00000176745 Cep170Q6A065 1588 aa13.48□□□□□ -0.25
Cux1-211ENSMUST00000176745 Kcnh8P59111 1102 aa13.48□□□□□ -0.25
Cux1-211ENSMUST00000176745 Ythdc2B2RR83 1445 aaKnown RBP13.48□□□□□ -0.25
Cux1-211ENSMUST00000176745 Prex2Q3LAC4 1598 aa13.47□□□□□ -0.25
Cux1-211ENSMUST00000176745 Igf1rQ60751 1373 aa13.47□□□□□ -0.25
Cux1-211ENSMUST00000176745 Lmod2Q3UHZ5 550 aa13.47□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms