RNA–Protein interactions for RNA: ENSMUST00000171342.2

Rnf41-202, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,283 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-202ENSMUST00000171342 Magi1Q6RHR9 1471 aa13.95□□□□□ -0.18
Rnf41-202ENSMUST00000171342 Fam163aQ8CAA5 168 aa13.95□□□□□ -0.18
Rnf41-202ENSMUST00000171342 Pkd2O35245 966 aa13.94□□□□□ -0.18
Rnf41-202ENSMUST00000171342 Arhgef40Q3UPH7 1517 aa13.93□□□□□ -0.18
Rnf41-202ENSMUST00000171342 Ankrd36D3Z4K0 1415 aa13.92□□□□□ -0.18
Rnf41-202ENSMUST00000171342 Rrp7aQ9D1C9 280 aaKnown RBP13.9□□□□□ -0.18
Rnf41-202ENSMUST00000171342 Hnrnpul2Q00PI9 745 aaKnown RBP13.89□□□□□ -0.19
Rnf41-202ENSMUST00000171342 Gm14025A2AP89 1413 aa13.89□□□□□ -0.19
Rnf41-202ENSMUST00000171342 Sin3aQ60520 1274 aaKnown RBP13.88□□□□□ -0.19
Rnf41-202ENSMUST00000171342 Prex2Q3LAC4 1598 aa13.88□□□□□ -0.19
Rnf41-202ENSMUST00000171342 Arhgef11Q68FM7 1552 aa13.88□□□□□ -0.19
Rnf41-202ENSMUST00000171342 Eif4g3Q80XI3 1579 aaKnown RBP13.87□□□□□ -0.19
Rnf41-202ENSMUST00000171342 Trak1Q6PD31 939 aa13.87□□□□□ -0.19
Rnf41-202ENSMUST00000171342 Rgl3Q3UYI5 709 aa13.86□□□□□ -0.19
Rnf41-202ENSMUST00000171342 Gcc2Q8CHG3 1679 aa13.85□□□□□ -0.19
Rnf41-202ENSMUST00000171342 Dennd4bQ3U1Y4 1499 aa13.85□□□□□ -0.19
Rnf41-202ENSMUST00000171342 Arid3cA6PWV5 409 aa13.84□□□□□ -0.19
Rnf41-202ENSMUST00000171342 Arhgef12Q8R4H2 1543 aaKnown RBP13.84□□□□□ -0.19
Rnf41-202ENSMUST00000171342 Map3k4O08648 1597 aa13.84□□□□□ -0.19
Rnf41-202ENSMUST00000171342 Adcy10Q8C0T9 1614 aa13.84□□□□□ -0.19
Rnf41-202ENSMUST00000171342 Sart1Q9Z315 806 aaKnown RBP13.84□□□□□ -0.19
Rnf41-202ENSMUST00000171342 Il16O54824 1322 aa13.83□□□□□ -0.2
Rnf41-202ENSMUST00000171342 Map4P27546 1125 aaKnown RBP13.82□□□□□ -0.2
Rnf41-202ENSMUST00000171342 Kdm6bQ5NCY0 1641 aa13.82□□□□□ -0.2
Rnf41-202ENSMUST00000171342 Usp47Q8BY87 1376 aa13.82□□□□□ -0.2
Rnf41-202ENSMUST00000171342 Dnmt1P13864 1620 aaKnown RBP13.81□□□□□ -0.2
Rnf41-202ENSMUST00000171342 Gm13697A2AK42 830 aa13.81□□□□□ -0.2
Rnf41-202ENSMUST00000171342 Rfx7F8VPJ6 1459 aa13.81□□□□□ -0.2
Rnf41-202ENSMUST00000171342 Kiaa1551Q5DTW7 1521 aa13.8□□□□□ -0.2
Rnf41-202ENSMUST00000171342 Adgrb2Q8CGM1 1561 aa13.8□□□□□ -0.2
Rnf41-202ENSMUST00000171342 Mroh2aD3Z750 1679 aa13.79□□□□□ -0.2
Rnf41-202ENSMUST00000171342 Nup155Q99P88 1391 aaKnown RBP13.79□□□□□ -0.2
Rnf41-202ENSMUST00000171342 Ttll5Q8CHB8 1328 aa13.79□□□□□ -0.2
Rnf41-202ENSMUST00000171342 Fancd2Q80V62 1450 aa13.79□□□□□ -0.2
Rnf41-202ENSMUST00000171342 Mapkbp1Q6NS57 1503 aa13.78□□□□□ -0.2
Rnf41-202ENSMUST00000171342 Mlh3A0A1Y7VMP7 1443 aa13.78□□□□□ -0.2
Rnf41-202ENSMUST00000171342 Slc24a1Q91WD8 1130 aa13.77□□□□□ -0.21
Rnf41-202ENSMUST00000171342 Grwd1Q810D6 446 aaKnown RBP13.77□□□□□ -0.21
Rnf41-202ENSMUST00000171342 Arhgap5P97393 1501 aa13.77□□□□□ -0.21
Rnf41-202ENSMUST00000171342 Cdc42bpaQ3UU96 1719 aa13.76□□□□□ -0.21
Rnf41-202ENSMUST00000171342 Abcc1O35379 1528 aa13.76□□□□□ -0.21
Rnf41-202ENSMUST00000171342 Dhx9O70133 1380 aaKnown RBP13.76□□□□□ -0.21
Rnf41-202ENSMUST00000171342 Zbtb4Q5F293 982 aa13.75□□□□□ -0.21
Rnf41-202ENSMUST00000171342 DiexfQ8BTT6 772 aaKnown RBP13.75□□□□□ -0.21
Rnf41-202ENSMUST00000171342 Naip5Q9R016 1403 aa13.75□□□□□ -0.21
Rnf41-202ENSMUST00000171342 Clstn2Q9ER65 966 aa13.74□□□□□ -0.21
Rnf41-202ENSMUST00000171342 Kdm3bQ6ZPY7 1562 aa13.73□□□□□ -0.21
Rnf41-202ENSMUST00000171342 Trappc8E9PWG2 1437 aa13.73□□□□□ -0.21
Rnf41-202ENSMUST00000171342 Erich6D3Z6S9 713 aa13.73□□□□□ -0.21
Rnf41-202ENSMUST00000171342 Caskin1Q6P9K8 1431 aa13.72□□□□□ -0.21
Rnf41-202ENSMUST00000171342 SphkapQ6NSW3 1687 aa13.72□□□□□ -0.21
Rnf41-202ENSMUST00000171342 Pabpn1Q8CCS6 302 aaKnown RBP13.72□□□□□ -0.21
Rnf41-202ENSMUST00000171342 Ythdc2B2RR83 1445 aaKnown RBP13.71□□□□□ -0.22
Rnf41-202ENSMUST00000171342 Anks4bQ8K3X6 423 aa13.7□□□□□ -0.22
Rnf41-202ENSMUST00000171342 Atp10dQ8K2X1 1416 aa13.7□□□□□ -0.22
Rnf41-202ENSMUST00000171342 Rrbp1Q99PL5 1605 aaKnown RBP13.69□□□□□ -0.22
Rnf41-202ENSMUST00000171342 Zcchc11B2RX14 1644 aaKnown RBP13.69□□□□□ -0.22
Rnf41-202ENSMUST00000171342 Map3k5O35099 1380 aa13.69□□□□□ -0.22
Rnf41-202ENSMUST00000171342 AlkP97793 1621 aa13.67□□□□□ -0.22
Rnf41-202ENSMUST00000171342 Rprd2Q6NXI6 1469 aaKnown RBP13.66□□□□□ -0.22
Rnf41-202ENSMUST00000171342 Spag9Q58A65 1321 aaKnown RBP13.66□□□□□ -0.22
Rnf41-202ENSMUST00000171342 Rundc1Q0VDN7 615 aa13.65□□□□□ -0.22
Rnf41-202ENSMUST00000171342 Znf608Q56A10 1511 aa13.63□□□□□ -0.23
Rnf41-202ENSMUST00000171342 Card11Q8CIS0 1159 aa13.63□□□□□ -0.23
Rnf41-202ENSMUST00000171342 Igf1rQ60751 1373 aa13.63□□□□□ -0.23
Rnf41-202ENSMUST00000171342 Lemd3Q9WU40 921 aa13.63□□□□□ -0.23
Rnf41-202ENSMUST00000171342 Kif3bQ61771 747 aa13.61□□□□□ -0.23
Rnf41-202ENSMUST00000171342 Ssh2Q5SW75 1423 aa13.61□□□□□ -0.23
Rnf41-202ENSMUST00000171342 Fhod3Q76LL6 1578 aa13.61□□□□□ -0.23
Rnf41-202ENSMUST00000171342 Pde4cQ3UEI1 686 aa13.6□□□□□ -0.23
Rnf41-202ENSMUST00000171342 Pik3c2gO70167 1506 aa13.6□□□□□ -0.23
Rnf41-202ENSMUST00000171342 Stra8P70278 393 aa13.59□□□□□ -0.23
Rnf41-202ENSMUST00000171342 Os9Q8K2C7 672 aa13.59□□□□□ -0.23
Rnf41-202ENSMUST00000171342 Prdm16A2A935 1275 aa13.59□□□□□ -0.23
Rnf41-202ENSMUST00000171342 Cul7Q8VE73 1689 aa13.58□□□□□ -0.24
Rnf41-202ENSMUST00000171342 Mroh3A0A1D5RM54 893 aa13.58□□□□□ -0.24
Rnf41-202ENSMUST00000171342 Dapk1Q80YE7 1442 aa13.58□□□□□ -0.24
Rnf41-202ENSMUST00000171342 Cd109Q8R422 1442 aa13.58□□□□□ -0.24
Rnf41-202ENSMUST00000171342 Gapvd1Q6PAR5 1458 aa13.58□□□□□ -0.24
Rnf41-202ENSMUST00000171342 Fam208aQ69ZR9 1610 aaKnown RBP13.57□□□□□ -0.24
Rnf41-202ENSMUST00000171342 Csrnp3P59055 597 aa13.57□□□□□ -0.24
Rnf41-202ENSMUST00000171342 Ifit1bl1D3Z6F0 470 aa13.56□□□□□ -0.24
Rnf41-202ENSMUST00000171342 PtprtQ99M80 1454 aa13.56□□□□□ -0.24
Rnf41-202ENSMUST00000171342 Wdr7Q920I9 1489 aa13.55□□□□□ -0.24
Rnf41-202ENSMUST00000171342 Setbp1Q9Z180 1582 aa13.55□□□□□ -0.24
Rnf41-202ENSMUST00000171342 Kdm2aP59997 1161 aa13.55□□□□□ -0.24
Rnf41-202ENSMUST00000171342 Chd1P40201 1711 aa13.54□□□□□ -0.24
Rnf41-202ENSMUST00000171342 Mrs2Q5NCE8 434 aa13.54□□□□□ -0.24
Rnf41-202ENSMUST00000171342 Cwc22Q8C5N3 908 aaKnown RBP13.54□□□□□ -0.24
Rnf41-202ENSMUST00000171342 Camsap2Q8C1B1 1461 aa13.54□□□□□ -0.24
Rnf41-202ENSMUST00000171342 Wwc2Q6NXJ0 1187 aa13.54□□□□□ -0.24
Rnf41-202ENSMUST00000171342 Fmn2Q9JL04 1578 aa13.53□□□□□ -0.24
Rnf41-202ENSMUST00000171342 Stk24Q99KH8 431 aa13.53□□□□□ -0.24
Rnf41-202ENSMUST00000171342 Ttbk1Q6PCN3 1308 aa13.53□□□□□ -0.24
Rnf41-202ENSMUST00000171342 Adgrl2Q8JZZ7 1487 aa13.53□□□□□ -0.24
Rnf41-202ENSMUST00000171342 Lrrc9Q8CDN9 1456 aa13.52□□□□□ -0.24
Rnf41-202ENSMUST00000171342 Gm156Q58A37 223 aa13.52□□□□□ -0.24
Rnf41-202ENSMUST00000171342 NrdcQ8BHG1 1161 aa13.52□□□□□ -0.24
Rnf41-202ENSMUST00000171342 NhsB1AV60 1647 aa13.52□□□□□ -0.25
Rnf41-202ENSMUST00000171342 Supt6hQ62383 1726 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms