RNA–Protein interactions for RNA: ENSMUST00000118976.8

Ccdc9-202, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-202ENSMUST00000118976 Ccdc27Q3V036 639 aa34.86■■■■□ 3.17
Ccdc9-202ENSMUST00000118976 Dnajc5bQ9CQ94 199 aa34.86■■■■□ 3.17
Ccdc9-202ENSMUST00000118976 Usp47Q8BY87 1376 aa34.85■■■■□ 3.17
Ccdc9-202ENSMUST00000118976 Mug1P28665 1476 aa34.85■■■■□ 3.17
Ccdc9-202ENSMUST00000118976 Gcc2Q8CHG3 1679 aa34.84■■■■□ 3.17
Ccdc9-202ENSMUST00000118976 Disp1Q3TDN0 1521 aa34.83■■■■□ 3.17
Ccdc9-202ENSMUST00000118976 Kif21aQ9QXL2 1672 aa34.78■■■■□ 3.16
Ccdc9-202ENSMUST00000118976 EprsQ8CGC7 1512 aaKnown RBP34.77■■■■□ 3.16
Ccdc9-202ENSMUST00000118976 Samd9lQ69Z37 1561 aa34.77■■■■□ 3.16
Ccdc9-202ENSMUST00000118976 Pkd2O35245 966 aa34.77■■■■□ 3.16
Ccdc9-202ENSMUST00000118976 Ipo9Q91YE6 1041 aa34.75■■■■□ 3.15
Ccdc9-202ENSMUST00000118976 Upf2A2AT37 1269 aaKnown RBP34.74■■■■□ 3.15
Ccdc9-202ENSMUST00000118976 Mrc2Q64449 1479 aa34.74■■■■□ 3.15
Ccdc9-202ENSMUST00000118976 Gpatch8A2A6A1 1505 aa34.7■■■■□ 3.15
Ccdc9-202ENSMUST00000118976 Plekhg5Q66T02 1073 aa34.7■■■■□ 3.15
Ccdc9-202ENSMUST00000118976 Ift140E9PY46 1464 aa34.7■■■■□ 3.14
Ccdc9-202ENSMUST00000118976 NexmifQ5DTT1 1515 aa34.69■■■■□ 3.14
Ccdc9-202ENSMUST00000118976 Tcerg1Q8CGF7 1100 aaKnown RBP34.68■■■■□ 3.14
Ccdc9-202ENSMUST00000118976 Ofd1Q80Z25 1017 aa34.67■■■■□ 3.14
Ccdc9-202ENSMUST00000118976 Pik3c2gO70167 1506 aa34.66■■■■□ 3.14
Ccdc9-202ENSMUST00000118976 Slc4a3P16283 1227 aa34.66■■■■□ 3.14
Ccdc9-202ENSMUST00000118976 Kif27Q7M6Z4 1394 aa34.65■■■■□ 3.14
Ccdc9-202ENSMUST00000118976 Rad54l2Q99NG0 1466 aa34.64■■■■□ 3.14
Ccdc9-202ENSMUST00000118976 Cabp1Q9JLK7 227 aa34.63■■■■□ 3.13
Ccdc9-202ENSMUST00000118976 Cwc22Q8C5N3 908 aaKnown RBP34.62■■■■□ 3.13
Ccdc9-202ENSMUST00000118976 Abca5Q8K448 1642 aa34.61■■■■□ 3.13
Ccdc9-202ENSMUST00000118976 L3mbtl2P59178 703 aa34.59■■■■□ 3.13
Ccdc9-202ENSMUST00000118976 BC005561E9Q5E2 1589 aa34.59■■■■□ 3.13
Ccdc9-202ENSMUST00000118976 Ccdc9Q8VC31 543 aaKnown RBP34.58■■■■□ 3.13
Ccdc9-202ENSMUST00000118976 Hdac5Q9Z2V6 1113 aa34.58■■■■□ 3.13
Ccdc9-202ENSMUST00000118976 Zfp644E9QA22 1323 aa34.57■■■■□ 3.12
Ccdc9-202ENSMUST00000118976 Lamc1P02468 1607 aaKnown RBP34.56■■■■□ 3.12
Ccdc9-202ENSMUST00000118976 CadpsQ80TJ1 1355 aa34.55■■■■□ 3.12
Ccdc9-202ENSMUST00000118976 Abcc5Q9R1X5 1436 aa34.54■■■■□ 3.12
Ccdc9-202ENSMUST00000118976 Arhgef12Q8R4H2 1543 aaKnown RBP34.49■■■■□ 3.11
Ccdc9-202ENSMUST00000118976 Mbd5B1AYB6 1498 aa34.48■■■■□ 3.11
Ccdc9-202ENSMUST00000118976 Kcnh8P59111 1102 aa34.48■■■■□ 3.11
Ccdc9-202ENSMUST00000118976 Myom3A2ABU4 1439 aa34.48■■■■□ 3.11
Ccdc9-202ENSMUST00000118976 Plekhh2Q8C115 1491 aa34.47■■■■□ 3.11
Ccdc9-202ENSMUST00000118976 Kif21bQ9QXL1 1668 aa34.47■■■■□ 3.11
Ccdc9-202ENSMUST00000118976 Dapk1Q80YE7 1442 aa34.45■■■■□ 3.11
Ccdc9-202ENSMUST00000118976 Mink1Q9JM52 1308 aa34.45■■■■□ 3.11
Ccdc9-202ENSMUST00000118976 Ttbk1Q6PCN3 1308 aa34.44■■■■□ 3.1
Ccdc9-202ENSMUST00000118976 Arhgap27A2AB59 869 aa34.44■■■■□ 3.1
Ccdc9-202ENSMUST00000118976 Pla2r1Q62028 1487 aa34.44■■■■□ 3.1
Ccdc9-202ENSMUST00000118976 Naip6Q9JIB6 1403 aa34.41■■■■□ 3.1
Ccdc9-202ENSMUST00000118976 Hsp90aa1P07901 733 aaKnown RBP34.39■■■■□ 3.1
Ccdc9-202ENSMUST00000118976 Kank1E9Q238 1360 aa34.38■■■■□ 3.09
Ccdc9-202ENSMUST00000118976 Rundc1Q0VDN7 615 aa34.34■■■■□ 3.09
Ccdc9-202ENSMUST00000118976 SphkapQ6NSW3 1687 aa34.34■■■■□ 3.09
Ccdc9-202ENSMUST00000118976 Mug2P28666 1451 aa34.32■■■■□ 3.08
Ccdc9-202ENSMUST00000118976 Arhgef40Q3UPH7 1517 aa34.31■■■■□ 3.08
Ccdc9-202ENSMUST00000118976 Kif14L0N7N1 1674 aaKnown RBP34.31■■■■□ 3.08
Ccdc9-202ENSMUST00000118976 Il16O54824 1322 aa34.3■■■■□ 3.08
Ccdc9-202ENSMUST00000118976 Kdm3bQ6ZPY7 1562 aa34.29■■■■□ 3.08
Ccdc9-202ENSMUST00000118976 AlkP97793 1621 aa34.29■■■■□ 3.08
Ccdc9-202ENSMUST00000118976 Erbb3Q61526 1339 aa34.28■■■■□ 3.08
Ccdc9-202ENSMUST00000118976 Mtus2Q3UHD3 1353 aa34.27■■■■□ 3.08
Ccdc9-202ENSMUST00000118976 Map3k4O08648 1597 aa34.27■■■■□ 3.08
Ccdc9-202ENSMUST00000118976 Rgl3Q3UYI5 709 aa34.26■■■■□ 3.08
Ccdc9-202ENSMUST00000118976 Card11Q8CIS0 1159 aa34.25■■■■□ 3.07
Ccdc9-202ENSMUST00000118976 Iqcf3Q9D498 203 aa34.25■■■■□ 3.07
Ccdc9-202ENSMUST00000118976 Dhx9O70133 1380 aaKnown RBP34.25■■■■□ 3.07
Ccdc9-202ENSMUST00000118976 Kdm6bQ5NCY0 1641 aa34.25■■■■□ 3.07
Ccdc9-202ENSMUST00000118976 Soga1E1U8D0 1418 aa34.24■■■■□ 3.07
Ccdc9-202ENSMUST00000118976 Magi3Q9EQJ9 1476 aa34.23■■■■□ 3.07
Ccdc9-202ENSMUST00000118976 Ncoa3O09000 1398 aa34.22■■■■□ 3.07
Ccdc9-202ENSMUST00000118976 Gtf3c3Q3TMP1 882 aa34.22■■■■□ 3.07
Ccdc9-202ENSMUST00000118976 Rock2P70336 1388 aa34.21■■■■□ 3.07
Ccdc9-202ENSMUST00000118976 Dhx57Q6P5D3 1388 aaKnown RBP34.2■■■■□ 3.07
Ccdc9-202ENSMUST00000118976 Adamts12Q811B3 1600 aa34.19■■■■□ 3.06
Ccdc9-202ENSMUST00000118976 Prkrip1Q9CWV6 186 aaKnown RBP34.19■■■■□ 3.06
Ccdc9-202ENSMUST00000118976 WizO88286 1684 aaKnown RBP34.18■■■■□ 3.06
Ccdc9-202ENSMUST00000118976 Plb1Q3TTY0 1478 aa34.16■■■■□ 3.06
Ccdc9-202ENSMUST00000118976 Adgrb2Q8CGM1 1561 aa34.16■■■■□ 3.06
Ccdc9-202ENSMUST00000118976 DroshaQ5HZJ0 1373 aaKnown RBP34.16■■■■□ 3.06
Ccdc9-202ENSMUST00000118976 TnikP83510 1323 aa34.16■■■■□ 3.06
Ccdc9-202ENSMUST00000118976 Irx3P81067 507 aa34.15■■■■□ 3.06
Ccdc9-202ENSMUST00000118976 RalgapbQ8BQZ4 1484 aa34.11■■■■□ 3.05
Ccdc9-202ENSMUST00000118976 NeflP08551 543 aa34.1■■■■□ 3.05
Ccdc9-202ENSMUST00000118976 Adcy10Q8C0T9 1614 aa34.1■■■■□ 3.05
Ccdc9-202ENSMUST00000118976 Ttll5Q8CHB8 1328 aa34.09■■■■□ 3.05
Ccdc9-202ENSMUST00000118976 Grin2aP35436 1464 aa34.09■■■■□ 3.05
Ccdc9-202ENSMUST00000118976 Zfp444Q3TDV8 331 aaKnown RBP34.09■■■■□ 3.05
Ccdc9-202ENSMUST00000118976 Supt6hQ62383 1726 aaKnown RBP34.08■■■■□ 3.05
Ccdc9-202ENSMUST00000118976 Wdr7Q920I9 1489 aa34.07■■■■□ 3.04
Ccdc9-202ENSMUST00000118976 Cdk13Q69ZA1 1511 aaKnown RBP34.06■■■■□ 3.04
Ccdc9-202ENSMUST00000118976 Rpgrip1lQ8CG73 1264 aa34.06■■■■□ 3.04
Ccdc9-202ENSMUST00000118976 Rapgef6Q5NCJ1 1609 aa34.05■■■■□ 3.04
Ccdc9-202ENSMUST00000118976 ChgaP26339 463 aaKnown RBP34.05■■■■□ 3.04
Ccdc9-202ENSMUST00000118976 Mak16Q8BGS0 296 aaKnown RBP34.04■■■■□ 3.04
Ccdc9-202ENSMUST00000118976 Cpsf1Q9EPU4 1441 aaKnown RBP34.03■■■■□ 3.04
Ccdc9-202ENSMUST00000118976 Zscan21Q07231 555 aa34.03■■■■□ 3.04
Ccdc9-202ENSMUST00000118976 Trak1Q6PD31 939 aa34.01■■■■□ 3.04
Ccdc9-202ENSMUST00000118976 Anp32bQ9EST5 272 aaKnown RBP34.01■■■■□ 3.03
Ccdc9-202ENSMUST00000118976 WrnO09053 1401 aa34■■■■□ 3.03
Ccdc9-202ENSMUST00000118976 Cdc42bpaQ3UU96 1719 aa33.99■■■■□ 3.03
Ccdc9-202ENSMUST00000118976 PxdnQ3UQ28 1475 aa33.98■■■■□ 3.03
Ccdc9-202ENSMUST00000118976 Trpm2Q91YD4 1506 aa33.96■■■■□ 3.03
Ccdc9-202ENSMUST00000118976 Arhgef11Q68FM7 1552 aa33.95■■■■□ 3.03
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms