RNA–Protein interactions for RNA: ENSMUST00000117721.7

Zkscan3-204, Transcript of Zinc finger protein with KRAB and SCAN domains 3, mousemouse

TSL 1 (best) BASIC

Gene Zkscan3, Length 5,788 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Zkscan3-204ENSMUST00000117721 Trak1Q6PD31 939 aa20.59■□□□□ 0.89
Zkscan3-204ENSMUST00000117721 Lemd3Q9WU40 921 aa20.58■□□□□ 0.89
Zkscan3-204ENSMUST00000117721 Cabp1Q9JLK7 227 aa20.58■□□□□ 0.88
Zkscan3-204ENSMUST00000117721 HnrnpuQ8VEK3 800 aaKnown RBP20.57■□□□□ 0.88
Zkscan3-204ENSMUST00000117721 Stk26Q99JT2 416 aa20.57■□□□□ 0.88
Zkscan3-204ENSMUST00000117721 Rtf1A2AQ19 715 aaKnown RBP20.56■□□□□ 0.88
Zkscan3-204ENSMUST00000117721 PnnO35691 725 aaKnown RBP20.56■□□□□ 0.88
Zkscan3-204ENSMUST00000117721 Dhx57Q6P5D3 1388 aaKnown RBP20.56■□□□□ 0.88
Zkscan3-204ENSMUST00000117721 Speer4f1Q9D5Q6 258 aa20.55■□□□□ 0.88
Zkscan3-204ENSMUST00000117721 Cux2P70298 1426 aa20.54■□□□□ 0.88
Zkscan3-204ENSMUST00000117721 MccE9PWI3 1003 aa20.53■□□□□ 0.88
Zkscan3-204ENSMUST00000117721 Exoc6Q8R313 802 aa20.52■□□□□ 0.88
Zkscan3-204ENSMUST00000117721 Casc1Q6TDU8 730 aa20.52■□□□□ 0.87
Zkscan3-204ENSMUST00000117721 Clstn1Q9EPL2 979 aa20.5■□□□□ 0.87
Zkscan3-204ENSMUST00000117721 Sin3aQ60520 1274 aaKnown RBP20.49■□□□□ 0.87
Zkscan3-204ENSMUST00000117721 U2surpQ6NV83 1029 aaKnown RBP20.49■□□□□ 0.87
Zkscan3-204ENSMUST00000117721 Nup155Q99P88 1391 aaKnown RBP20.48■□□□□ 0.87
Zkscan3-204ENSMUST00000117721 Zscan21Q07231 555 aa20.48■□□□□ 0.87
Zkscan3-204ENSMUST00000117721 Rock2P70336 1388 aa20.48■□□□□ 0.87
Zkscan3-204ENSMUST00000117721 CftrP26361 1476 aa20.48■□□□□ 0.87
Zkscan3-204ENSMUST00000117721 Psme1P97371 249 aa20.47■□□□□ 0.87
Zkscan3-204ENSMUST00000117721 Plekhh2Q8C115 1491 aa20.47■□□□□ 0.87
Zkscan3-204ENSMUST00000117721 Crybg2B7ZCC2 1516 aa20.46■□□□□ 0.87
Zkscan3-204ENSMUST00000117721 Sh3bp5Q9Z131 463 aa20.46■□□□□ 0.87
Zkscan3-204ENSMUST00000117721 U2af1Q9D883 239 aaKnown RBP20.46■□□□□ 0.87
Zkscan3-204ENSMUST00000117721 Eif4g2Q62448 906 aaKnown RBP20.45■□□□□ 0.86
Zkscan3-204ENSMUST00000117721 Tcerg1Q8CGF7 1100 aaKnown RBP20.44■□□□□ 0.86
Zkscan3-204ENSMUST00000117721 SafbD3YXK2 937 aaKnown RBP20.44■□□□□ 0.86
Zkscan3-204ENSMUST00000117721 Mak16Q8BGS0 296 aaKnown RBP20.44■□□□□ 0.86
Zkscan3-204ENSMUST00000117721 Sart3Q9JLI8 962 aaKnown RBP20.44■□□□□ 0.86
Zkscan3-204ENSMUST00000117721 Carmil1Q6EDY6 1374 aa20.44■□□□□ 0.86
Zkscan3-204ENSMUST00000117721 Dcaf11Q91VU6 549 aa20.44■□□□□ 0.86
Zkscan3-204ENSMUST00000117721 Slc4a3P16283 1227 aa20.43■□□□□ 0.86
Zkscan3-204ENSMUST00000117721 Plin1Q8CGN5 517 aa20.43■□□□□ 0.86
Zkscan3-204ENSMUST00000117721 Golga2Q921M4 999 aa20.43■□□□□ 0.86
Zkscan3-204ENSMUST00000117721 Supt16hQ920B9 1047 aa20.41■□□□□ 0.86
Zkscan3-204ENSMUST00000117721 Phldb1Q6PDH0 1371 aaKnown RBP20.4■□□□□ 0.86
Zkscan3-204ENSMUST00000117721 Birc3O08863 600 aa20.4■□□□□ 0.86
Zkscan3-204ENSMUST00000117721 Kif3bQ61771 747 aa20.4■□□□□ 0.86
Zkscan3-204ENSMUST00000117721 Chmp5Q9D7S9 219 aa20.39■□□□□ 0.86
Zkscan3-204ENSMUST00000117721 Txndc2Q6P902 515 aa20.39■□□□□ 0.85
Zkscan3-204ENSMUST00000117721 Spryd3E9Q9B3 442 aa20.37■□□□□ 0.85
Zkscan3-204ENSMUST00000117721 Srcin1Q9QWI6 1250 aa20.37■□□□□ 0.85
Zkscan3-204ENSMUST00000117721 EspnQ9ET47 871 aa20.37■□□□□ 0.85
Zkscan3-204ENSMUST00000117721 Tmco5bQ80X59 307 aa20.36■□□□□ 0.85
Zkscan3-204ENSMUST00000117721 Q3TQI7 289 aaKnown RBP20.36■□□□□ 0.85
Zkscan3-204ENSMUST00000117721 Pde3bQ61409 1100 aa20.35■□□□□ 0.85
Zkscan3-204ENSMUST00000117721 Synj1Q8CHC4 1574 aa20.35■□□□□ 0.85
Zkscan3-204ENSMUST00000117721 Rassf8Q8CJ96 419 aa20.34■□□□□ 0.85
Zkscan3-204ENSMUST00000117721 Adam1bQ8R534 806 aa20.34■□□□□ 0.85
Zkscan3-204ENSMUST00000117721 Rsph4aQ8BYM7 716 aa20.34■□□□□ 0.85
Zkscan3-204ENSMUST00000117721 Rapgef2Q8CHG7 1496 aa20.34■□□□□ 0.85
Zkscan3-204ENSMUST00000117721 Cecr2E9Q2Z1 1453 aa20.33■□□□□ 0.84
Zkscan3-204ENSMUST00000117721 Spag9Q58A65 1321 aaKnown RBP20.32■□□□□ 0.84
Zkscan3-204ENSMUST00000117721 Sox12Q04890 314 aa20.32■□□□□ 0.84
Zkscan3-204ENSMUST00000117721 PtmsQ9D0J8 101 aaKnown RBP20.32■□□□□ 0.84
Zkscan3-204ENSMUST00000117721 Ccnb3Q810T2 1396 aa20.32■□□□□ 0.84
Zkscan3-204ENSMUST00000117721 Stard8Q8K031 1019 aa20.31■□□□□ 0.84
Zkscan3-204ENSMUST00000117721 Ecm2Q5FW85 670 aa20.31■□□□□ 0.84
Zkscan3-204ENSMUST00000117721 Ggt6Q6PDE7 497 aa20.3■□□□□ 0.84
Zkscan3-204ENSMUST00000117721 Tnnt1O88346 262 aa20.3■□□□□ 0.84
Zkscan3-204ENSMUST00000117721 UacaQ8CGB3 1411 aa20.3■□□□□ 0.84
Zkscan3-204ENSMUST00000117721 Nol10Q5RJG1 687 aaKnown RBP20.29■□□□□ 0.84
Zkscan3-204ENSMUST00000117721 Smarca2Q6DIC0 1577 aa20.29■□□□□ 0.84
Zkscan3-204ENSMUST00000117721 Znf316Q6PGE4 1016 aa20.29■□□□□ 0.84
Zkscan3-204ENSMUST00000117721 Dnai1Q8C0M8 701 aa20.29■□□□□ 0.84
Zkscan3-204ENSMUST00000117721 Atad2bE9Q166 1460 aaKnown RBP20.28■□□□□ 0.84
Zkscan3-204ENSMUST00000117721 CenpjQ569L8 1344 aa20.28■□□□□ 0.84
Zkscan3-204ENSMUST00000117721 Sart1Q9Z315 806 aaKnown RBP20.27■□□□□ 0.84
Zkscan3-204ENSMUST00000117721 HdgfP51859 237 aaKnown RBP20.26■□□□□ 0.83
Zkscan3-204ENSMUST00000117721 Smarca4Q3TKT4 1613 aaKnown RBP20.26■□□□□ 0.83
Zkscan3-204ENSMUST00000117721 Znf330Q922H9 316 aa20.26■□□□□ 0.83
Zkscan3-204ENSMUST00000117721 Slc4a1apE9PX68 744 aa20.25■□□□□ 0.83
Zkscan3-204ENSMUST00000117721 CrbnQ8C7D2 445 aa20.25■□□□□ 0.83
Zkscan3-204ENSMUST00000117721 Cluap1Q8R3P7 413 aa20.25■□□□□ 0.83
Zkscan3-204ENSMUST00000117721 Anapc15P60007 132 aa20.24■□□□□ 0.83
Zkscan3-204ENSMUST00000117721 Ccar1Q8CH18 1146 aaKnown RBP20.24■□□□□ 0.83
Zkscan3-204ENSMUST00000117721 Fan1Q69ZT1 1020 aa20.23■□□□□ 0.83
Zkscan3-204ENSMUST00000117721 Ipo8Q7TMY7 1010 aa20.22■□□□□ 0.83
Zkscan3-204ENSMUST00000117721 Gm973E9Q295 1059 aa20.22■□□□□ 0.83
Zkscan3-204ENSMUST00000117721 Ksr2Q3UVC0 959 aa20.21■□□□□ 0.83
Zkscan3-204ENSMUST00000117721 MlecQ6ZQI3 291 aaKnown RBP20.21■□□□□ 0.83
Zkscan3-204ENSMUST00000117721 Pcmtd1P59913 357 aa20.21■□□□□ 0.83
Zkscan3-204ENSMUST00000117721 LrpprcQ6PB66 1392 aaKnown RBP20.21■□□□□ 0.83
Zkscan3-204ENSMUST00000117721 Cttnbp2B9EJA2 1648 aa20.19■□□□□ 0.82
Zkscan3-204ENSMUST00000117721 MecomP14404 1042 aa20.19■□□□□ 0.82
Zkscan3-204ENSMUST00000117721 Mfap1aC0HKD8 439 aaKnown RBP20.19■□□□□ 0.82
Zkscan3-204ENSMUST00000117721 Mfap1bC0HKD9 439 aaKnown RBP20.19■□□□□ 0.82
Zkscan3-204ENSMUST00000117721 Iffo2Q8R2V2 512 aa20.19■□□□□ 0.82
Zkscan3-204ENSMUST00000117721 Usp47Q8BY87 1376 aa20.18■□□□□ 0.82
Zkscan3-204ENSMUST00000117721 Erich6bQ9D4S6 220 aa20.18■□□□□ 0.82
Zkscan3-204ENSMUST00000117721 Ipo9Q91YE6 1041 aa20.17■□□□□ 0.82
Zkscan3-204ENSMUST00000117721 Utp14aQ640M1 767 aaKnown RBP20.16■□□□□ 0.82
Zkscan3-204ENSMUST00000117721 Q8BT18 775 aa20.16■□□□□ 0.82
Zkscan3-204ENSMUST00000117721 Dnttip2Q8R2M2 758 aaKnown RBP20.16■□□□□ 0.82
Zkscan3-204ENSMUST00000117721 Pank3Q8R2W9 370 aa20.14■□□□□ 0.81
Zkscan3-204ENSMUST00000117721 Ap3b2Q9JME5 1082 aa20.14■□□□□ 0.81
Zkscan3-204ENSMUST00000117721 Senp3Q9EP97 568 aaKnown RBP20.13■□□□□ 0.81
Zkscan3-204ENSMUST00000117721 Smarce1O54941 411 aaKnown RBP20.12■□□□□ 0.81
Zkscan3-204ENSMUST00000117721 Tsen2Q6P7W5 460 aa20.12■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms