RNA–Protein interactions for RNA: ENSMUST00000111042.2

Bdnf-202, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 3,905 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-202ENSMUST00000111042 Tdrd9Q14BI7 1383 aa11.33□□□□□ -0.6
Bdnf-202ENSMUST00000111042 TchhA0A0B4J1F9 1599 aa11.33□□□□□ -0.6
Bdnf-202ENSMUST00000111042 Erich3F6QRE9 1637 aa11.33□□□□□ -0.6
Bdnf-202ENSMUST00000111042 Nup155Q99P88 1391 aaKnown RBP11.32□□□□□ -0.6
Bdnf-202ENSMUST00000111042 Hdac5Q9Z2V6 1113 aa11.31□□□□□ -0.6
Bdnf-202ENSMUST00000111042 Jph4Q80WT0 628 aa11.31□□□□□ -0.6
Bdnf-202ENSMUST00000111042 Gpatch8A2A6A1 1505 aa11.31□□□□□ -0.6
Bdnf-202ENSMUST00000111042 Exoc6Q8R313 802 aa11.3□□□□□ -0.6
Bdnf-202ENSMUST00000111042 NexmifQ5DTT1 1515 aa11.3□□□□□ -0.6
Bdnf-202ENSMUST00000111042 Arhgap31A6X8Z5 1425 aa11.3□□□□□ -0.6
Bdnf-202ENSMUST00000111042 Ppp4r2Q0VGB7 417 aa11.3□□□□□ -0.6
Bdnf-202ENSMUST00000111042 Ift140E9PY46 1464 aa11.3□□□□□ -0.6
Bdnf-202ENSMUST00000111042 Mroh3A0A1D5RM54 893 aa11.29□□□□□ -0.6
Bdnf-202ENSMUST00000111042 Smg6P61406 1418 aaKnown RBP11.29□□□□□ -0.6
Bdnf-202ENSMUST00000111042 Kdm2aP59997 1161 aa11.29□□□□□ -0.6
Bdnf-202ENSMUST00000111042 Pla2r1Q62028 1487 aa11.28□□□□□ -0.6
Bdnf-202ENSMUST00000111042 Rad21Q61550 635 aaKnown RBP11.28□□□□□ -0.6
Bdnf-202ENSMUST00000111042 Sart1Q9Z315 806 aaKnown RBP11.27□□□□□ -0.6
Bdnf-202ENSMUST00000111042 Ofd1Q80Z25 1017 aa11.27□□□□□ -0.61
Bdnf-202ENSMUST00000111042 Mug1P28665 1476 aa11.27□□□□□ -0.61
Bdnf-202ENSMUST00000111042 Ncoa2Q61026 1462 aa11.26□□□□□ -0.61
Bdnf-202ENSMUST00000111042 Myt1Q8CFC2 1127 aa11.26□□□□□ -0.61
Bdnf-202ENSMUST00000111042 Soga1E1U8D0 1418 aa11.26□□□□□ -0.61
Bdnf-202ENSMUST00000111042 Nlrp6Q91WS2 869 aa11.25□□□□□ -0.61
Bdnf-202ENSMUST00000111042 Lmo7E9PYF4 1699 aaKnown RBP11.25□□□□□ -0.61
Bdnf-202ENSMUST00000111042 Disp1Q3TDN0 1521 aa11.25□□□□□ -0.61
Bdnf-202ENSMUST00000111042 Kif21aQ9QXL2 1672 aa11.24□□□□□ -0.61
Bdnf-202ENSMUST00000111042 Arid3cA6PWV5 409 aa11.24□□□□□ -0.61
Bdnf-202ENSMUST00000111042 Wdr43Q6ZQL4 677 aaKnown RBP11.24□□□□□ -0.61
Bdnf-202ENSMUST00000111042 Gm13695A2AK44 830 aa11.24□□□□□ -0.61
Bdnf-202ENSMUST00000111042 Abcc5Q9R1X5 1436 aa11.24□□□□□ -0.61
Bdnf-202ENSMUST00000111042 Atp1b4Q99ME6 356 aa11.24□□□□□ -0.61
Bdnf-202ENSMUST00000111042 Fam71e1A1L3C1 212 aa11.23□□□□□ -0.61
Bdnf-202ENSMUST00000111042 Ifit1bl1D3Z6F0 470 aa11.23□□□□□ -0.61
Bdnf-202ENSMUST00000111042 PxdnQ3UQ28 1475 aa11.23□□□□□ -0.61
Bdnf-202ENSMUST00000111042 WizO88286 1684 aaKnown RBP11.22□□□□□ -0.61
Bdnf-202ENSMUST00000111042 BC005561E9Q5E2 1589 aa11.22□□□□□ -0.61
Bdnf-202ENSMUST00000111042 Kdm5bQ80Y84 1544 aa11.21□□□□□ -0.62
Bdnf-202ENSMUST00000111042 Fam163aQ8CAA5 168 aa11.21□□□□□ -0.62
Bdnf-202ENSMUST00000111042 Ttll5Q8CHB8 1328 aa11.21□□□□□ -0.62
Bdnf-202ENSMUST00000111042 Znf710Q3U288 666 aa11.2□□□□□ -0.62
Bdnf-202ENSMUST00000111042 Dhx9O70133 1380 aaKnown RBP11.2□□□□□ -0.62
Bdnf-202ENSMUST00000111042 Dapk1Q80YE7 1442 aa11.2□□□□□ -0.62
Bdnf-202ENSMUST00000111042 Stk24Q99KH8 431 aa11.2□□□□□ -0.62
Bdnf-202ENSMUST00000111042 Ncoa3O09000 1398 aa11.2□□□□□ -0.62
Bdnf-202ENSMUST00000111042 Magi3Q9EQJ9 1476 aa11.2□□□□□ -0.62
Bdnf-202ENSMUST00000111042 Peg3Q3URU2 1571 aa11.19□□□□□ -0.62
Bdnf-202ENSMUST00000111042 Gm20521D3Z5F7 333 aa11.18□□□□□ -0.62
Bdnf-202ENSMUST00000111042 Naip5Q9R016 1403 aa11.18□□□□□ -0.62
Bdnf-202ENSMUST00000111042 Il16O54824 1322 aa11.18□□□□□ -0.62
Bdnf-202ENSMUST00000111042 Ccdc141E9Q8Q6 1531 aa11.18□□□□□ -0.62
Bdnf-202ENSMUST00000111042 Magi1Q6RHR9 1471 aa11.16□□□□□ -0.62
Bdnf-202ENSMUST00000111042 Srpk2O54781 681 aaKnown RBP11.15□□□□□ -0.62
Bdnf-202ENSMUST00000111042 Rfx7F8VPJ6 1459 aa11.15□□□□□ -0.62
Bdnf-202ENSMUST00000111042 Kif3bQ61771 747 aa11.14□□□□□ -0.63
Bdnf-202ENSMUST00000111042 Fgd6Q69ZL1 1399 aa11.14□□□□□ -0.63
Bdnf-202ENSMUST00000111042 Spag9Q58A65 1321 aaKnown RBP11.14□□□□□ -0.63
Bdnf-202ENSMUST00000111042 Neo1P97798 1493 aa11.14□□□□□ -0.63
Bdnf-202ENSMUST00000111042 Upf2A2AT37 1269 aaKnown RBP11.14□□□□□ -0.63
Bdnf-202ENSMUST00000111042 Lemd3Q9WU40 921 aa11.14□□□□□ -0.63
Bdnf-202ENSMUST00000111042 Lmtk2Q3TYD6 1471 aa11.13□□□□□ -0.63
Bdnf-202ENSMUST00000111042 Rtl5Q5DTT4 599 aa11.13□□□□□ -0.63
Bdnf-202ENSMUST00000111042 Polr3glQ8R0C0 218 aa11.11□□□□□ -0.63
Bdnf-202ENSMUST00000111042 Rock2P70336 1388 aa11.11□□□□□ -0.63
Bdnf-202ENSMUST00000111042 Slc4a2P13808 1237 aaKnown RBP11.11□□□□□ -0.63
Bdnf-202ENSMUST00000111042 Rapgef6Q5NCJ1 1609 aa11.1□□□□□ -0.63
Bdnf-202ENSMUST00000111042 Shroom2A2ALU4 1481 aa11.1□□□□□ -0.63
Bdnf-202ENSMUST00000111042 Arhgap5P97393 1501 aa11.1□□□□□ -0.63
Bdnf-202ENSMUST00000111042 Abca5Q8K448 1642 aa11.1□□□□□ -0.63
Bdnf-202ENSMUST00000111042 Zscan21Q07231 555 aa11.1□□□□□ -0.63
Bdnf-202ENSMUST00000111042 Ttbk1Q6PCN3 1308 aa11.09□□□□□ -0.63
Bdnf-202ENSMUST00000111042 Rprd2Q6NXI6 1469 aaKnown RBP11.09□□□□□ -0.63
Bdnf-202ENSMUST00000111042 Srcin1Q9QWI6 1250 aa11.09□□□□□ -0.63
Bdnf-202ENSMUST00000111042 Nup160Q9Z0W3 1402 aaKnown RBP11.09□□□□□ -0.63
Bdnf-202ENSMUST00000111042 Map3k5O35099 1380 aa11.08□□□□□ -0.63
Bdnf-202ENSMUST00000111042 Slc4a3P16283 1227 aa11.08□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Pde4cQ3UEI1 686 aa11.08□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Gm14025A2AP89 1413 aa11.08□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Arhgef40Q3UPH7 1517 aa11.08□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Cnga1P29974 684 aa11.08□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Pank3Q8R2W9 370 aa11.07□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Cd109Q8R422 1442 aa11.06□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Tmf1B9EKI3 1091 aa11.06□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Myom3A2ABU4 1439 aa11.06□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Slc4a1apE9PX68 744 aa11.06□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Gtf2e1Q9D0D5 440 aa11.06□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Plppr3Q7TPB0 716 aa11.05□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Inpp5dQ9ES52 1191 aa11.05□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Adamts12Q811B3 1600 aa11.05□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Mlh3A0A1Y7VMP7 1443 aa11.05□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Neurod2Q62414 383 aa11.05□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Mak16Q8BGS0 296 aaKnown RBP11.05□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Nolc1E9Q5C9 702 aaKnown RBP11.05□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Ncoa1P70365 1447 aa11.04□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Prdm16A2A935 1275 aa11.04□□□□□ -0.64
Bdnf-202ENSMUST00000111042 PnisrA2AJT4 805 aaKnown RBP11.04□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Stag3O70576 1240 aa11.04□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Apbb1Q9QXJ1 710 aa11.04□□□□□ -0.64
Bdnf-202ENSMUST00000111042 Prex2Q3LAC4 1598 aa11.04□□□□□ -0.64
Bdnf-202ENSMUST00000111042 IqubQ8CDK3 788 aa11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms