RNA–Protein interactions for RNA: ENSMUST00000107934.1

Shank1-201, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-201ENSMUST00000107934 Baz1bQ9Z277 1479 aa20.05■□□□□ 0.8
Shank1-201ENSMUST00000107934 Rwdd1Q9CQK7 243 aa20.04■□□□□ 0.8
Shank1-201ENSMUST00000107934 Tmf1B9EKI3 1091 aa20.04■□□□□ 0.8
Shank1-201ENSMUST00000107934 Trak1Q6PD31 939 aa20.04■□□□□ 0.8
Shank1-201ENSMUST00000107934 Arhgap35Q91YM2 1499 aa20.03■□□□□ 0.8
Shank1-201ENSMUST00000107934 Speer4f1Q9D5Q6 258 aa20.02■□□□□ 0.8
Shank1-201ENSMUST00000107934 Sox12Q04890 314 aa20.01■□□□□ 0.79
Shank1-201ENSMUST00000107934 KnstrnQ9D9Z1 312 aaKnown RBP20.01■□□□□ 0.79
Shank1-201ENSMUST00000107934 Cabp1Q9JLK7 227 aa20■□□□□ 0.79
Shank1-201ENSMUST00000107934 MlecQ6ZQI3 291 aaKnown RBP20■□□□□ 0.79
Shank1-201ENSMUST00000107934 Mphosph9A6H5Y1 991 aa19.99■□□□□ 0.79
Shank1-201ENSMUST00000107934 Txndc2Q6P902 515 aa19.99■□□□□ 0.79
Shank1-201ENSMUST00000107934 MccE9PWI3 1003 aa19.98■□□□□ 0.79
Shank1-201ENSMUST00000107934 Mbd3Q9Z2D8 285 aaKnown RBP19.98■□□□□ 0.79
Shank1-201ENSMUST00000107934 HnrnpuQ8VEK3 800 aaKnown RBP19.97■□□□□ 0.79
Shank1-201ENSMUST00000107934 Eif4g2Q62448 906 aaKnown RBP19.97■□□□□ 0.79
Shank1-201ENSMUST00000107934 Casc1Q6TDU8 730 aa19.97■□□□□ 0.79
Shank1-201ENSMUST00000107934 Birc3O08863 600 aa19.97■□□□□ 0.79
Shank1-201ENSMUST00000107934 Cux2P70298 1426 aa19.97■□□□□ 0.79
Shank1-201ENSMUST00000107934 Q8BT18 775 aa19.96■□□□□ 0.79
Shank1-201ENSMUST00000107934 Tnnt1O88346 262 aa19.95■□□□□ 0.78
Shank1-201ENSMUST00000107934 U2af1Q9D883 239 aaKnown RBP19.94■□□□□ 0.78
Shank1-201ENSMUST00000107934 Sin3aQ60520 1274 aaKnown RBP19.94■□□□□ 0.78
Shank1-201ENSMUST00000107934 Znf316Q6PGE4 1016 aa19.94■□□□□ 0.78
Shank1-201ENSMUST00000107934 Rock2P70336 1388 aa19.93■□□□□ 0.78
Shank1-201ENSMUST00000107934 Exoc6Q8R313 802 aa19.93■□□□□ 0.78
Shank1-201ENSMUST00000107934 CntlnA2AM05 1397 aa19.93■□□□□ 0.78
Shank1-201ENSMUST00000107934 Slc4a3P16283 1227 aa19.93■□□□□ 0.78
Shank1-201ENSMUST00000107934 Spryd3E9Q9B3 442 aa19.93■□□□□ 0.78
Shank1-201ENSMUST00000107934 Dcaf11Q91VU6 549 aa19.92■□□□□ 0.78
Shank1-201ENSMUST00000107934 Dhx57Q6P5D3 1388 aaKnown RBP19.92■□□□□ 0.78
Shank1-201ENSMUST00000107934 Nup155Q99P88 1391 aaKnown RBP19.92■□□□□ 0.78
Shank1-201ENSMUST00000107934 Rassf8Q8CJ96 419 aa19.92■□□□□ 0.78
Shank1-201ENSMUST00000107934 Sycp2Q9CUU3 1500 aa19.91■□□□□ 0.78
Shank1-201ENSMUST00000107934 Kif3bQ61771 747 aa19.91■□□□□ 0.78
Shank1-201ENSMUST00000107934 1700123L14RikQ3V2K7 440 aa19.91■□□□□ 0.78
Shank1-201ENSMUST00000107934 Ccdc27Q3V036 639 aa19.89■□□□□ 0.78
Shank1-201ENSMUST00000107934 Q3TQI7 289 aaKnown RBP19.89■□□□□ 0.77
Shank1-201ENSMUST00000107934 Sart3Q9JLI8 962 aaKnown RBP19.89■□□□□ 0.77
Shank1-201ENSMUST00000107934 Tmco5bQ80X59 307 aa19.88■□□□□ 0.77
Shank1-201ENSMUST00000107934 Plekhh2Q8C115 1491 aa19.88■□□□□ 0.77
Shank1-201ENSMUST00000107934 Golga2Q921M4 999 aa19.87■□□□□ 0.77
Shank1-201ENSMUST00000107934 Nol10Q5RJG1 687 aaKnown RBP19.86■□□□□ 0.77
Shank1-201ENSMUST00000107934 SafbD3YXK2 937 aaKnown RBP19.85■□□□□ 0.77
Shank1-201ENSMUST00000107934 Senp3Q9EP97 568 aaKnown RBP19.84■□□□□ 0.77
Shank1-201ENSMUST00000107934 Znf330Q922H9 316 aa19.83■□□□□ 0.76
Shank1-201ENSMUST00000107934 Zscan21Q07231 555 aa19.83■□□□□ 0.76
Shank1-201ENSMUST00000107934 Spag9Q58A65 1321 aaKnown RBP19.82■□□□□ 0.76
Shank1-201ENSMUST00000107934 Anapc15P60007 132 aa19.82■□□□□ 0.76
Shank1-201ENSMUST00000107934 Supt16hQ920B9 1047 aa19.8■□□□□ 0.76
Shank1-201ENSMUST00000107934 Mak16Q8BGS0 296 aaKnown RBP19.79■□□□□ 0.76
Shank1-201ENSMUST00000107934 Srcin1Q9QWI6 1250 aa19.79■□□□□ 0.76
Shank1-201ENSMUST00000107934 HdgfP51859 237 aaKnown RBP19.78■□□□□ 0.76
Shank1-201ENSMUST00000107934 Phldb1Q6PDH0 1371 aaKnown RBP19.78■□□□□ 0.76
Shank1-201ENSMUST00000107934 Pcmtd1P59913 357 aa19.77■□□□□ 0.76
Shank1-201ENSMUST00000107934 Cluap1Q8R3P7 413 aa19.77■□□□□ 0.76
Shank1-201ENSMUST00000107934 CftrP26361 1476 aa19.76■□□□□ 0.75
Shank1-201ENSMUST00000107934 Carmil1Q6EDY6 1374 aa19.76■□□□□ 0.75
Shank1-201ENSMUST00000107934 CenpjQ569L8 1344 aa19.75■□□□□ 0.75
Shank1-201ENSMUST00000107934 CrbnQ8C7D2 445 aa19.75■□□□□ 0.75
Shank1-201ENSMUST00000107934 Chmp5Q9D7S9 219 aa19.75■□□□□ 0.75
Shank1-201ENSMUST00000107934 Fan1Q69ZT1 1020 aa19.75■□□□□ 0.75
Shank1-201ENSMUST00000107934 EspnQ9ET47 871 aa19.74■□□□□ 0.75
Shank1-201ENSMUST00000107934 Synj1Q8CHC4 1574 aa19.74■□□□□ 0.75
Shank1-201ENSMUST00000107934 Ccnb3Q810T2 1396 aa19.73■□□□□ 0.75
Shank1-201ENSMUST00000107934 Sart1Q9Z315 806 aaKnown RBP19.73■□□□□ 0.75
Shank1-201ENSMUST00000107934 Pibf1E9Q6K3 756 aa19.73■□□□□ 0.75
Shank1-201ENSMUST00000107934 Tcerg1Q8CGF7 1100 aaKnown RBP19.73■□□□□ 0.75
Shank1-201ENSMUST00000107934 Adam1bQ8R534 806 aa19.72■□□□□ 0.75
Shank1-201ENSMUST00000107934 Pde3bQ61409 1100 aa19.72■□□□□ 0.75
Shank1-201ENSMUST00000107934 Rsph4aQ8BYM7 716 aa19.72■□□□□ 0.75
Shank1-201ENSMUST00000107934 Slc4a1apE9PX68 744 aa19.71■□□□□ 0.75
Shank1-201ENSMUST00000107934 MecomP14404 1042 aa19.71■□□□□ 0.75
Shank1-201ENSMUST00000107934 Rapgef2Q8CHG7 1496 aa19.7■□□□□ 0.74
Shank1-201ENSMUST00000107934 Iffo2Q8R2V2 512 aa19.7■□□□□ 0.74
Shank1-201ENSMUST00000107934 Cecr2E9Q2Z1 1453 aa19.7■□□□□ 0.74
Shank1-201ENSMUST00000107934 Ap3b2Q9JME5 1082 aa19.7■□□□□ 0.74
Shank1-201ENSMUST00000107934 Ksr2Q3UVC0 959 aa19.69■□□□□ 0.74
Shank1-201ENSMUST00000107934 Mfap1aC0HKD8 439 aaKnown RBP19.68■□□□□ 0.74
Shank1-201ENSMUST00000107934 Mfap1bC0HKD9 439 aaKnown RBP19.68■□□□□ 0.74
Shank1-201ENSMUST00000107934 Chmp3Q9CQ10 224 aa19.68■□□□□ 0.74
Shank1-201ENSMUST00000107934 Utp14aQ640M1 767 aaKnown RBP19.68■□□□□ 0.74
Shank1-201ENSMUST00000107934 Erich6bQ9D4S6 220 aa19.67■□□□□ 0.74
Shank1-201ENSMUST00000107934 Ccar1Q8CH18 1146 aaKnown RBP19.67■□□□□ 0.74
Shank1-201ENSMUST00000107934 Pak3Q61036 559 aa19.65■□□□□ 0.74
Shank1-201ENSMUST00000107934 CgnP59242 1191 aa19.64■□□□□ 0.74
Shank1-201ENSMUST00000107934 Dnai1Q8C0M8 701 aa19.64■□□□□ 0.73
Shank1-201ENSMUST00000107934 PtmsQ9D0J8 101 aaKnown RBP19.64■□□□□ 0.73
Shank1-201ENSMUST00000107934 Stard8Q8K031 1019 aa19.64■□□□□ 0.73
Shank1-201ENSMUST00000107934 Brpf1B2RRD7 1212 aa19.63■□□□□ 0.73
Shank1-201ENSMUST00000107934 Smarca4Q3TKT4 1613 aaKnown RBP19.63■□□□□ 0.73
Shank1-201ENSMUST00000107934 Gm973E9Q295 1059 aa19.62■□□□□ 0.73
Shank1-201ENSMUST00000107934 Ipo8Q7TMY7 1010 aa19.61■□□□□ 0.73
Shank1-201ENSMUST00000107934 Dnai2A2AC93 623 aa19.6■□□□□ 0.73
Shank1-201ENSMUST00000107934 Ubap1lG3UW59 384 aa19.6■□□□□ 0.73
Shank1-201ENSMUST00000107934 UacaQ8CGB3 1411 aa19.6■□□□□ 0.73
Shank1-201ENSMUST00000107934 Tsen2Q6P7W5 460 aa19.6■□□□□ 0.73
Shank1-201ENSMUST00000107934 Atad2bE9Q166 1460 aaKnown RBP19.6■□□□□ 0.73
Shank1-201ENSMUST00000107934 Dnttip2Q8R2M2 758 aaKnown RBP19.59■□□□□ 0.73
Shank1-201ENSMUST00000107934 GorabQ8BRM2 368 aa19.59■□□□□ 0.73
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms