RNA–Protein interactions for RNA: ENSMUST00000106653.3

Usp47-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Usp47, Length 5,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-201ENSMUST00000106653 1700019A02RikA0A087WPV9 146 aa21.62■■□□□ 1.05
Usp47-201ENSMUST00000106653 Exoc6Q8R313 802 aa21.6■■□□□ 1.05
Usp47-201ENSMUST00000106653 Ccnb3Q810T2 1396 aa21.6■■□□□ 1.05
Usp47-201ENSMUST00000106653 Dbr1Q923B1 550 aa21.6■■□□□ 1.05
Usp47-201ENSMUST00000106653 Armcx1Q9CX83 456 aa21.59■■□□□ 1.05
Usp47-201ENSMUST00000106653 Rwdd1Q9CQK7 243 aa21.57■■□□□ 1.04
Usp47-201ENSMUST00000106653 Map7O88735 730 aa21.55■■□□□ 1.04
Usp47-201ENSMUST00000106653 Kif3bQ61771 747 aa21.55■■□□□ 1.04
Usp47-201ENSMUST00000106653 Rock2P70336 1388 aa21.54■■□□□ 1.04
Usp47-201ENSMUST00000106653 Mbd3Q9Z2D8 285 aaKnown RBP21.54■■□□□ 1.04
Usp47-201ENSMUST00000106653 Dhx29Q6PGC1 1365 aaKnown RBP21.53■■□□□ 1.04
Usp47-201ENSMUST00000106653 Iqgap2Q3UQ44 1575 aa21.53■■□□□ 1.04
Usp47-201ENSMUST00000106653 B4galnt3Q6L8S8 986 aa21.52■■□□□ 1.04
Usp47-201ENSMUST00000106653 Speer4f1Q9D5Q6 258 aa21.52■■□□□ 1.04
Usp47-201ENSMUST00000106653 Ppm1gQ61074 542 aa21.51■■□□□ 1.03
Usp47-201ENSMUST00000106653 Zscan21Q07231 555 aa21.49■■□□□ 1.03
Usp47-201ENSMUST00000106653 Ccdc9Q8VC31 543 aaKnown RBP21.49■■□□□ 1.03
Usp47-201ENSMUST00000106653 UacaQ8CGB3 1411 aa21.49■■□□□ 1.03
Usp47-201ENSMUST00000106653 SafbD3YXK2 937 aaKnown RBP21.49■■□□□ 1.03
Usp47-201ENSMUST00000106653 Sart1Q9Z315 806 aaKnown RBP21.49■■□□□ 1.03
Usp47-201ENSMUST00000106653 Psme1P97371 249 aa21.48■■□□□ 1.03
Usp47-201ENSMUST00000106653 Rtn4Q99P72 1162 aaKnown RBP21.48■■□□□ 1.03
Usp47-201ENSMUST00000106653 Trim44Q9QXA7 346 aa21.47■■□□□ 1.03
Usp47-201ENSMUST00000106653 Dcaf11Q91VU6 549 aa21.47■■□□□ 1.03
Usp47-201ENSMUST00000106653 Htatsf1Q8BGC0 757 aa21.46■■□□□ 1.03
Usp47-201ENSMUST00000106653 Plcb2A3KGF7 1181 aa21.45■■□□□ 1.02
Usp47-201ENSMUST00000106653 Srcin1Q9QWI6 1250 aa21.45■■□□□ 1.02
Usp47-201ENSMUST00000106653 U2af1Q9D883 239 aaKnown RBP21.44■■□□□ 1.02
Usp47-201ENSMUST00000106653 Mak16Q8BGS0 296 aaKnown RBP21.43■■□□□ 1.02
Usp47-201ENSMUST00000106653 Rtf1A2AQ19 715 aaKnown RBP21.43■■□□□ 1.02
Usp47-201ENSMUST00000106653 Txndc2Q6P902 515 aa21.43■■□□□ 1.02
Usp47-201ENSMUST00000106653 PtmaP26350 111 aa21.42■■□□□ 1.02
Usp47-201ENSMUST00000106653 WrnO09053 1401 aa21.42■■□□□ 1.02
Usp47-201ENSMUST00000106653 Slc4a3P16283 1227 aa21.41■■□□□ 1.02
Usp47-201ENSMUST00000106653 U2surpQ6NV83 1029 aaKnown RBP21.41■■□□□ 1.02
Usp47-201ENSMUST00000106653 Plin1Q8CGN5 517 aa21.41■■□□□ 1.02
Usp47-201ENSMUST00000106653 Golga2Q921M4 999 aa21.4■■□□□ 1.02
Usp47-201ENSMUST00000106653 KnstrnQ9D9Z1 312 aaKnown RBP21.39■■□□□ 1.01
Usp47-201ENSMUST00000106653 Birc3O08863 600 aa21.39■■□□□ 1.01
Usp47-201ENSMUST00000106653 Hsp90b1P08113 802 aaKnown RBP21.37■■□□□ 1.01
Usp47-201ENSMUST00000106653 Usp47Q8BY87 1376 aa21.37■■□□□ 1.01
Usp47-201ENSMUST00000106653 Ecm2Q5FW85 670 aa21.36■■□□□ 1.01
Usp47-201ENSMUST00000106653 HnrnpuQ8VEK3 800 aaKnown RBP21.36■■□□□ 1.01
Usp47-201ENSMUST00000106653 Znf326O88291 580 aa21.36■■□□□ 1.01
Usp47-201ENSMUST00000106653 Ccdc27Q3V036 639 aa21.35■■□□□ 1.01
Usp47-201ENSMUST00000106653 CatipB9EKE5 520 aa21.34■■□□□ 1.01
Usp47-201ENSMUST00000106653 Fan1Q69ZT1 1020 aa21.34■■□□□ 1.01
Usp47-201ENSMUST00000106653 Rsph4aQ8BYM7 716 aa21.34■■□□□ 1.01
Usp47-201ENSMUST00000106653 Slc4a1apE9PX68 744 aa21.33■■□□□ 1.01
Usp47-201ENSMUST00000106653 Supt16hQ920B9 1047 aa21.33■■□□□ 1.01
Usp47-201ENSMUST00000106653 Tcerg1Q8CGF7 1100 aaKnown RBP21.33■■□□□ 1.01
Usp47-201ENSMUST00000106653 Sox12Q04890 314 aa21.33■■□□□ 1
Usp47-201ENSMUST00000106653 Znf316Q6PGE4 1016 aa21.33■■□□□ 1
Usp47-201ENSMUST00000106653 Stard8Q8K031 1019 aa21.33■■□□□ 1
Usp47-201ENSMUST00000106653 Ythdc1E9Q5K9 736 aaKnown RBP21.32■■□□□ 1
Usp47-201ENSMUST00000106653 Cc2d2bA0A286YDU8 1405 aa21.3■■□□□ 1
Usp47-201ENSMUST00000106653 Pes1Q9EQ61 584 aaKnown RBP21.3■■□□□ 1
Usp47-201ENSMUST00000106653 Ncoa2Q61026 1462 aa21.29■■□□□ 1
Usp47-201ENSMUST00000106653 CenpjQ569L8 1344 aa21.29■■□□□ 1
Usp47-201ENSMUST00000106653 Chmp5Q9D7S9 219 aa21.29■■□□□ 1
Usp47-201ENSMUST00000106653 Tmco5bQ80X59 307 aa21.29■■□□□ 1
Usp47-201ENSMUST00000106653 Cc2d2aQ8CFW7 1633 aa21.29■■□□□ 1
Usp47-201ENSMUST00000106653 CrbnQ8C7D2 445 aa21.28■■□□□ 1
Usp47-201ENSMUST00000106653 Spag9Q58A65 1321 aaKnown RBP21.26■□□□□ 0.99
Usp47-201ENSMUST00000106653 Shroom4Q1W617 1475 aa21.26■□□□□ 0.99
Usp47-201ENSMUST00000106653 MccE9PWI3 1003 aa21.25■□□□□ 0.99
Usp47-201ENSMUST00000106653 MlecQ6ZQI3 291 aaKnown RBP21.25■□□□□ 0.99
Usp47-201ENSMUST00000106653 Soga1E1U8D0 1418 aa21.25■□□□□ 0.99
Usp47-201ENSMUST00000106653 Cux1P53564 1515 aa21.24■□□□□ 0.99
Usp47-201ENSMUST00000106653 Jph4Q80WT0 628 aa21.24■□□□□ 0.99
Usp47-201ENSMUST00000106653 Sart3Q9JLI8 962 aaKnown RBP21.24■□□□□ 0.99
Usp47-201ENSMUST00000106653 Q3TQI7 289 aaKnown RBP21.23■□□□□ 0.99
Usp47-201ENSMUST00000106653 EspnQ9ET47 871 aa21.23■□□□□ 0.99
Usp47-201ENSMUST00000106653 Efcab5A0JP43 1406 aa21.22■□□□□ 0.99
Usp47-201ENSMUST00000106653 Pank3Q8R2W9 370 aa21.22■□□□□ 0.99
Usp47-201ENSMUST00000106653 Utp14aQ640M1 767 aaKnown RBP21.22■□□□□ 0.99
Usp47-201ENSMUST00000106653 Tdrd9Q14BI7 1383 aa21.21■□□□□ 0.99
Usp47-201ENSMUST00000106653 Lmod3E9QA62 571 aa21.21■□□□□ 0.99
Usp47-201ENSMUST00000106653 Tnnt1O88346 262 aa21.21■□□□□ 0.99
Usp47-201ENSMUST00000106653 Clstn1Q9EPL2 979 aa21.21■□□□□ 0.99
Usp47-201ENSMUST00000106653 Znf330Q922H9 316 aa21.2■□□□□ 0.98
Usp47-201ENSMUST00000106653 Sh3bp5Q9Z131 463 aa21.19■□□□□ 0.98
Usp47-201ENSMUST00000106653 Top2aQ01320 1528 aaKnown RBP21.19■□□□□ 0.98
Usp47-201ENSMUST00000106653 Polr1aO35134 1717 aaKnown RBP21.18■□□□□ 0.98
Usp47-201ENSMUST00000106653 Pabpn1Q8CCS6 302 aaKnown RBP21.18■□□□□ 0.98
Usp47-201ENSMUST00000106653 Smg6P61406 1418 aaKnown RBP21.18■□□□□ 0.98
Usp47-201ENSMUST00000106653 Ksr2Q3UVC0 959 aa21.18■□□□□ 0.98
Usp47-201ENSMUST00000106653 Cluap1Q8R3P7 413 aa21.17■□□□□ 0.98
Usp47-201ENSMUST00000106653 Casc1Q6TDU8 730 aa21.17■□□□□ 0.98
Usp47-201ENSMUST00000106653 Ccar1Q8CH18 1146 aaKnown RBP21.16■□□□□ 0.98
Usp47-201ENSMUST00000106653 Rad54l2Q99NG0 1466 aa21.15■□□□□ 0.98
Usp47-201ENSMUST00000106653 PnnO35691 725 aaKnown RBP21.15■□□□□ 0.98
Usp47-201ENSMUST00000106653 Eif4g2Q62448 906 aaKnown RBP21.15■□□□□ 0.98
Usp47-201ENSMUST00000106653 Usp40Q8BWR4 1235 aa21.15■□□□□ 0.98
Usp47-201ENSMUST00000106653 Spryd3E9Q9B3 442 aa21.14■□□□□ 0.98
Usp47-201ENSMUST00000106653 Ggt6Q6PDE7 497 aa21.14■□□□□ 0.98
Usp47-201ENSMUST00000106653 Senp3Q9EP97 568 aaKnown RBP21.14■□□□□ 0.97
Usp47-201ENSMUST00000106653 Inpp5dQ9ES52 1191 aa21.13■□□□□ 0.97
Usp47-201ENSMUST00000106653 Tsen2Q6P7W5 460 aa21.12■□□□□ 0.97
Usp47-201ENSMUST00000106653 Dapk1Q80YE7 1442 aa21.11■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms