RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Ush1cQ9ES64 910 aa13.02□□□□□ -0.33
Lig4-201ENSMUST00000095476 Atp1b4Q99ME6 356 aa13.01□□□□□ -0.33
Lig4-201ENSMUST00000095476 Gtf2a1Q99PM3 378 aa13.01□□□□□ -0.33
Lig4-201ENSMUST00000095476 Baz1bQ9Z277 1479 aa13.01□□□□□ -0.33
Lig4-201ENSMUST00000095476 Gm6268A2A3U9 297 aa13.01□□□□□ -0.33
Lig4-201ENSMUST00000095476 Pak3Q61036 559 aa13.01□□□□□ -0.33
Lig4-201ENSMUST00000095476 Chmp4bQ9D8B3 224 aaKnown RBP13□□□□□ -0.33
Lig4-201ENSMUST00000095476 Cep162Q6ZQ06 1403 aa13□□□□□ -0.33
Lig4-201ENSMUST00000095476 Map7d2A2AG50 781 aa12.99□□□□□ -0.33
Lig4-201ENSMUST00000095476 NudcO35685 332 aaKnown RBP12.97□□□□□ -0.33
Lig4-201ENSMUST00000095476 IbspQ61711 324 aa12.97□□□□□ -0.33
Lig4-201ENSMUST00000095476 Gm973E9Q295 1059 aa12.96□□□□□ -0.33
Lig4-201ENSMUST00000095476 Kiaa0754Q69ZZ9 979 aa12.96□□□□□ -0.34
Lig4-201ENSMUST00000095476 Calcoco2A2A6M5 331 aa12.95□□□□□ -0.34
Lig4-201ENSMUST00000095476 Atad2bE9Q166 1460 aaKnown RBP12.94□□□□□ -0.34
Lig4-201ENSMUST00000095476 Washc2Q6PGL7 1334 aa12.94□□□□□ -0.34
Lig4-201ENSMUST00000095476 Mfap1aC0HKD8 439 aaKnown RBP12.94□□□□□ -0.34
Lig4-201ENSMUST00000095476 Mfap1bC0HKD9 439 aaKnown RBP12.94□□□□□ -0.34
Lig4-201ENSMUST00000095476 Iqcf3Q9D498 203 aa12.93□□□□□ -0.34
Lig4-201ENSMUST00000095476 Speer4f1Q9D5Q6 258 aa12.93□□□□□ -0.34
Lig4-201ENSMUST00000095476 Tpm2P58774 284 aa12.92□□□□□ -0.34
Lig4-201ENSMUST00000095476 Rundc1Q0VDN7 615 aa12.91□□□□□ -0.34
Lig4-201ENSMUST00000095476 Znf326O88291 580 aa12.91□□□□□ -0.34
Lig4-201ENSMUST00000095476 RdxP26043 583 aaKnown RBP12.9□□□□□ -0.34
Lig4-201ENSMUST00000095476 Kif15Q6P9L6 1387 aa12.9□□□□□ -0.34
Lig4-201ENSMUST00000095476 Trim30aP15533 496 aa12.9□□□□□ -0.34
Lig4-201ENSMUST00000095476 BccipQ9CWI3 316 aa12.9□□□□□ -0.34
Lig4-201ENSMUST00000095476 Pkd2O35245 966 aa12.89□□□□□ -0.35
Lig4-201ENSMUST00000095476 Rsph3aQ3UFY4 516 aa12.89□□□□□ -0.35
Lig4-201ENSMUST00000095476 Ccdc18Q640L5 1455 aa12.89□□□□□ -0.35
Lig4-201ENSMUST00000095476 Eif2s2Q99L45 331 aaKnown RBP12.88□□□□□ -0.35
Lig4-201ENSMUST00000095476 Phf14Q9D4H9 881 aa12.88□□□□□ -0.35
Lig4-201ENSMUST00000095476 MccE9PWI3 1003 aa12.87□□□□□ -0.35
Lig4-201ENSMUST00000095476 Fkbp15Q6P9Q6 1216 aaKnown RBP12.87□□□□□ -0.35
Lig4-201ENSMUST00000095476 Pcmtd1P59913 357 aa12.87□□□□□ -0.35
Lig4-201ENSMUST00000095476 Prkrip1Q9CWV6 186 aaKnown RBP12.85□□□□□ -0.35
Lig4-201ENSMUST00000095476 Ak7Q9D2H2 614 aa12.85□□□□□ -0.35
Lig4-201ENSMUST00000095476 Arhgap35Q91YM2 1499 aa12.85□□□□□ -0.35
Lig4-201ENSMUST00000095476 Gpatch11Q3UFS4 262 aa12.84□□□□□ -0.35
Lig4-201ENSMUST00000095476 Phldb1Q6PDH0 1371 aaKnown RBP12.84□□□□□ -0.35
Lig4-201ENSMUST00000095476 Kdm2aP59997 1161 aa12.84□□□□□ -0.35
Lig4-201ENSMUST00000095476 Hsp90b1P08113 802 aaKnown RBP12.83□□□□□ -0.35
Lig4-201ENSMUST00000095476 Cluap1Q8R3P7 413 aa12.83□□□□□ -0.35
Lig4-201ENSMUST00000095476 HnrnpuQ8VEK3 800 aaKnown RBP12.83□□□□□ -0.35
Lig4-201ENSMUST00000095476 Mroh3A0A1D5RM54 893 aa12.83□□□□□ -0.36
Lig4-201ENSMUST00000095476 Fyco1Q8VDC1 1437 aa12.82□□□□□ -0.36
Lig4-201ENSMUST00000095476 Mphosph9A6H5Y1 991 aa12.82□□□□□ -0.36
Lig4-201ENSMUST00000095476 Ylpm1Q9R0I7 1386 aaKnown RBP12.82□□□□□ -0.36
Lig4-201ENSMUST00000095476 Cecr2E9Q2Z1 1453 aa12.82□□□□□ -0.36
Lig4-201ENSMUST00000095476 Mtus2Q3UHD3 1353 aa12.82□□□□□ -0.36
Lig4-201ENSMUST00000095476 Ttll13A4Q9F6 804 aa12.81□□□□□ -0.36
Lig4-201ENSMUST00000095476 Cspp1B2RX88 1205 aa12.81□□□□□ -0.36
Lig4-201ENSMUST00000095476 BicraF8VPZ9 1578 aa12.81□□□□□ -0.36
Lig4-201ENSMUST00000095476 CrbnQ8C7D2 445 aa12.81□□□□□ -0.36
Lig4-201ENSMUST00000095476 Fam43aQ8BUP8 424 aa12.8□□□□□ -0.36
Lig4-201ENSMUST00000095476 Tmf1B9EKI3 1091 aa12.79□□□□□ -0.36
Lig4-201ENSMUST00000095476 Rabep1O35551 862 aa12.79□□□□□ -0.36
Lig4-201ENSMUST00000095476 GorabQ8BRM2 368 aa12.78□□□□□ -0.36
Lig4-201ENSMUST00000095476 DmtnQ9WV69 405 aa12.78□□□□□ -0.36
Lig4-201ENSMUST00000095476 Cald1E9QA15 768 aaKnown RBP12.78□□□□□ -0.36
Lig4-201ENSMUST00000095476 Gm20521D3Z5F7 333 aa12.78□□□□□ -0.36
Lig4-201ENSMUST00000095476 Glipr1l2Q9CQ35 332 aa12.78□□□□□ -0.36
Lig4-201ENSMUST00000095476 Crybg2B7ZCC2 1516 aa12.77□□□□□ -0.36
Lig4-201ENSMUST00000095476 Golga2Q921M4 999 aa12.77□□□□□ -0.36
Lig4-201ENSMUST00000095476 Kif20aP97329 887 aa12.77□□□□□ -0.37
Lig4-201ENSMUST00000095476 Srpk2O54781 681 aaKnown RBP12.76□□□□□ -0.37
Lig4-201ENSMUST00000095476 Rbm10Q99KG3 930 aaKnown RBP12.76□□□□□ -0.37
Lig4-201ENSMUST00000095476 PnnO35691 725 aaKnown RBP12.75□□□□□ -0.37
Lig4-201ENSMUST00000095476 Fmn1Q05860 1466 aa12.75□□□□□ -0.37
Lig4-201ENSMUST00000095476 Znf692Q3U381 531 aa12.74□□□□□ -0.37
Lig4-201ENSMUST00000095476 Isy1Q69ZQ2 285 aaKnown RBP12.74□□□□□ -0.37
Lig4-201ENSMUST00000095476 Rock2P70336 1388 aa12.74□□□□□ -0.37
Lig4-201ENSMUST00000095476 SetQ9EQU5 289 aaKnown RBP12.74□□□□□ -0.37
Lig4-201ENSMUST00000095476 Kif3aP28741 701 aa12.73□□□□□ -0.37
Lig4-201ENSMUST00000095476 Casq1O09165 405 aa12.73□□□□□ -0.37
Lig4-201ENSMUST00000095476 IqubQ8CDK3 788 aa12.73□□□□□ -0.37
Lig4-201ENSMUST00000095476 Atp6v1dP57746 247 aa12.73□□□□□ -0.37
Lig4-201ENSMUST00000095476 Taf3Q5HZG4 932 aa12.73□□□□□ -0.37
Lig4-201ENSMUST00000095476 Smarca4Q3TKT4 1613 aaKnown RBP12.73□□□□□ -0.37
Lig4-201ENSMUST00000095476 Kif16bB1AVY7 1312 aa12.73□□□□□ -0.37
Lig4-201ENSMUST00000095476 Ccdc183A2AJB1 534 aa12.73□□□□□ -0.37
Lig4-201ENSMUST00000095476 Plppr3Q7TPB0 716 aa12.72□□□□□ -0.37
Lig4-201ENSMUST00000095476 AampJ3QN89 436 aa12.72□□□□□ -0.37
Lig4-201ENSMUST00000095476 Rfx1P48377 963 aa12.72□□□□□ -0.37
Lig4-201ENSMUST00000095476 Paxip1Q6NZQ4 1056 aa12.72□□□□□ -0.37
Lig4-201ENSMUST00000095476 Fam13bQ8K2H3 851 aa12.72□□□□□ -0.37
Lig4-201ENSMUST00000095476 Stard8Q8K031 1019 aa12.71□□□□□ -0.37
Lig4-201ENSMUST00000095476 Smarce1O54941 411 aaKnown RBP12.71□□□□□ -0.37
Lig4-201ENSMUST00000095476 Slc4a2P13808 1237 aaKnown RBP12.7□□□□□ -0.38
Lig4-201ENSMUST00000095476 Exosc9Q9JHI7 438 aaKnown RBP12.7□□□□□ -0.38
Lig4-201ENSMUST00000095476 CgnP59242 1191 aa12.69□□□□□ -0.38
Lig4-201ENSMUST00000095476 Ccar1Q8CH18 1146 aaKnown RBP12.68□□□□□ -0.38
Lig4-201ENSMUST00000095476 Gripap1Q8VD04 806 aa12.68□□□□□ -0.38
Lig4-201ENSMUST00000095476 Pes1Q9EQ61 584 aaKnown RBP12.68□□□□□ -0.38
Lig4-201ENSMUST00000095476 Ankrd36D3Z4K0 1415 aa12.68□□□□□ -0.38
Lig4-201ENSMUST00000095476 Ccdc173A0JLY1 547 aa12.68□□□□□ -0.38
Lig4-201ENSMUST00000095476 Rock1P70335 1354 aa12.68□□□□□ -0.38
Lig4-201ENSMUST00000095476 PnisrA2AJT4 805 aaKnown RBP12.68□□□□□ -0.38
Lig4-201ENSMUST00000095476 Iqgap2Q3UQ44 1575 aa12.68□□□□□ -0.38
Lig4-201ENSMUST00000095476 TimelessQ9R1X4 1197 aa12.67□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms