RNA–Protein interactions for RNA: ENSMUST00000088790.8

Ret-202, Transcript of Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ret, Length 4,497 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ret-202ENSMUST00000088790 Efcab5A0JP43 1406 aa20.58■□□□□ 0.88
Ret-202ENSMUST00000088790 Usp47Q8BY87 1376 aa20.57■□□□□ 0.88
Ret-202ENSMUST00000088790 Top2aQ01320 1528 aaKnown RBP20.57■□□□□ 0.88
Ret-202ENSMUST00000088790 Tcerg1Q8CGF7 1100 aaKnown RBP20.57■□□□□ 0.88
Ret-202ENSMUST00000088790 Shroom4Q1W617 1475 aa20.56■□□□□ 0.88
Ret-202ENSMUST00000088790 WrnO09053 1401 aa20.56■□□□□ 0.88
Ret-202ENSMUST00000088790 B4galnt3Q6L8S8 986 aa20.55■□□□□ 0.88
Ret-202ENSMUST00000088790 Srcin1Q9QWI6 1250 aa20.55■□□□□ 0.88
Ret-202ENSMUST00000088790 Mbd3Q9Z2D8 285 aaKnown RBP20.55■□□□□ 0.88
Ret-202ENSMUST00000088790 Ppm1gQ61074 542 aa20.54■□□□□ 0.88
Ret-202ENSMUST00000088790 Gm6268A2A3U9 297 aa20.54■□□□□ 0.88
Ret-202ENSMUST00000088790 Speer4f1Q9D5Q6 258 aa20.54■□□□□ 0.88
Ret-202ENSMUST00000088790 DekQ7TNV0 380 aaKnown RBP20.53■□□□□ 0.88
Ret-202ENSMUST00000088790 Ccdc27Q3V036 639 aa20.53■□□□□ 0.88
Ret-202ENSMUST00000088790 Supt16hQ920B9 1047 aa20.53■□□□□ 0.88
Ret-202ENSMUST00000088790 Kif3bQ61771 747 aa20.52■□□□□ 0.88
Ret-202ENSMUST00000088790 NudcO35685 332 aaKnown RBP20.51■□□□□ 0.87
Ret-202ENSMUST00000088790 Rock2P70336 1388 aa20.5■□□□□ 0.87
Ret-202ENSMUST00000088790 Smg6P61406 1418 aaKnown RBP20.5■□□□□ 0.87
Ret-202ENSMUST00000088790 Irx6Q9ER75 438 aa20.5■□□□□ 0.87
Ret-202ENSMUST00000088790 Cc2d2aQ8CFW7 1633 aa20.48■□□□□ 0.87
Ret-202ENSMUST00000088790 Dcaf11Q91VU6 549 aa20.48■□□□□ 0.87
Ret-202ENSMUST00000088790 Chmp5Q9D7S9 219 aa20.47■□□□□ 0.87
Ret-202ENSMUST00000088790 NgefQ8CHT1 710 aa20.47■□□□□ 0.87
Ret-202ENSMUST00000088790 Armcx1Q9CX83 456 aa20.47■□□□□ 0.87
Ret-202ENSMUST00000088790 Stk26Q99JT2 416 aa20.47■□□□□ 0.87
Ret-202ENSMUST00000088790 Iqcf3Q9D498 203 aa20.45■□□□□ 0.86
Ret-202ENSMUST00000088790 Vsig10D3YX43 558 aa20.45■□□□□ 0.86
Ret-202ENSMUST00000088790 Naip1Q9QWK5 1403 aa20.45■□□□□ 0.86
Ret-202ENSMUST00000088790 Chmp4bQ9D8B3 224 aaKnown RBP20.44■□□□□ 0.86
Ret-202ENSMUST00000088790 Htatsf1Q8BGC0 757 aa20.43■□□□□ 0.86
Ret-202ENSMUST00000088790 Arid4bA2CG63 1314 aaKnown RBP20.43■□□□□ 0.86
Ret-202ENSMUST00000088790 Slc4a1apE9PX68 744 aa20.43■□□□□ 0.86
Ret-202ENSMUST00000088790 NrkQ9R0G8 1455 aa20.42■□□□□ 0.86
Ret-202ENSMUST00000088790 1700019A02RikA0A087WPV9 146 aa20.42■□□□□ 0.86
Ret-202ENSMUST00000088790 Ppp1r18Q8BQ30 594 aa20.42■□□□□ 0.86
Ret-202ENSMUST00000088790 Ankrd36D3Z4K0 1415 aa20.41■□□□□ 0.86
Ret-202ENSMUST00000088790 Golga2Q921M4 999 aa20.41■□□□□ 0.86
Ret-202ENSMUST00000088790 Tdrd9Q14BI7 1383 aa20.41■□□□□ 0.86
Ret-202ENSMUST00000088790 U2af1Q9D883 239 aaKnown RBP20.41■□□□□ 0.86
Ret-202ENSMUST00000088790 Zfp777B9EKF4 885 aa20.4■□□□□ 0.86
Ret-202ENSMUST00000088790 Map7O88735 730 aa20.4■□□□□ 0.86
Ret-202ENSMUST00000088790 Jph4Q80WT0 628 aa20.38■□□□□ 0.85
Ret-202ENSMUST00000088790 Arap1Q4LDD4 1452 aa20.37■□□□□ 0.85
Ret-202ENSMUST00000088790 Cc2d2bA0A286YDU8 1405 aa20.37■□□□□ 0.85
Ret-202ENSMUST00000088790 Rad54l2Q99NG0 1466 aa20.36■□□□□ 0.85
Ret-202ENSMUST00000088790 Fan1Q69ZT1 1020 aa20.36■□□□□ 0.85
Ret-202ENSMUST00000088790 Pank3Q8R2W9 370 aa20.36■□□□□ 0.85
Ret-202ENSMUST00000088790 CrbnQ8C7D2 445 aa20.35■□□□□ 0.85
Ret-202ENSMUST00000088790 Stard8Q8K031 1019 aa20.35■□□□□ 0.85
Ret-202ENSMUST00000088790 Duox2A2AQ99 1517 aa20.34■□□□□ 0.85
Ret-202ENSMUST00000088790 Vps8Q0P5W1 1427 aa20.33■□□□□ 0.85
Ret-202ENSMUST00000088790 Spag9Q58A65 1321 aaKnown RBP20.32■□□□□ 0.84
Ret-202ENSMUST00000088790 Plcb2A3KGF7 1181 aa20.32■□□□□ 0.84
Ret-202ENSMUST00000088790 EspnQ9ET47 871 aa20.32■□□□□ 0.84
Ret-202ENSMUST00000088790 Dapk1Q80YE7 1442 aa20.32■□□□□ 0.84
Ret-202ENSMUST00000088790 PtprkP35822 1457 aa20.31■□□□□ 0.84
Ret-202ENSMUST00000088790 Cux1P53564 1515 aa20.31■□□□□ 0.84
Ret-202ENSMUST00000088790 Trim44Q9QXA7 346 aa20.31■□□□□ 0.84
Ret-202ENSMUST00000088790 Map3k1P53349 1493 aa20.31■□□□□ 0.84
Ret-202ENSMUST00000088790 Ncapd3Q6ZQK0 1506 aa20.3■□□□□ 0.84
Ret-202ENSMUST00000088790 MyclP10166 368 aa20.3■□□□□ 0.84
Ret-202ENSMUST00000088790 Inpp5dQ9ES52 1191 aa20.3■□□□□ 0.84
Ret-202ENSMUST00000088790 Zfp644E9QA22 1323 aa20.28■□□□□ 0.84
Ret-202ENSMUST00000088790 Grin2bQ01097 1482 aa20.28■□□□□ 0.84
Ret-202ENSMUST00000088790 KnstrnQ9D9Z1 312 aaKnown RBP20.27■□□□□ 0.84
Ret-202ENSMUST00000088790 Arhgef5E9Q7D5 1581 aa20.26■□□□□ 0.83
Ret-202ENSMUST00000088790 Mroh2bQ7M6Y6 1581 aa20.26■□□□□ 0.83
Ret-202ENSMUST00000088790 Birc3O08863 600 aa20.26■□□□□ 0.83
Ret-202ENSMUST00000088790 Polr1aO35134 1717 aaKnown RBP20.26■□□□□ 0.83
Ret-202ENSMUST00000088790 Nolc1E9Q5C9 702 aaKnown RBP20.25■□□□□ 0.83
Ret-202ENSMUST00000088790 Ecm2Q5FW85 670 aa20.25■□□□□ 0.83
Ret-202ENSMUST00000088790 Tmco5bQ80X59 307 aa20.25■□□□□ 0.83
Ret-202ENSMUST00000088790 Plin1Q8CGN5 517 aa20.25■□□□□ 0.83
Ret-202ENSMUST00000088790 Frmpd1A2AKB4 1549 aa20.25■□□□□ 0.83
Ret-202ENSMUST00000088790 PogzQ8BZH4 1409 aaKnown RBP20.24■□□□□ 0.83
Ret-202ENSMUST00000088790 U2surpQ6NV83 1029 aaKnown RBP20.24■□□□□ 0.83
Ret-202ENSMUST00000088790 Dnai1Q8C0M8 701 aa20.24■□□□□ 0.83
Ret-202ENSMUST00000088790 Ncoa2Q61026 1462 aa20.24■□□□□ 0.83
Ret-202ENSMUST00000088790 BicraF8VPZ9 1578 aa20.22■□□□□ 0.83
Ret-202ENSMUST00000088790 Soga1E1U8D0 1418 aa20.22■□□□□ 0.83
Ret-202ENSMUST00000088790 Fam184bQ0KK56 942 aa20.21■□□□□ 0.83
Ret-202ENSMUST00000088790 Ksr2Q3UVC0 959 aa20.21■□□□□ 0.83
Ret-202ENSMUST00000088790 HnrnpuQ8VEK3 800 aaKnown RBP20.2■□□□□ 0.82
Ret-202ENSMUST00000088790 Txndc2Q6P902 515 aa20.19■□□□□ 0.82
Ret-202ENSMUST00000088790 Ipo9Q91YE6 1041 aa20.19■□□□□ 0.82
Ret-202ENSMUST00000088790 Cluap1Q8R3P7 413 aa20.19■□□□□ 0.82
Ret-202ENSMUST00000088790 Psme1P97371 249 aa20.19■□□□□ 0.82
Ret-202ENSMUST00000088790 Usp40Q8BWR4 1235 aa20.19■□□□□ 0.82
Ret-202ENSMUST00000088790 Rock1P70335 1354 aa20.19■□□□□ 0.82
Ret-202ENSMUST00000088790 Rtf1A2AQ19 715 aaKnown RBP20.18■□□□□ 0.82
Ret-202ENSMUST00000088790 Utp14aQ640M1 767 aaKnown RBP20.18■□□□□ 0.82
Ret-202ENSMUST00000088790 Zscan10Q3URR7 782 aa20.17■□□□□ 0.82
Ret-202ENSMUST00000088790 CenpjQ569L8 1344 aa20.17■□□□□ 0.82
Ret-202ENSMUST00000088790 Znf316Q6PGE4 1016 aa20.17■□□□□ 0.82
Ret-202ENSMUST00000088790 Top2bQ64511 1612 aa20.17■□□□□ 0.82
Ret-202ENSMUST00000088790 Ift140E9PY46 1464 aa20.17■□□□□ 0.82
Ret-202ENSMUST00000088790 Urb2E9Q7L1 1524 aaKnown RBP20.17■□□□□ 0.82
Ret-202ENSMUST00000088790 PtmaP26350 111 aa20.17■□□□□ 0.82
Ret-202ENSMUST00000088790 Znf710Q3U288 666 aa20.16■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 320.2 ms