RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 PtmsQ9D0J8 101 aaKnown RBP17.7■□□□□ 0.42
Col3a1-201ENSMUST00000087883 Calcoco2A2A6M5 331 aa17.7■□□□□ 0.42
Col3a1-201ENSMUST00000087883 Rrp12Q6P5B0 1295 aaKnown RBP17.68■□□□□ 0.42
Col3a1-201ENSMUST00000087883 Mak16Q8BGS0 296 aaKnown RBP17.68■□□□□ 0.42
Col3a1-201ENSMUST00000087883 Ipo8Q7TMY7 1010 aa17.67■□□□□ 0.42
Col3a1-201ENSMUST00000087883 Rsf1E9PWW9 1441 aaKnown RBP17.66■□□□□ 0.42
Col3a1-201ENSMUST00000087883 Rundc1Q0VDN7 615 aa17.66■□□□□ 0.42
Col3a1-201ENSMUST00000087883 Taok2Q6ZQ29 1240 aa17.66■□□□□ 0.42
Col3a1-201ENSMUST00000087883 Sin3aQ60520 1274 aaKnown RBP17.65■□□□□ 0.42
Col3a1-201ENSMUST00000087883 Mfap1aC0HKD8 439 aaKnown RBP17.64■□□□□ 0.41
Col3a1-201ENSMUST00000087883 Mfap1bC0HKD9 439 aaKnown RBP17.64■□□□□ 0.41
Col3a1-201ENSMUST00000087883 Anapc15P60007 132 aa17.63■□□□□ 0.41
Col3a1-201ENSMUST00000087883 Rassf8Q8CJ96 419 aa17.63■□□□□ 0.41
Col3a1-201ENSMUST00000087883 Zfp777B9EKF4 885 aa17.62■□□□□ 0.41
Col3a1-201ENSMUST00000087883 Fhad1A6PWD2 1420 aa17.62■□□□□ 0.41
Col3a1-201ENSMUST00000087883 Cluap1Q8R3P7 413 aa17.61■□□□□ 0.41
Col3a1-201ENSMUST00000087883 U2surpQ6NV83 1029 aaKnown RBP17.61■□□□□ 0.41
Col3a1-201ENSMUST00000087883 Zscan21Q07231 555 aa17.6■□□□□ 0.41
Col3a1-201ENSMUST00000087883 CgnP59242 1191 aa17.59■□□□□ 0.41
Col3a1-201ENSMUST00000087883 Pkd2O35245 966 aa17.59■□□□□ 0.41
Col3a1-201ENSMUST00000087883 Kiaa0754Q69ZZ9 979 aa17.59■□□□□ 0.41
Col3a1-201ENSMUST00000087883 Ccdc18Q640L5 1455 aa17.59■□□□□ 0.41
Col3a1-201ENSMUST00000087883 Gtf3c3Q3TMP1 882 aa17.57■□□□□ 0.4
Col3a1-201ENSMUST00000087883 SlkO54988 1233 aa17.57■□□□□ 0.4
Col3a1-201ENSMUST00000087883 ChgaP26339 463 aaKnown RBP17.57■□□□□ 0.4
Col3a1-201ENSMUST00000087883 Sart3Q9JLI8 962 aaKnown RBP17.57■□□□□ 0.4
Col3a1-201ENSMUST00000087883 Nolc1E9Q5C9 702 aaKnown RBP17.56■□□□□ 0.4
Col3a1-201ENSMUST00000087883 Tmco5bQ80X59 307 aa17.56■□□□□ 0.4
Col3a1-201ENSMUST00000087883 Tmf1B9EKI3 1091 aa17.56■□□□□ 0.4
Col3a1-201ENSMUST00000087883 RdxP26043 583 aaKnown RBP17.55■□□□□ 0.4
Col3a1-201ENSMUST00000087883 Iffo2Q8R2V2 512 aa17.55■□□□□ 0.4
Col3a1-201ENSMUST00000087883 Ecm2Q5FW85 670 aa17.54■□□□□ 0.4
Col3a1-201ENSMUST00000087883 Rtf1A2AQ19 715 aaKnown RBP17.53■□□□□ 0.4
Col3a1-201ENSMUST00000087883 Znf330Q922H9 316 aa17.53■□□□□ 0.4
Col3a1-201ENSMUST00000087883 Ddrgk1Q80WW9 315 aa17.53■□□□□ 0.4
Col3a1-201ENSMUST00000087883 GorabQ8BRM2 368 aa17.53■□□□□ 0.4
Col3a1-201ENSMUST00000087883 Plin1Q8CGN5 517 aa17.52■□□□□ 0.4
Col3a1-201ENSMUST00000087883 Map4P27546 1125 aaKnown RBP17.52■□□□□ 0.39
Col3a1-201ENSMUST00000087883 Gpatch11Q3UFS4 262 aa17.52■□□□□ 0.39
Col3a1-201ENSMUST00000087883 Golga2Q921M4 999 aa17.52■□□□□ 0.39
Col3a1-201ENSMUST00000087883 U2af1Q9D883 239 aaKnown RBP17.52■□□□□ 0.39
Col3a1-201ENSMUST00000087883 Cald1E9QA15 768 aaKnown RBP17.51■□□□□ 0.39
Col3a1-201ENSMUST00000087883 Ifit1bl1D3Z6F0 470 aa17.5■□□□□ 0.39
Col3a1-201ENSMUST00000087883 Gtf2e1Q9D0D5 440 aa17.49■□□□□ 0.39
Col3a1-201ENSMUST00000087883 Trim30aP15533 496 aa17.48■□□□□ 0.39
Col3a1-201ENSMUST00000087883 Pde3bQ61409 1100 aa17.48■□□□□ 0.39
Col3a1-201ENSMUST00000087883 CrbnQ8C7D2 445 aa17.48■□□□□ 0.39
Col3a1-201ENSMUST00000087883 VgfQ0VGU4 617 aa17.47■□□□□ 0.39
Col3a1-201ENSMUST00000087883 Becn1O88597 448 aa17.47■□□□□ 0.39
Col3a1-201ENSMUST00000087883 R3hcc1Q8BSI6 488 aa17.47■□□□□ 0.39
Col3a1-201ENSMUST00000087883 SetQ9EQU5 289 aaKnown RBP17.47■□□□□ 0.39
Col3a1-201ENSMUST00000087883 MecomP14404 1042 aa17.46■□□□□ 0.39
Col3a1-201ENSMUST00000087883 CrebrfQ8CDG5 640 aaKnown RBP17.46■□□□□ 0.39
Col3a1-201ENSMUST00000087883 Dcaf11Q91VU6 549 aa17.45■□□□□ 0.38
Col3a1-201ENSMUST00000087883 Smarce1O54941 411 aaKnown RBP17.44■□□□□ 0.38
Col3a1-201ENSMUST00000087883 4933402E13RikQ9D4D2 429 aa17.44■□□□□ 0.38
Col3a1-201ENSMUST00000087883 Tpm3-rs7D3Z2H9 248 aa17.44■□□□□ 0.38
Col3a1-201ENSMUST00000087883 Mphosph9A6H5Y1 991 aa17.43■□□□□ 0.38
Col3a1-201ENSMUST00000087883 Q3TQI7 289 aaKnown RBP17.42■□□□□ 0.38
Col3a1-201ENSMUST00000087883 Stk26Q99JT2 416 aa17.42■□□□□ 0.38
Col3a1-201ENSMUST00000087883 Tnnt1O88346 262 aa17.42■□□□□ 0.38
Col3a1-201ENSMUST00000087883 CntlnA2AM05 1397 aa17.41■□□□□ 0.38
Col3a1-201ENSMUST00000087883 Trak1Q6PD31 939 aa17.41■□□□□ 0.38
Col3a1-201ENSMUST00000087883 Ksr2Q3UVC0 959 aa17.4■□□□□ 0.38
Col3a1-201ENSMUST00000087883 Senp3Q9EP97 568 aaKnown RBP17.39■□□□□ 0.37
Col3a1-201ENSMUST00000087883 Kif27Q7M6Z4 1394 aa17.39■□□□□ 0.37
Col3a1-201ENSMUST00000087883 Cspp1B2RX88 1205 aa17.38■□□□□ 0.37
Col3a1-201ENSMUST00000087883 Ccar1Q8CH18 1146 aaKnown RBP17.38■□□□□ 0.37
Col3a1-201ENSMUST00000087883 Birc3O08863 600 aa17.37■□□□□ 0.37
Col3a1-201ENSMUST00000087883 Ush1cQ9ES64 910 aa17.37■□□□□ 0.37
Col3a1-201ENSMUST00000087883 Rock2P70336 1388 aa17.37■□□□□ 0.37
Col3a1-201ENSMUST00000087883 Map7d2A2AG50 781 aa17.37■□□□□ 0.37
Col3a1-201ENSMUST00000087883 Atp6v1dP57746 247 aa17.37■□□□□ 0.37
Col3a1-201ENSMUST00000087883 Rsph3aQ3UFY4 516 aa17.37■□□□□ 0.37
Col3a1-201ENSMUST00000087883 Eif4g2Q62448 906 aaKnown RBP17.36■□□□□ 0.37
Col3a1-201ENSMUST00000087883 Cep162Q6ZQ06 1403 aa17.36■□□□□ 0.37
Col3a1-201ENSMUST00000087883 Brpf1B2RRD7 1212 aa17.36■□□□□ 0.37
Col3a1-201ENSMUST00000087883 MyclP10166 368 aa17.36■□□□□ 0.37
Col3a1-201ENSMUST00000087883 Ercc6F8VPZ5 1481 aa17.35■□□□□ 0.37
Col3a1-201ENSMUST00000087883 Ylpm1Q9R0I7 1386 aaKnown RBP17.34■□□□□ 0.37
Col3a1-201ENSMUST00000087883 Arhgap35Q91YM2 1499 aa17.34■□□□□ 0.37
Col3a1-201ENSMUST00000087883 Baz1bQ9Z277 1479 aa17.34■□□□□ 0.37
Col3a1-201ENSMUST00000087883 Nol10Q5RJG1 687 aaKnown RBP17.34■□□□□ 0.37
Col3a1-201ENSMUST00000087883 Mre11Q61216 706 aa17.33■□□□□ 0.37
Col3a1-201ENSMUST00000087883 Mical1Q8VDP3 1048 aa17.33■□□□□ 0.36
Col3a1-201ENSMUST00000087883 Cabp1Q9JLK7 227 aa17.33■□□□□ 0.36
Col3a1-201ENSMUST00000087883 Fyco1Q8VDC1 1437 aa17.33■□□□□ 0.36
Col3a1-201ENSMUST00000087883 Ccdc146E9Q9F7 977 aa17.32■□□□□ 0.36
Col3a1-201ENSMUST00000087883 Sf3a1Q8K4Z5 791 aaKnown RBP17.32■□□□□ 0.36
Col3a1-201ENSMUST00000087883 Tpm3P21107 285 aaKnown RBP17.31■□□□□ 0.36
Col3a1-201ENSMUST00000087883 Aebp1Q640N1 1128 aa17.31■□□□□ 0.36
Col3a1-201ENSMUST00000087883 Spag9Q58A65 1321 aaKnown RBP17.3■□□□□ 0.36
Col3a1-201ENSMUST00000087883 Ccer1Q9CQL2 403 aa17.3■□□□□ 0.36
Col3a1-201ENSMUST00000087883 Fbxo2Q80UW2 297 aa17.3■□□□□ 0.36
Col3a1-201ENSMUST00000087883 Pknox2Q8BG99 474 aa17.3■□□□□ 0.36
Col3a1-201ENSMUST00000087883 Ccdc88bQ4QRL3 1481 aa17.29■□□□□ 0.36
Col3a1-201ENSMUST00000087883 Pibf1E9Q6K3 756 aa17.28■□□□□ 0.36
Col3a1-201ENSMUST00000087883 Slc4a1apE9PX68 744 aa17.27■□□□□ 0.36
Col3a1-201ENSMUST00000087883 Srcin1Q9QWI6 1250 aa17.27■□□□□ 0.36
Col3a1-201ENSMUST00000087883 Dnai2A2AC93 623 aa17.27■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms