RNA–Protein interactions for RNA: ENSMUST00000087258.9

Tro-202, Transcript of Tro protein, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Tro, Length 6,559 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-202ENSMUST00000087258 Gpatch11Q3UFS4 262 aa13.95□□□□□ -0.18
Tro-202ENSMUST00000087258 KnstrnQ9D9Z1 312 aaKnown RBP13.95□□□□□ -0.18
Tro-202ENSMUST00000087258 MecomP14404 1042 aa13.95□□□□□ -0.18
Tro-202ENSMUST00000087258 Paf1Q8K2T8 535 aa13.95□□□□□ -0.18
Tro-202ENSMUST00000087258 Tpm3-rs7D3Z2H9 248 aa13.94□□□□□ -0.18
Tro-202ENSMUST00000087258 Tmco5bQ80X59 307 aa13.94□□□□□ -0.18
Tro-202ENSMUST00000087258 Brd4Q9ESU6 1400 aaKnown RBP13.94□□□□□ -0.18
Tro-202ENSMUST00000087258 Gm973E9Q295 1059 aa13.94□□□□□ -0.18
Tro-202ENSMUST00000087258 Q3TQI7 289 aaKnown RBP13.93□□□□□ -0.18
Tro-202ENSMUST00000087258 Ccdc27Q3V036 639 aa13.93□□□□□ -0.18
Tro-202ENSMUST00000087258 Birc3O08863 600 aa13.93□□□□□ -0.18
Tro-202ENSMUST00000087258 Calcoco2A2A6M5 331 aa13.92□□□□□ -0.18
Tro-202ENSMUST00000087258 Pibf1E9Q6K3 756 aa13.92□□□□□ -0.18
Tro-202ENSMUST00000087258 Aebp2Q9Z248 504 aaKnown RBP13.92□□□□□ -0.18
Tro-202ENSMUST00000087258 Dnai2A2AC93 623 aa13.91□□□□□ -0.18
Tro-202ENSMUST00000087258 Cluap1Q8R3P7 413 aa13.91□□□□□ -0.18
Tro-202ENSMUST00000087258 SetQ9EQU5 289 aaKnown RBP13.91□□□□□ -0.18
Tro-202ENSMUST00000087258 Brpf1B2RRD7 1212 aa13.9□□□□□ -0.18
Tro-202ENSMUST00000087258 Ciz1Q8VEH2 845 aa13.9□□□□□ -0.18
Tro-202ENSMUST00000087258 Psme1P97371 249 aa13.89□□□□□ -0.19
Tro-202ENSMUST00000087258 MsnP26041 577 aaKnown RBP13.88□□□□□ -0.19
Tro-202ENSMUST00000087258 Sart3Q9JLI8 962 aaKnown RBP13.88□□□□□ -0.19
Tro-202ENSMUST00000087258 HnrnpuQ8VEK3 800 aaKnown RBP13.87□□□□□ -0.19
Tro-202ENSMUST00000087258 Speer4f1Q9D5Q6 258 aa13.87□□□□□ -0.19
Tro-202ENSMUST00000087258 Kiaa0754Q69ZZ9 979 aa13.87□□□□□ -0.19
Tro-202ENSMUST00000087258 Fam193aQ8CGI1 1231 aaKnown RBP13.86□□□□□ -0.19
Tro-202ENSMUST00000087258 Kri1Q8VDQ9 704 aaKnown RBP13.86□□□□□ -0.19
Tro-202ENSMUST00000087258 Mfap1aC0HKD8 439 aaKnown RBP13.86□□□□□ -0.19
Tro-202ENSMUST00000087258 Mfap1bC0HKD9 439 aaKnown RBP13.86□□□□□ -0.19
Tro-202ENSMUST00000087258 GorabQ8BRM2 368 aa13.86□□□□□ -0.19
Tro-202ENSMUST00000087258 Samd1D3YXK1 519 aa13.85□□□□□ -0.19
Tro-202ENSMUST00000087258 Tpd52l1O54818 204 aa13.85□□□□□ -0.19
Tro-202ENSMUST00000087258 Ftsj3Q9DBE9 838 aaKnown RBP13.85□□□□□ -0.19
Tro-202ENSMUST00000087258 Hdgfl1Q2VPR5 283 aa13.85□□□□□ -0.19
Tro-202ENSMUST00000087258 Rwdd1Q9CQK7 243 aa13.84□□□□□ -0.19
Tro-202ENSMUST00000087258 Ripply1Q2WG77 201 aa13.84□□□□□ -0.19
Tro-202ENSMUST00000087258 Taok2Q6ZQ29 1240 aa13.84□□□□□ -0.19
Tro-202ENSMUST00000087258 SafbD3YXK2 937 aaKnown RBP13.83□□□□□ -0.19
Tro-202ENSMUST00000087258 Pak3Q61036 559 aa13.83□□□□□ -0.2
Tro-202ENSMUST00000087258 Mtus2Q3UHD3 1353 aa13.83□□□□□ -0.2
Tro-202ENSMUST00000087258 Arid3cA6PWV5 409 aa13.82□□□□□ -0.2
Tro-202ENSMUST00000087258 AcrbpQ3V140 540 aa13.82□□□□□ -0.2
Tro-202ENSMUST00000087258 Cald1E9QA15 768 aaKnown RBP13.82□□□□□ -0.2
Tro-202ENSMUST00000087258 IbspQ61711 324 aa13.81□□□□□ -0.2
Tro-202ENSMUST00000087258 Fnbp4Q6ZQ03 1031 aa13.81□□□□□ -0.2
Tro-202ENSMUST00000087258 Podxl2Q8CAE9 603 aa13.81□□□□□ -0.2
Tro-202ENSMUST00000087258 U2af1Q9D883 239 aaKnown RBP13.81□□□□□ -0.2
Tro-202ENSMUST00000087258 Zfp777B9EKF4 885 aa13.8□□□□□ -0.2
Tro-202ENSMUST00000087258 Txndc2Q6P902 515 aa13.8□□□□□ -0.2
Tro-202ENSMUST00000087258 Cwc22Q8C5N3 908 aaKnown RBP13.8□□□□□ -0.2
Tro-202ENSMUST00000087258 Tpm3P21107 285 aaKnown RBP13.79□□□□□ -0.2
Tro-202ENSMUST00000087258 Drc7Q6V3W6 876 aa13.79□□□□□ -0.2
Tro-202ENSMUST00000087258 R3hcc1Q8BSI6 488 aa13.79□□□□□ -0.2
Tro-202ENSMUST00000087258 Cep164Q5DU05 1446 aa13.78□□□□□ -0.2
Tro-202ENSMUST00000087258 Znf704Q9ERQ3 566 aa13.77□□□□□ -0.2
Tro-202ENSMUST00000087258 Ccer1Q9CQL2 403 aa13.77□□□□□ -0.2
Tro-202ENSMUST00000087258 Ifit1bl1D3Z6F0 470 aa13.77□□□□□ -0.21
Tro-202ENSMUST00000087258 AU015836B2RUM3 263 aa13.77□□□□□ -0.21
Tro-202ENSMUST00000087258 Slc4a10Q5DTL9 1118 aa13.77□□□□□ -0.21
Tro-202ENSMUST00000087258 Wdr78E9PYY5 807 aa13.76□□□□□ -0.21
Tro-202ENSMUST00000087258 RdxP26043 583 aaKnown RBP13.76□□□□□ -0.21
Tro-202ENSMUST00000087258 1700123L14RikQ3V2K7 440 aa13.75□□□□□ -0.21
Tro-202ENSMUST00000087258 Krt82Q99M74 516 aa13.75□□□□□ -0.21
Tro-202ENSMUST00000087258 Supt16hQ920B9 1047 aa13.75□□□□□ -0.21
Tro-202ENSMUST00000087258 Kif15Q6P9L6 1387 aa13.74□□□□□ -0.21
Tro-202ENSMUST00000087258 Spag9Q58A65 1321 aaKnown RBP13.74□□□□□ -0.21
Tro-202ENSMUST00000087258 Ccdc43Q9CR29 222 aaKnown RBP13.74□□□□□ -0.21
Tro-202ENSMUST00000087258 AppP12023 770 aa13.73□□□□□ -0.21
Tro-202ENSMUST00000087258 Gtf2e1Q9D0D5 440 aa13.73□□□□□ -0.21
Tro-202ENSMUST00000087258 Odf2A3KGV1 830 aaKnown RBP13.72□□□□□ -0.21
Tro-202ENSMUST00000087258 Dhx16G3X8X0 1044 aaKnown RBP13.72□□□□□ -0.21
Tro-202ENSMUST00000087258 SlkO54988 1233 aa13.72□□□□□ -0.21
Tro-202ENSMUST00000087258 HdgfP51859 237 aaKnown RBP13.72□□□□□ -0.21
Tro-202ENSMUST00000087258 Irx3P81067 507 aa13.72□□□□□ -0.21
Tro-202ENSMUST00000087258 Rundc1Q0VDN7 615 aa13.72□□□□□ -0.21
Tro-202ENSMUST00000087258 Ccdc96Q9CR92 584 aa13.72□□□□□ -0.21
Tro-202ENSMUST00000087258 Dcaf11Q91VU6 549 aa13.71□□□□□ -0.21
Tro-202ENSMUST00000087258 Tpm4Q6IRU2 248 aa13.71□□□□□ -0.21
Tro-202ENSMUST00000087258 Gm21969J3QJZ1 289 aa13.7□□□□□ -0.22
Tro-202ENSMUST00000087258 Ccar1Q8CH18 1146 aaKnown RBP13.7□□□□□ -0.22
Tro-202ENSMUST00000087258 Trim30aP15533 496 aa13.7□□□□□ -0.22
Tro-202ENSMUST00000087258 Ccdc47Q9D024 483 aaKnown RBP13.7□□□□□ -0.22
Tro-202ENSMUST00000087258 Chmp5Q9D7S9 219 aa13.7□□□□□ -0.22
Tro-202ENSMUST00000087258 Fhad1A6PWD2 1420 aa13.69□□□□□ -0.22
Tro-202ENSMUST00000087258 Pde3bQ61409 1100 aa13.69□□□□□ -0.22
Tro-202ENSMUST00000087258 Dnai1Q8C0M8 701 aa13.69□□□□□ -0.22
Tro-202ENSMUST00000087258 A0A0U1RNP2 1173 aa13.68□□□□□ -0.22
Tro-202ENSMUST00000087258 Ccdc146E9Q9F7 977 aa13.68□□□□□ -0.22
Tro-202ENSMUST00000087258 FosbP13346 338 aa13.68□□□□□ -0.22
Tro-202ENSMUST00000087258 Bcl11bQ99PV8 884 aa13.68□□□□□ -0.22
Tro-202ENSMUST00000087258 CrbnQ8C7D2 445 aa13.67□□□□□ -0.22
Tro-202ENSMUST00000087258 Golga2Q921M4 999 aa13.67□□□□□ -0.22
Tro-202ENSMUST00000087258 Tpm2P58774 284 aa13.67□□□□□ -0.22
Tro-202ENSMUST00000087258 Smarce1O54941 411 aaKnown RBP13.67□□□□□ -0.22
Tro-202ENSMUST00000087258 Becn1O88597 448 aa13.66□□□□□ -0.22
Tro-202ENSMUST00000087258 PtmsQ9D0J8 101 aaKnown RBP13.66□□□□□ -0.22
Tro-202ENSMUST00000087258 Hspa5P20029 655 aaKnown RBP13.66□□□□□ -0.22
Tro-202ENSMUST00000087258 Gabpb2P81069 414 aa13.66□□□□□ -0.22
Tro-202ENSMUST00000087258 EspnQ9ET47 871 aa13.66□□□□□ -0.22
Tro-202ENSMUST00000087258 Map4P27546 1125 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms