RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Dhx57Q6P5D3 1388 aaKnown RBP19.69■□□□□ 0.74
Ccdc28a-202ENSMUST00000080860 Cdc42bpaQ3UU96 1719 aa19.68■□□□□ 0.74
Ccdc28a-202ENSMUST00000080860 Peg3Q3URU2 1571 aa19.68■□□□□ 0.74
Ccdc28a-202ENSMUST00000080860 CntlnA2AM05 1397 aa19.68■□□□□ 0.74
Ccdc28a-202ENSMUST00000080860 A2mQ6GQT1 1474 aa19.67■□□□□ 0.74
Ccdc28a-202ENSMUST00000080860 Abca9Q8K449 1623 aa19.67■□□□□ 0.74
Ccdc28a-202ENSMUST00000080860 Gm1043A0A140LJC2 1431 aa19.65■□□□□ 0.74
Ccdc28a-202ENSMUST00000080860 Rnf17Q99MV7 1640 aa19.65■□□□□ 0.74
Ccdc28a-202ENSMUST00000080860 Mlh3A0A1Y7VMP7 1443 aa19.64■□□□□ 0.73
Ccdc28a-202ENSMUST00000080860 Ncapd3Q6ZQK0 1506 aa19.6■□□□□ 0.73
Ccdc28a-202ENSMUST00000080860 Dnajc5gQ8C632 165 aa19.57■□□□□ 0.72
Ccdc28a-202ENSMUST00000080860 Synj2Q9D2G5 1434 aa19.57■□□□□ 0.72
Ccdc28a-202ENSMUST00000080860 Hecw2Q6I6G8 1578 aa19.55■□□□□ 0.72
Ccdc28a-202ENSMUST00000080860 Naip1Q9QWK5 1403 aa19.55■□□□□ 0.72
Ccdc28a-202ENSMUST00000080860 Pdcd11Q6NS46 1862 aaKnown RBP19.54■□□□□ 0.72
Ccdc28a-202ENSMUST00000080860 Plekhg3Q4VAC9 1341 aa19.51■□□□□ 0.71
Ccdc28a-202ENSMUST00000080860 Tiam1Q60610 1591 aa19.49■□□□□ 0.71
Ccdc28a-202ENSMUST00000080860 Abcc3B2RX12 1523 aa19.49■□□□□ 0.71
Ccdc28a-202ENSMUST00000080860 NexmifQ5DTT1 1515 aa19.49■□□□□ 0.71
Ccdc28a-202ENSMUST00000080860 Lmtk2Q3TYD6 1471 aa19.48■□□□□ 0.71
Ccdc28a-202ENSMUST00000080860 Kidins220E9Q9B7 1793 aa19.48■□□□□ 0.71
Ccdc28a-202ENSMUST00000080860 Kdm5cP41230 1554 aa19.48■□□□□ 0.71
Ccdc28a-202ENSMUST00000080860 Gm32742A0A1B0GT42 1604 aa19.47■□□□□ 0.71
Ccdc28a-202ENSMUST00000080860 Naip2Q9QUK4 1447 aa19.45■□□□□ 0.7
Ccdc28a-202ENSMUST00000080860 Cfap74Q3UY96 1578 aa19.43■□□□□ 0.7
Ccdc28a-202ENSMUST00000080860 Kdm6bQ5NCY0 1641 aa19.43■□□□□ 0.7
Ccdc28a-202ENSMUST00000080860 Zmym4A2A791 1549 aaKnown RBP19.42■□□□□ 0.7
Ccdc28a-202ENSMUST00000080860 Arhgap5P97393 1501 aa19.42■□□□□ 0.7
Ccdc28a-202ENSMUST00000080860 Ap3b1Q9Z1T1 1105 aa19.42■□□□□ 0.7
Ccdc28a-202ENSMUST00000080860 Kif14L0N7N1 1674 aaKnown RBP19.41■□□□□ 0.7
Ccdc28a-202ENSMUST00000080860 Adamtsl3G3UXC7 1706 aa19.41■□□□□ 0.7
Ccdc28a-202ENSMUST00000080860 Caskin1Q6P9K8 1431 aa19.4■□□□□ 0.7
Ccdc28a-202ENSMUST00000080860 Atp10aO54827 1508 aa19.4■□□□□ 0.7
Ccdc28a-202ENSMUST00000080860 OvosQ3UU35 1456 aa19.38■□□□□ 0.69
Ccdc28a-202ENSMUST00000080860 Cul9Q80TT8 1865 aa19.37■□□□□ 0.69
Ccdc28a-202ENSMUST00000080860 Qser1A2BIE1 1698 aa19.36■□□□□ 0.69
Ccdc28a-202ENSMUST00000080860 Trappc8E9PWG2 1437 aa19.35■□□□□ 0.69
Ccdc28a-202ENSMUST00000080860 Adcy10Q8C0T9 1614 aa19.35■□□□□ 0.69
Ccdc28a-202ENSMUST00000080860 Dip2cE9PWR4 1557 aa19.34■□□□□ 0.69
Ccdc28a-202ENSMUST00000080860 RereQ80TZ9 1558 aa19.34■□□□□ 0.69
Ccdc28a-202ENSMUST00000080860 Lemd3Q9WU40 921 aa19.3■□□□□ 0.68
Ccdc28a-202ENSMUST00000080860 Yeats2Q3TUF7 1407 aa19.3■□□□□ 0.68
Ccdc28a-202ENSMUST00000080860 Arhgef40Q3UPH7 1517 aa19.3■□□□□ 0.68
Ccdc28a-202ENSMUST00000080860 Camsap2Q8C1B1 1461 aa19.29■□□□□ 0.68
Ccdc28a-202ENSMUST00000080860 Ptch1Q61115 1434 aa19.29■□□□□ 0.68
Ccdc28a-202ENSMUST00000080860 Tdrd9Q14BI7 1383 aa19.29■□□□□ 0.68
Ccdc28a-202ENSMUST00000080860 Brwd3A2AHJ4 1799 aa19.29■□□□□ 0.68
Ccdc28a-202ENSMUST00000080860 NpatQ8BMA5 1420 aa19.27■□□□□ 0.68
Ccdc28a-202ENSMUST00000080860 Ccnb3Q810T2 1396 aa19.27■□□□□ 0.68
Ccdc28a-202ENSMUST00000080860 Hecw1Q8K4P8 1604 aa19.26■□□□□ 0.67
Ccdc28a-202ENSMUST00000080860 Lmod2Q3UHZ5 550 aa19.26■□□□□ 0.67
Ccdc28a-202ENSMUST00000080860 Cdc42bpbQ7TT50 1713 aa19.25■□□□□ 0.67
Ccdc28a-202ENSMUST00000080860 Neurl4Q5NCX5 1563 aa19.25■□□□□ 0.67
Ccdc28a-202ENSMUST00000080860 Trpm1Q2TV84 1622 aa19.21■□□□□ 0.67
Ccdc28a-202ENSMUST00000080860 Cdc42bpgQ80UW5 1551 aa19.2■□□□□ 0.66
Ccdc28a-202ENSMUST00000080860 Fhod3Q76LL6 1578 aa19.19■□□□□ 0.66
Ccdc28a-202ENSMUST00000080860 Nos1Q9Z0J4 1429 aa19.18■□□□□ 0.66
Ccdc28a-202ENSMUST00000080860 Talpid3E9PV87 1520 aa19.17■□□□□ 0.66
Ccdc28a-202ENSMUST00000080860 Mast1Q9R1L5 1570 aa19.16■□□□□ 0.66
Ccdc28a-202ENSMUST00000080860 Plppr3Q7TPB0 716 aa19.16■□□□□ 0.66
Ccdc28a-202ENSMUST00000080860 Cdk11bP24788 784 aaKnown RBP19.15■□□□□ 0.66
Ccdc28a-202ENSMUST00000080860 Sart1Q9Z315 806 aaKnown RBP19.15■□□□□ 0.66
Ccdc28a-202ENSMUST00000080860 MlecQ6ZQI3 291 aaKnown RBP19.13■□□□□ 0.65
Ccdc28a-202ENSMUST00000080860 PtprmP28828 1452 aa19.12■□□□□ 0.65
Ccdc28a-202ENSMUST00000080860 Myom2Q14BI5 1463 aa19.09■□□□□ 0.65
Ccdc28a-202ENSMUST00000080860 SphkapQ6NSW3 1687 aa19.07■□□□□ 0.64
Ccdc28a-202ENSMUST00000080860 Abcc5Q9R1X5 1436 aa19.07■□□□□ 0.64
Ccdc28a-202ENSMUST00000080860 Xrn1P97789 1719 aaKnown RBP19.05■□□□□ 0.64
Ccdc28a-202ENSMUST00000080860 Uggt2E9Q4X2 1504 aa19.05■□□□□ 0.64
Ccdc28a-202ENSMUST00000080860 Dennd4bQ3U1Y4 1499 aa19.05■□□□□ 0.64
Ccdc28a-202ENSMUST00000080860 Naip6Q9JIB6 1403 aa19.05■□□□□ 0.64
Ccdc28a-202ENSMUST00000080860 3425401B19RikD3Z1D3 1412 aa19.04■□□□□ 0.64
Ccdc28a-202ENSMUST00000080860 Ercc6l2Q9JIM3 1537 aa19.04■□□□□ 0.64
Ccdc28a-202ENSMUST00000080860 Znf518aB2RRF6 1478 aaKnown RBP19.03■□□□□ 0.64
Ccdc28a-202ENSMUST00000080860 Fmn2Q9JL04 1578 aa19.03■□□□□ 0.64
Ccdc28a-202ENSMUST00000080860 Prdm16A2A935 1275 aa19.03■□□□□ 0.64
Ccdc28a-202ENSMUST00000080860 Abca6Q8K441 1624 aa19.03■□□□□ 0.64
Ccdc28a-202ENSMUST00000080860 Topbp1Q6ZQF0 1515 aa19.02■□□□□ 0.64
Ccdc28a-202ENSMUST00000080860 Cfap65Q3V0B4 1847 aa19.01■□□□□ 0.63
Ccdc28a-202ENSMUST00000080860 Adgrl2Q8JZZ7 1487 aa19■□□□□ 0.63
Ccdc28a-202ENSMUST00000080860 Plch2A2AP18 1501 aa19■□□□□ 0.63
Ccdc28a-202ENSMUST00000080860 Gli2Q0VGT2 1544 aa19■□□□□ 0.63
Ccdc28a-202ENSMUST00000080860 Ahdc1Q6PAL7 1594 aaKnown RBP18.99■□□□□ 0.63
Ccdc28a-202ENSMUST00000080860 Map3k5O35099 1380 aa18.99■□□□□ 0.63
Ccdc28a-202ENSMUST00000080860 Abca17E9PX95 1733 aa18.99■□□□□ 0.63
Ccdc28a-202ENSMUST00000080860 Supt6hQ62383 1726 aaKnown RBP18.99■□□□□ 0.63
Ccdc28a-202ENSMUST00000080860 Dip2bQ3UH60 1574 aa18.98■□□□□ 0.63
Ccdc28a-202ENSMUST00000080860 Knl1Q66JQ7 1612 aa18.97■□□□□ 0.63
Ccdc28a-202ENSMUST00000080860 Plekhh2Q8C115 1491 aa18.97■□□□□ 0.63
Ccdc28a-202ENSMUST00000080860 Trpm2Q91YD4 1506 aa18.96■□□□□ 0.63
Ccdc28a-202ENSMUST00000080860 Bcl9Q9D219 1425 aa18.96■□□□□ 0.63
Ccdc28a-202ENSMUST00000080860 RictorQ6QI06 1708 aa18.96■□□□□ 0.63
Ccdc28a-202ENSMUST00000080860 Il16O54824 1322 aa18.96■□□□□ 0.63
Ccdc28a-202ENSMUST00000080860 Cyb5rlB1AS42 316 aa18.94■□□□□ 0.62
Ccdc28a-202ENSMUST00000080860 Mtus2Q3UHD3 1353 aa18.93■□□□□ 0.62
Ccdc28a-202ENSMUST00000080860 Arhgap23Q69ZH9 1483 aa18.93■□□□□ 0.62
Ccdc28a-202ENSMUST00000080860 Kdm3bQ6ZPY7 1562 aa18.91■□□□□ 0.62
Ccdc28a-202ENSMUST00000080860 4930407I10RikD3Z5T8 1512 aa18.9■□□□□ 0.62
Ccdc28a-202ENSMUST00000080860 Naip5Q9R016 1403 aa18.89■□□□□ 0.61
Ccdc28a-202ENSMUST00000080860 Med14A2ABV5 1459 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms