RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 Ube2uB1AUC4 352 aa15.42■□□□□ 0.06
Ssh1-201ENSMUST00000077689 Fyco1Q8VDC1 1437 aa15.41■□□□□ 0.06
Ssh1-201ENSMUST00000077689 Zbtb7cQ8VCZ7 619 aa15.41■□□□□ 0.06
Ssh1-201ENSMUST00000077689 IbspQ61711 324 aa15.4■□□□□ 0.06
Ssh1-201ENSMUST00000077689 NclP09405 707 aaKnown RBP15.4■□□□□ 0.06
Ssh1-201ENSMUST00000077689 SynmQ70IV5 1561 aa15.39■□□□□ 0.05
Ssh1-201ENSMUST00000077689 Arhgap27A2AB59 869 aa15.39■□□□□ 0.05
Ssh1-201ENSMUST00000077689 Zfp91Q62511 572 aa15.39■□□□□ 0.05
Ssh1-201ENSMUST00000077689 Samd9lQ69Z37 1561 aa15.39■□□□□ 0.05
Ssh1-201ENSMUST00000077689 Urb2E9Q7L1 1524 aaKnown RBP15.36■□□□□ 0.05
Ssh1-201ENSMUST00000077689 Kdm5bQ80Y84 1544 aa15.36■□□□□ 0.05
Ssh1-201ENSMUST00000077689 Tcerg1Q8CGF7 1100 aaKnown RBP15.35■□□□□ 0.05
Ssh1-201ENSMUST00000077689 Lmo7E9PYF4 1699 aaKnown RBP15.35■□□□□ 0.05
Ssh1-201ENSMUST00000077689 Sin3aQ60520 1274 aaKnown RBP15.32■□□□□ 0.04
Ssh1-201ENSMUST00000077689 3425401B19RikD3Z1D3 1412 aa15.31■□□□□ 0.04
Ssh1-201ENSMUST00000077689 Polr1aO35134 1717 aaKnown RBP15.31■□□□□ 0.04
Ssh1-201ENSMUST00000077689 Chic2Q9D9G3 165 aa15.3■□□□□ 0.04
Ssh1-201ENSMUST00000077689 Crocc2F6XLV1 1638 aa15.3■□□□□ 0.04
Ssh1-201ENSMUST00000077689 TchhA0A0B4J1F9 1599 aa15.3■□□□□ 0.04
Ssh1-201ENSMUST00000077689 Mrc2Q64449 1479 aa15.3■□□□□ 0.04
Ssh1-201ENSMUST00000077689 Mia2Q91ZV0 1396 aa15.29■□□□□ 0.04
Ssh1-201ENSMUST00000077689 Dnajc5bQ9CQ94 199 aa15.28■□□□□ 0.04
Ssh1-201ENSMUST00000077689 Anp32bQ9EST5 272 aaKnown RBP15.28■□□□□ 0.04
Ssh1-201ENSMUST00000077689 EprsQ8CGC7 1512 aaKnown RBP15.28■□□□□ 0.04
Ssh1-201ENSMUST00000077689 Kcnh8P59111 1102 aa15.27■□□□□ 0.04
Ssh1-201ENSMUST00000077689 Gm1043A0A140LJC2 1431 aa15.26■□□□□ 0.03
Ssh1-201ENSMUST00000077689 Hspa5P20029 655 aaKnown RBP15.26■□□□□ 0.03
Ssh1-201ENSMUST00000077689 Kif27Q7M6Z4 1394 aa15.25■□□□□ 0.03
Ssh1-201ENSMUST00000077689 CanxP35564 591 aaKnown RBP15.25■□□□□ 0.03
Ssh1-201ENSMUST00000077689 Stard8Q8K031 1019 aa15.25■□□□□ 0.03
Ssh1-201ENSMUST00000077689 CadpsQ80TJ1 1355 aa15.24■□□□□ 0.03
Ssh1-201ENSMUST00000077689 Ccnb3Q810T2 1396 aa15.24■□□□□ 0.03
Ssh1-201ENSMUST00000077689 Kif21aQ9QXL2 1672 aa15.24■□□□□ 0.03
Ssh1-201ENSMUST00000077689 Gm7298A0A0N4SVU1 1476 aa15.24■□□□□ 0.03
Ssh1-201ENSMUST00000077689 Fhad1A6PWD2 1420 aa15.23■□□□□ 0.03
Ssh1-201ENSMUST00000077689 Plb1Q3TTY0 1478 aa15.23■□□□□ 0.03
Ssh1-201ENSMUST00000077689 Pla2r1Q62028 1487 aa15.22■□□□□ 0.03
Ssh1-201ENSMUST00000077689 Sart3Q9JLI8 962 aaKnown RBP15.22■□□□□ 0.03
Ssh1-201ENSMUST00000077689 Peg3Q3URU2 1571 aa15.22■□□□□ 0.03
Ssh1-201ENSMUST00000077689 Smg6P61406 1418 aaKnown RBP15.22■□□□□ 0.03
Ssh1-201ENSMUST00000077689 Vps8Q0P5W1 1427 aa15.18■□□□□ 0.02
Ssh1-201ENSMUST00000077689 Grin2aP35436 1464 aa15.18■□□□□ 0.02
Ssh1-201ENSMUST00000077689 Naip2Q9QUK4 1447 aa15.18■□□□□ 0.02
Ssh1-201ENSMUST00000077689 Gpatch8A2A6A1 1505 aa15.17■□□□□ 0.02
Ssh1-201ENSMUST00000077689 Magi3Q9EQJ9 1476 aa15.17■□□□□ 0.02
Ssh1-201ENSMUST00000077689 Mrs2Q5NCE8 434 aa15.17■□□□□ 0.02
Ssh1-201ENSMUST00000077689 Mroh3A0A1D5RM54 893 aa15.16■□□□□ 0.02
Ssh1-201ENSMUST00000077689 Dusp27Q148W8 1138 aa15.16■□□□□ 0.02
Ssh1-201ENSMUST00000077689 A2mQ6GQT1 1474 aa15.16■□□□□ 0.02
Ssh1-201ENSMUST00000077689 Ankrd36D3Z4K0 1415 aa15.14■□□□□ 0.01
Ssh1-201ENSMUST00000077689 Disp1Q3TDN0 1521 aa15.14■□□□□ 0.01
Ssh1-201ENSMUST00000077689 Ythdc1E9Q5K9 736 aaKnown RBP15.13■□□□□ 0.01
Ssh1-201ENSMUST00000077689 Tshz2Q68FE9 1030 aa15.12■□□□□ 0.01
Ssh1-201ENSMUST00000077689 Fam43aQ8BUP8 424 aa15.12■□□□□ 0.01
Ssh1-201ENSMUST00000077689 Gm13697A2AK42 830 aa15.12■□□□□ 0.01
Ssh1-201ENSMUST00000077689 Paxip1Q6NZQ4 1056 aa15.12■□□□□ 0.01
Ssh1-201ENSMUST00000077689 WrnO09053 1401 aa15.11■□□□□ 0.01
Ssh1-201ENSMUST00000077689 DekQ7TNV0 380 aaKnown RBP15.11■□□□□ 0.01
Ssh1-201ENSMUST00000077689 WizO88286 1684 aaKnown RBP15.09■□□□□ 0.01
Ssh1-201ENSMUST00000077689 Abca5Q8K448 1642 aa15.08■□□□□ 0
Ssh1-201ENSMUST00000077689 Cabp1Q9JLK7 227 aa15.08■□□□□ 0
Ssh1-201ENSMUST00000077689 Nkx1-2P42580 305 aa15.08■□□□□ 0
Ssh1-201ENSMUST00000077689 Irf5P56477 497 aa15.08■□□□□ 0
Ssh1-201ENSMUST00000077689 NexmifQ5DTT1 1515 aa15.07■□□□□ 0
Ssh1-201ENSMUST00000077689 UacaQ8CGB3 1411 aa15.07■□□□□ 0
Ssh1-201ENSMUST00000077689 PxdnQ3UQ28 1475 aa15.07■□□□□ 0
Ssh1-201ENSMUST00000077689 Soga1E1U8D0 1418 aa15.07■□□□□ 0
Ssh1-201ENSMUST00000077689 Spryd3E9Q9B3 442 aa15.07■□□□□ 0
Ssh1-201ENSMUST00000077689 Trim26Q99PN3 545 aa15.07■□□□□ 0
Ssh1-201ENSMUST00000077689 Mre11Q61216 706 aa15.06■□□□□ 0
Ssh1-201ENSMUST00000077689 Lmtk2Q3TYD6 1471 aa15.05■□□□□ 0
Ssh1-201ENSMUST00000077689 BC005561E9Q5E2 1589 aa15.05■□□□□ 0
Ssh1-201ENSMUST00000077689 Dhx30Q99PU8 1217 aaKnown RBP15.05■□□□□ -0
Ssh1-201ENSMUST00000077689 Mphosph9A6H5Y1 991 aa15.04■□□□□ -0
Ssh1-201ENSMUST00000077689 Phf14Q9D4H9 881 aa15.04■□□□□ -0
Ssh1-201ENSMUST00000077689 Tex2Q6ZPJ0 1128 aaKnown RBP15.04■□□□□ -0
Ssh1-201ENSMUST00000077689 Slc4a2P13808 1237 aaKnown RBP15.03■□□□□ -0
Ssh1-201ENSMUST00000077689 Dnai1Q8C0M8 701 aa15.03■□□□□ -0
Ssh1-201ENSMUST00000077689 Ift140E9PY46 1464 aa15.03■□□□□ -0
Ssh1-201ENSMUST00000077689 Cul9Q80TT8 1865 aa15.02■□□□□ -0
Ssh1-201ENSMUST00000077689 Adamts12Q811B3 1600 aa15.02□□□□□ -0.01
Ssh1-201ENSMUST00000077689 Pdlim2Q8R1G6 349 aa15.01□□□□□ -0.01
Ssh1-201ENSMUST00000077689 Nom1Q3UFM5 854 aaKnown RBP15□□□□□ -0.01
Ssh1-201ENSMUST00000077689 Wwc2Q6NXJ0 1187 aa15□□□□□ -0.01
Ssh1-201ENSMUST00000077689 Tnnt2P50752 301 aa14.99□□□□□ -0.01
Ssh1-201ENSMUST00000077689 Fkbp15Q6P9Q6 1216 aaKnown RBP14.99□□□□□ -0.01
Ssh1-201ENSMUST00000077689 Mug1P28665 1476 aa14.99□□□□□ -0.01
Ssh1-201ENSMUST00000077689 Kif20aP97329 887 aa14.99□□□□□ -0.01
Ssh1-201ENSMUST00000077689 PogkQ80TC5 607 aa14.99□□□□□ -0.01
Ssh1-201ENSMUST00000077689 Mtus2Q3UHD3 1353 aa14.98□□□□□ -0.01
Ssh1-201ENSMUST00000077689 Rrp12Q6P5B0 1295 aaKnown RBP14.98□□□□□ -0.01
Ssh1-201ENSMUST00000077689 Zfp644E9QA22 1323 aa14.98□□□□□ -0.01
Ssh1-201ENSMUST00000077689 Ncoa3O09000 1398 aa14.98□□□□□ -0.01
Ssh1-201ENSMUST00000077689 Plekhh2Q8C115 1491 aa14.97□□□□□ -0.01
Ssh1-201ENSMUST00000077689 Chmp4bQ9D8B3 224 aaKnown RBP14.97□□□□□ -0.01
Ssh1-201ENSMUST00000077689 Nup160Q9Z0W3 1402 aaKnown RBP14.97□□□□□ -0.01
Ssh1-201ENSMUST00000077689 Dennd4bQ3U1Y4 1499 aa14.96□□□□□ -0.01
Ssh1-201ENSMUST00000077689 Ofd1Q80Z25 1017 aa14.96□□□□□ -0.01
Ssh1-201ENSMUST00000077689 Pkd2O35245 966 aa14.95□□□□□ -0.02
Ssh1-201ENSMUST00000077689 L3mbtl2P59178 703 aa14.95□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms