RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Abca5Q8K448 1642 aa13.41□□□□□ -0.26
Ccdc40-202ENSMUST00000053440 Gm13695A2AK44 830 aa13.41□□□□□ -0.26
Ccdc40-202ENSMUST00000053440 Rgl3Q3UYI5 709 aa13.41□□□□□ -0.26
Ccdc40-202ENSMUST00000053440 Gcc2Q8CHG3 1679 aa13.41□□□□□ -0.26
Ccdc40-202ENSMUST00000053440 Abcc5Q9R1X5 1436 aa13.4□□□□□ -0.26
Ccdc40-202ENSMUST00000053440 Fam135aQ6NS59 1506 aa13.4□□□□□ -0.26
Ccdc40-202ENSMUST00000053440 Plekhh2Q8C115 1491 aa13.39□□□□□ -0.27
Ccdc40-202ENSMUST00000053440 Magi3Q9EQJ9 1476 aa13.39□□□□□ -0.27
Ccdc40-202ENSMUST00000053440 Rprd2Q6NXI6 1469 aaKnown RBP13.39□□□□□ -0.27
Ccdc40-202ENSMUST00000053440 WizO88286 1684 aaKnown RBP13.39□□□□□ -0.27
Ccdc40-202ENSMUST00000053440 Bcl11aQ9QYE3 773 aa13.38□□□□□ -0.27
Ccdc40-202ENSMUST00000053440 Grin2aP35436 1464 aa13.37□□□□□ -0.27
Ccdc40-202ENSMUST00000053440 WrnO09053 1401 aa13.37□□□□□ -0.27
Ccdc40-202ENSMUST00000053440 Mtus2Q3UHD3 1353 aa13.37□□□□□ -0.27
Ccdc40-202ENSMUST00000053440 Rfx7F8VPJ6 1459 aa13.37□□□□□ -0.27
Ccdc40-202ENSMUST00000053440 Setbp1Q9Z180 1582 aa13.36□□□□□ -0.27
Ccdc40-202ENSMUST00000053440 DiexfQ8BTT6 772 aaKnown RBP13.36□□□□□ -0.27
Ccdc40-202ENSMUST00000053440 Kif21aQ9QXL2 1672 aa13.36□□□□□ -0.27
Ccdc40-202ENSMUST00000053440 Arhgef40Q3UPH7 1517 aa13.36□□□□□ -0.27
Ccdc40-202ENSMUST00000053440 Slc4a3P16283 1227 aa13.35□□□□□ -0.27
Ccdc40-202ENSMUST00000053440 PxdnQ3UQ28 1475 aa13.35□□□□□ -0.27
Ccdc40-202ENSMUST00000053440 Ncoa3O09000 1398 aa13.35□□□□□ -0.27
Ccdc40-202ENSMUST00000053440 Pelp1Q9DBD5 1123 aaKnown RBP13.35□□□□□ -0.27
Ccdc40-202ENSMUST00000053440 Dhx9O70133 1380 aaKnown RBP13.34□□□□□ -0.27
Ccdc40-202ENSMUST00000053440 Pak3Q61036 559 aa13.34□□□□□ -0.27
Ccdc40-202ENSMUST00000053440 PnisrA2AJT4 805 aaKnown RBP13.33□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Rtl5Q5DTT4 599 aa13.33□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Kdm6bQ5NCY0 1641 aa13.33□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Plb1Q3TTY0 1478 aa13.33□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Ifnlr1Q8CGK5 535 aa13.33□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Rundc1Q0VDN7 615 aa13.32□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Arhgap27A2AB59 869 aa13.32□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Ofd1Q80Z25 1017 aa13.32□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Grwd1Q810D6 446 aaKnown RBP13.31□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Soga1E1U8D0 1418 aa13.31□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Trak1Q6PD31 939 aa13.3□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 SphkapQ6NSW3 1687 aa13.3□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Dapk1Q80YE7 1442 aa13.3□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Zbtb4Q5F293 982 aa13.3□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Pik3c2gO70167 1506 aa13.29□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Adgrb2Q8CGM1 1561 aa13.29□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Zbtb7cQ8VCZ7 619 aa13.29□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Adamts12Q811B3 1600 aa13.29□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Disp1Q3TDN0 1521 aa13.28□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Card11Q8CIS0 1159 aa13.28□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Ttll5Q8CHB8 1328 aa13.27□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Kcnh8P59111 1102 aa13.27□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Liat1Q810M6 228 aa13.27□□□□□ -0.28
Ccdc40-202ENSMUST00000053440 Cwc22Q8C5N3 908 aaKnown RBP13.26□□□□□ -0.29
Ccdc40-202ENSMUST00000053440 AlkP97793 1621 aa13.25□□□□□ -0.29
Ccdc40-202ENSMUST00000053440 Adcy10Q8C0T9 1614 aa13.24□□□□□ -0.29
Ccdc40-202ENSMUST00000053440 Kdm3bQ6ZPY7 1562 aa13.24□□□□□ -0.29
Ccdc40-202ENSMUST00000053440 Dhx57Q6P5D3 1388 aaKnown RBP13.24□□□□□ -0.29
Ccdc40-202ENSMUST00000053440 Cc2d2bA0A286YDU8 1405 aa13.24□□□□□ -0.29
Ccdc40-202ENSMUST00000053440 Mrc2Q64449 1479 aa13.24□□□□□ -0.29
Ccdc40-202ENSMUST00000053440 Rapgef6Q5NCJ1 1609 aa13.24□□□□□ -0.29
Ccdc40-202ENSMUST00000053440 Kif14L0N7N1 1674 aaKnown RBP13.23□□□□□ -0.29
Ccdc40-202ENSMUST00000053440 L3mbtl2P59178 703 aa13.23□□□□□ -0.29
Ccdc40-202ENSMUST00000053440 Fkbp15Q6P9Q6 1216 aaKnown RBP13.23□□□□□ -0.29
Ccdc40-202ENSMUST00000053440 Plekhg5Q66T02 1073 aa13.22□□□□□ -0.29
Ccdc40-202ENSMUST00000053440 Il16O54824 1322 aa13.22□□□□□ -0.29
Ccdc40-202ENSMUST00000053440 Mug2P28666 1451 aa13.22□□□□□ -0.29
Ccdc40-202ENSMUST00000053440 Abca16E9PWJ7 1678 aa13.21□□□□□ -0.29
Ccdc40-202ENSMUST00000053440 Ttbk1Q6PCN3 1308 aa13.21□□□□□ -0.3
Ccdc40-202ENSMUST00000053440 Tdrd9Q14BI7 1383 aa13.2□□□□□ -0.3
Ccdc40-202ENSMUST00000053440 Supt6hQ62383 1726 aaKnown RBP13.2□□□□□ -0.3
Ccdc40-202ENSMUST00000053440 Arhgap31A6X8Z5 1425 aa13.19□□□□□ -0.3
Ccdc40-202ENSMUST00000053440 Lamc1P02468 1607 aaKnown RBP13.19□□□□□ -0.3
Ccdc40-202ENSMUST00000053440 Egfem1Q8C088 590 aa13.19□□□□□ -0.3
Ccdc40-202ENSMUST00000053440 Setd1bQ8CFT2 1985 aa13.19□□□□□ -0.3
Ccdc40-202ENSMUST00000053440 Arhgef11Q68FM7 1552 aa13.18□□□□□ -0.3
Ccdc40-202ENSMUST00000053440 Nup155Q99P88 1391 aaKnown RBP13.18□□□□□ -0.3
Ccdc40-202ENSMUST00000053440 Cdk13Q69ZA1 1511 aaKnown RBP13.18□□□□□ -0.3
Ccdc40-202ENSMUST00000053440 Myom3A2ABU4 1439 aa13.18□□□□□ -0.3
Ccdc40-202ENSMUST00000053440 Map4P27546 1125 aaKnown RBP13.17□□□□□ -0.3
Ccdc40-202ENSMUST00000053440 Cdc42bpaQ3UU96 1719 aa13.17□□□□□ -0.3
Ccdc40-202ENSMUST00000053440 Mbd5B1AYB6 1498 aa13.17□□□□□ -0.3
Ccdc40-202ENSMUST00000053440 Naip6Q9JIB6 1403 aa13.17□□□□□ -0.3
Ccdc40-202ENSMUST00000053440 Arhgef12Q8R4H2 1543 aaKnown RBP13.16□□□□□ -0.3
Ccdc40-202ENSMUST00000053440 Wdr7Q920I9 1489 aa13.16□□□□□ -0.3
Ccdc40-202ENSMUST00000053440 Rad21Q61550 635 aaKnown RBP13.15□□□□□ -0.3
Ccdc40-202ENSMUST00000053440 Rpgrip1lQ8CG73 1264 aa13.15□□□□□ -0.3
Ccdc40-202ENSMUST00000053440 Map3k4O08648 1597 aa13.15□□□□□ -0.3
Ccdc40-202ENSMUST00000053440 Shroom2A2ALU4 1481 aa13.14□□□□□ -0.31
Ccdc40-202ENSMUST00000053440 Kif21bQ9QXL1 1668 aa13.14□□□□□ -0.31
Ccdc40-202ENSMUST00000053440 Kiaa1551Q5DTW7 1521 aa13.12□□□□□ -0.31
Ccdc40-202ENSMUST00000053440 Prex2Q3LAC4 1598 aa13.12□□□□□ -0.31
Ccdc40-202ENSMUST00000053440 Magi1Q6RHR9 1471 aa13.12□□□□□ -0.31
Ccdc40-202ENSMUST00000053440 Tcerg1Q8CGF7 1100 aaKnown RBP13.12□□□□□ -0.31
Ccdc40-202ENSMUST00000053440 Erbb3Q61526 1339 aa13.11□□□□□ -0.31
Ccdc40-202ENSMUST00000053440 Nup160Q9Z0W3 1402 aaKnown RBP13.11□□□□□ -0.31
Ccdc40-202ENSMUST00000053440 Q7TT23 1179 aa13.1□□□□□ -0.31
Ccdc40-202ENSMUST00000053440 Dnajc5bQ9CQ94 199 aa13.1□□□□□ -0.31
Ccdc40-202ENSMUST00000053440 Abcc2Q8VI47 1543 aa13.1□□□□□ -0.31
Ccdc40-202ENSMUST00000053440 RalgapbQ8BQZ4 1484 aa13.09□□□□□ -0.31
Ccdc40-202ENSMUST00000053440 Anp32bQ9EST5 272 aaKnown RBP13.09□□□□□ -0.31
Ccdc40-202ENSMUST00000053440 Zfp444Q3TDV8 331 aaKnown RBP13.08□□□□□ -0.32
Ccdc40-202ENSMUST00000053440 Rrp7aQ9D1C9 280 aaKnown RBP13.08□□□□□ -0.32
Ccdc40-202ENSMUST00000053440 Ccdc141E9Q8Q6 1531 aa13.07□□□□□ -0.32
Ccdc40-202ENSMUST00000053440 Zscan21Q07231 555 aa13.07□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms