RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 Ifnlr1Q8CGK5 535 aa12.12□□□□□ -0.47
Ptchd1-201ENSMUST00000038665 Ncoa2Q61026 1462 aa12.11□□□□□ -0.47
Ptchd1-201ENSMUST00000038665 Plekhh2Q8C115 1491 aa12.11□□□□□ -0.47
Ptchd1-201ENSMUST00000038665 Tdrd9Q14BI7 1383 aa12.11□□□□□ -0.47
Ptchd1-201ENSMUST00000038665 Ccdc141E9Q8Q6 1531 aa12.11□□□□□ -0.47
Ptchd1-201ENSMUST00000038665 Map3k4O08648 1597 aa12.11□□□□□ -0.47
Ptchd1-201ENSMUST00000038665 Dnmt1P13864 1620 aaKnown RBP12.11□□□□□ -0.47
Ptchd1-201ENSMUST00000038665 UacaQ8CGB3 1411 aa12.11□□□□□ -0.47
Ptchd1-201ENSMUST00000038665 Magi1Q6RHR9 1471 aa12.11□□□□□ -0.47
Ptchd1-201ENSMUST00000038665 Eif4g3Q80XI3 1579 aaKnown RBP12.1□□□□□ -0.47
Ptchd1-201ENSMUST00000038665 Ankrd36D3Z4K0 1415 aa12.1□□□□□ -0.47
Ptchd1-201ENSMUST00000038665 Jph4Q80WT0 628 aa12.1□□□□□ -0.47
Ptchd1-201ENSMUST00000038665 Mtus2Q3UHD3 1353 aa12.1□□□□□ -0.47
Ptchd1-201ENSMUST00000038665 Phf23Q8BSN5 401 aa12.1□□□□□ -0.47
Ptchd1-201ENSMUST00000038665 Kiaa1551Q5DTW7 1521 aa12.1□□□□□ -0.47
Ptchd1-201ENSMUST00000038665 Cdk11bP24788 784 aaKnown RBP12.09□□□□□ -0.47
Ptchd1-201ENSMUST00000038665 Ccer2J3QPU5 274 aa12.08□□□□□ -0.48
Ptchd1-201ENSMUST00000038665 Arhgef12Q8R4H2 1543 aaKnown RBP12.07□□□□□ -0.48
Ptchd1-201ENSMUST00000038665 Naip5Q9R016 1403 aa12.07□□□□□ -0.48
Ptchd1-201ENSMUST00000038665 Pkd2O35245 966 aa12.06□□□□□ -0.48
Ptchd1-201ENSMUST00000038665 Dhx9O70133 1380 aaKnown RBP12.04□□□□□ -0.48
Ptchd1-201ENSMUST00000038665 Fgd6Q69ZL1 1399 aa12.04□□□□□ -0.48
Ptchd1-201ENSMUST00000038665 Plppr3Q7TPB0 716 aa12.02□□□□□ -0.48
Ptchd1-201ENSMUST00000038665 Kdm3bQ6ZPY7 1562 aa12.02□□□□□ -0.49
Ptchd1-201ENSMUST00000038665 Mapkbp1Q6NS57 1503 aa12.02□□□□□ -0.49
Ptchd1-201ENSMUST00000038665 AlkP97793 1621 aa12.02□□□□□ -0.49
Ptchd1-201ENSMUST00000038665 Cul7Q8VE73 1689 aa12.02□□□□□ -0.49
Ptchd1-201ENSMUST00000038665 Usp47Q8BY87 1376 aa12.01□□□□□ -0.49
Ptchd1-201ENSMUST00000038665 Rfx7F8VPJ6 1459 aa12.01□□□□□ -0.49
Ptchd1-201ENSMUST00000038665 Ttll5Q8CHB8 1328 aa12□□□□□ -0.49
Ptchd1-201ENSMUST00000038665 Fam163aQ8CAA5 168 aa12□□□□□ -0.49
Ptchd1-201ENSMUST00000038665 Trak1Q6PD31 939 aa11.99□□□□□ -0.49
Ptchd1-201ENSMUST00000038665 Trappc8E9PWG2 1437 aa11.98□□□□□ -0.49
Ptchd1-201ENSMUST00000038665 Rgl3Q3UYI5 709 aa11.98□□□□□ -0.49
Ptchd1-201ENSMUST00000038665 Fhod3Q76LL6 1578 aa11.98□□□□□ -0.49
Ptchd1-201ENSMUST00000038665 Dhx57Q6P5D3 1388 aaKnown RBP11.98□□□□□ -0.49
Ptchd1-201ENSMUST00000038665 Gm14025A2AP89 1413 aa11.98□□□□□ -0.49
Ptchd1-201ENSMUST00000038665 Csrnp3P59055 597 aa11.97□□□□□ -0.49
Ptchd1-201ENSMUST00000038665 Setbp1Q9Z180 1582 aa11.97□□□□□ -0.49
Ptchd1-201ENSMUST00000038665 Supt6hQ62383 1726 aaKnown RBP11.97□□□□□ -0.49
Ptchd1-201ENSMUST00000038665 Znf608Q56A10 1511 aa11.97□□□□□ -0.49
Ptchd1-201ENSMUST00000038665 Fancd2Q80V62 1450 aa11.97□□□□□ -0.49
Ptchd1-201ENSMUST00000038665 Gm13697A2AK42 830 aa11.96□□□□□ -0.49
Ptchd1-201ENSMUST00000038665 Pelp1Q9DBD5 1123 aaKnown RBP11.96□□□□□ -0.49
Ptchd1-201ENSMUST00000038665 Anks4bQ8K3X6 423 aa11.96□□□□□ -0.5
Ptchd1-201ENSMUST00000038665 Il16O54824 1322 aa11.96□□□□□ -0.5
Ptchd1-201ENSMUST00000038665 Abcc1O35379 1528 aa11.95□□□□□ -0.5
Ptchd1-201ENSMUST00000038665 Rrp7aQ9D1C9 280 aaKnown RBP11.95□□□□□ -0.5
Ptchd1-201ENSMUST00000038665 Gm38655A0A286YDK6 273 aa11.94□□□□□ -0.5
Ptchd1-201ENSMUST00000038665 Arhgap5P97393 1501 aa11.94□□□□□ -0.5
Ptchd1-201ENSMUST00000038665 Sart1Q9Z315 806 aaKnown RBP11.92□□□□□ -0.5
Ptchd1-201ENSMUST00000038665 Rprd2Q6NXI6 1469 aaKnown RBP11.92□□□□□ -0.5
Ptchd1-201ENSMUST00000038665 Kif14L0N7N1 1674 aaKnown RBP11.92□□□□□ -0.5
Ptchd1-201ENSMUST00000038665 Mlh3A0A1Y7VMP7 1443 aa11.92□□□□□ -0.5
Ptchd1-201ENSMUST00000038665 Zbtb4Q5F293 982 aa11.92□□□□□ -0.5
Ptchd1-201ENSMUST00000038665 Rrbp1Q99PL5 1605 aaKnown RBP11.92□□□□□ -0.5
Ptchd1-201ENSMUST00000038665 Nup155Q99P88 1391 aaKnown RBP11.92□□□□□ -0.5
Ptchd1-201ENSMUST00000038665 Map4P27546 1125 aaKnown RBP11.91□□□□□ -0.5
Ptchd1-201ENSMUST00000038665 Grwd1Q810D6 446 aaKnown RBP11.91□□□□□ -0.5
Ptchd1-201ENSMUST00000038665 Fam208aQ69ZR9 1610 aaKnown RBP11.91□□□□□ -0.5
Ptchd1-201ENSMUST00000038665 Slc24a1Q91WD8 1130 aa11.91□□□□□ -0.5
Ptchd1-201ENSMUST00000038665 Arid3cA6PWV5 409 aa11.9□□□□□ -0.5
Ptchd1-201ENSMUST00000038665 Chd1P40201 1711 aa11.9□□□□□ -0.51
Ptchd1-201ENSMUST00000038665 Map3k5O35099 1380 aa11.89□□□□□ -0.51
Ptchd1-201ENSMUST00000038665 Hnrnpul2Q00PI9 745 aaKnown RBP11.89□□□□□ -0.51
Ptchd1-201ENSMUST00000038665 Asxl1P59598 1514 aa11.89□□□□□ -0.51
Ptchd1-201ENSMUST00000038665 Ssh2Q5SW75 1423 aa11.88□□□□□ -0.51
Ptchd1-201ENSMUST00000038665 Caskin1Q6P9K8 1431 aa11.88□□□□□ -0.51
Ptchd1-201ENSMUST00000038665 Pik3c2gO70167 1506 aa11.87□□□□□ -0.51
Ptchd1-201ENSMUST00000038665 Atp10dQ8K2X1 1416 aa11.86□□□□□ -0.51
Ptchd1-201ENSMUST00000038665 Gm32742A0A1B0GT42 1604 aa11.86□□□□□ -0.51
Ptchd1-201ENSMUST00000038665 Wdr7Q920I9 1489 aa11.85□□□□□ -0.51
Ptchd1-201ENSMUST00000038665 NhsB1AV60 1647 aa11.85□□□□□ -0.51
Ptchd1-201ENSMUST00000038665 Lamc1P02468 1607 aaKnown RBP11.85□□□□□ -0.51
Ptchd1-201ENSMUST00000038665 Ythdc2B2RR83 1445 aaKnown RBP11.84□□□□□ -0.51
Ptchd1-201ENSMUST00000038665 Camsap2Q8C1B1 1461 aa11.84□□□□□ -0.51
Ptchd1-201ENSMUST00000038665 PtprtQ99M80 1454 aa11.84□□□□□ -0.51
Ptchd1-201ENSMUST00000038665 Trpm2Q91YD4 1506 aa11.84□□□□□ -0.51
Ptchd1-201ENSMUST00000038665 Kif21bQ9QXL1 1668 aa11.84□□□□□ -0.51
Ptchd1-201ENSMUST00000038665 Fmn2Q9JL04 1578 aa11.84□□□□□ -0.51
Ptchd1-201ENSMUST00000038665 Cdk13Q69ZA1 1511 aaKnown RBP11.83□□□□□ -0.52
Ptchd1-201ENSMUST00000038665 Pprc1Q6NZN1 1644 aa11.82□□□□□ -0.52
Ptchd1-201ENSMUST00000038665 Rundc1Q0VDN7 615 aa11.81□□□□□ -0.52
Ptchd1-201ENSMUST00000038665 Mug2P28666 1451 aa11.8□□□□□ -0.52
Ptchd1-201ENSMUST00000038665 Lrrc9Q8CDN9 1456 aa11.8□□□□□ -0.52
Ptchd1-201ENSMUST00000038665 Dapk1Q80YE7 1442 aa11.79□□□□□ -0.52
Ptchd1-201ENSMUST00000038665 Rnf17Q99MV7 1640 aa11.79□□□□□ -0.52
Ptchd1-201ENSMUST00000038665 Cdc42bpbQ7TT50 1713 aa11.79□□□□□ -0.52
Ptchd1-201ENSMUST00000038665 Smg6P61406 1418 aaKnown RBP11.79□□□□□ -0.52
Ptchd1-201ENSMUST00000038665 Ncoa1P70365 1447 aa11.79□□□□□ -0.52
Ptchd1-201ENSMUST00000038665 Erich6D3Z6S9 713 aa11.79□□□□□ -0.52
Ptchd1-201ENSMUST00000038665 Wwc2Q6NXJ0 1187 aa11.78□□□□□ -0.52
Ptchd1-201ENSMUST00000038665 Washc2Q6PGL7 1334 aa11.77□□□□□ -0.52
Ptchd1-201ENSMUST00000038665 Dot1lQ6XZL8 1540 aa11.77□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 Cd109Q8R422 1442 aa11.77□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 Spag9Q58A65 1321 aaKnown RBP11.77□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 Atp7aQ64430 1491 aa11.77□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 Mbd5B1AYB6 1498 aa11.76□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 Abca8bQ8K440 1620 aa11.76□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 SafbD3YXK2 937 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms