RNA–Protein interactions for RNA: ENSMUST00000036229.12

Ctdp1-201, Transcript of RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdp1, Length 3,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1-201ENSMUST00000036229 NgefQ8CHT1 710 aa19.06■□□□□ 0.64
Ctdp1-201ENSMUST00000036229 Neurod2Q62414 383 aa19.06■□□□□ 0.64
Ctdp1-201ENSMUST00000036229 Gtf2a1Q99PM3 378 aa19.05■□□□□ 0.64
Ctdp1-201ENSMUST00000036229 NudcO35685 332 aaKnown RBP19.03■□□□□ 0.64
Ctdp1-201ENSMUST00000036229 PtprkP35822 1457 aa19.03■□□□□ 0.64
Ctdp1-201ENSMUST00000036229 Paxip1Q6NZQ4 1056 aa19.03■□□□□ 0.64
Ctdp1-201ENSMUST00000036229 Kcnn1Q9EQR3 537 aa19.03■□□□□ 0.64
Ctdp1-201ENSMUST00000036229 SlkO54988 1233 aa19.02■□□□□ 0.64
Ctdp1-201ENSMUST00000036229 Mre11Q61216 706 aa19.02■□□□□ 0.64
Ctdp1-201ENSMUST00000036229 Trim26Q99PN3 545 aa19.02■□□□□ 0.63
Ctdp1-201ENSMUST00000036229 Htatsf1Q8BGC0 757 aa19.01■□□□□ 0.63
Ctdp1-201ENSMUST00000036229 EspnQ9ET47 871 aa19.01■□□□□ 0.63
Ctdp1-201ENSMUST00000036229 CntlnA2AM05 1397 aa19■□□□□ 0.63
Ctdp1-201ENSMUST00000036229 Arhgap35Q91YM2 1499 aa18.99■□□□□ 0.63
Ctdp1-201ENSMUST00000036229 Wdr62Q3U3T8 1523 aa18.98■□□□□ 0.63
Ctdp1-201ENSMUST00000036229 PnisrA2AJT4 805 aaKnown RBP18.97■□□□□ 0.63
Ctdp1-201ENSMUST00000036229 Ccdc18Q640L5 1455 aa18.97■□□□□ 0.63
Ctdp1-201ENSMUST00000036229 Rbm10Q99KG3 930 aaKnown RBP18.96■□□□□ 0.63
Ctdp1-201ENSMUST00000036229 Rrp9Q91WM3 475 aaKnown RBP18.96■□□□□ 0.63
Ctdp1-201ENSMUST00000036229 Ak7Q9D2H2 614 aa18.95■□□□□ 0.62
Ctdp1-201ENSMUST00000036229 CrbnQ8C7D2 445 aa18.94■□□□□ 0.62
Ctdp1-201ENSMUST00000036229 Arap1Q4LDD4 1452 aa18.94■□□□□ 0.62
Ctdp1-201ENSMUST00000036229 Fkbp15Q6P9Q6 1216 aaKnown RBP18.92■□□□□ 0.62
Ctdp1-201ENSMUST00000036229 Card11Q8CIS0 1159 aa18.91■□□□□ 0.62
Ctdp1-201ENSMUST00000036229 Pkd2O35245 966 aa18.9■□□□□ 0.62
Ctdp1-201ENSMUST00000036229 Rundc1Q0VDN7 615 aa18.9■□□□□ 0.62
Ctdp1-201ENSMUST00000036229 Ipo8Q7TMY7 1010 aa18.9■□□□□ 0.62
Ctdp1-201ENSMUST00000036229 Mphosph9A6H5Y1 991 aa18.89■□□□□ 0.61
Ctdp1-201ENSMUST00000036229 Erich6bQ9D4S6 220 aa18.89■□□□□ 0.61
Ctdp1-201ENSMUST00000036229 Zfp444Q3TDV8 331 aaKnown RBP18.87■□□□□ 0.61
Ctdp1-201ENSMUST00000036229 Rpgrip1lQ8CG73 1264 aa18.87■□□□□ 0.61
Ctdp1-201ENSMUST00000036229 Prkrip1Q9CWV6 186 aaKnown RBP18.87■□□□□ 0.61
Ctdp1-201ENSMUST00000036229 Mia2Q91ZV0 1396 aa18.87■□□□□ 0.61
Ctdp1-201ENSMUST00000036229 Nkx1-2P42580 305 aa18.87■□□□□ 0.61
Ctdp1-201ENSMUST00000036229 Mak16Q8BGS0 296 aaKnown RBP18.86■□□□□ 0.61
Ctdp1-201ENSMUST00000036229 Zscan21Q07231 555 aa18.85■□□□□ 0.61
Ctdp1-201ENSMUST00000036229 Vgll3P85442 326 aa18.85■□□□□ 0.61
Ctdp1-201ENSMUST00000036229 Q7TT23 1179 aa18.85■□□□□ 0.61
Ctdp1-201ENSMUST00000036229 TimelessQ9R1X4 1197 aa18.85■□□□□ 0.61
Ctdp1-201ENSMUST00000036229 UacaQ8CGB3 1411 aa18.84■□□□□ 0.61
Ctdp1-201ENSMUST00000036229 Rwdd1Q9CQK7 243 aa18.84■□□□□ 0.61
Ctdp1-201ENSMUST00000036229 Rrp12Q6P5B0 1295 aaKnown RBP18.83■□□□□ 0.6
Ctdp1-201ENSMUST00000036229 Nlrp6Q91WS2 869 aa18.83■□□□□ 0.6
Ctdp1-201ENSMUST00000036229 Fhad1A6PWD2 1420 aa18.82■□□□□ 0.6
Ctdp1-201ENSMUST00000036229 Zfp91Q62511 572 aa18.81■□□□□ 0.6
Ctdp1-201ENSMUST00000036229 Shroom4Q1W617 1475 aa18.81■□□□□ 0.6
Ctdp1-201ENSMUST00000036229 Tnnt2P50752 301 aa18.81■□□□□ 0.6
Ctdp1-201ENSMUST00000036229 Stard8Q8K031 1019 aa18.81■□□□□ 0.6
Ctdp1-201ENSMUST00000036229 Os9Q8K2C7 672 aa18.81■□□□□ 0.6
Ctdp1-201ENSMUST00000036229 Esx1O88933 382 aa18.8■□□□□ 0.6
Ctdp1-201ENSMUST00000036229 Ecm2Q5FW85 670 aa18.8■□□□□ 0.6
Ctdp1-201ENSMUST00000036229 Dhx29Q6PGC1 1365 aaKnown RBP18.8■□□□□ 0.6
Ctdp1-201ENSMUST00000036229 Cux2P70298 1426 aa18.78■□□□□ 0.6
Ctdp1-201ENSMUST00000036229 Cluap1Q8R3P7 413 aa18.77■□□□□ 0.6
Ctdp1-201ENSMUST00000036229 TnnQ80Z71 1560 aa18.77■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Zfp644E9QA22 1323 aa18.76■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Phldb1Q6PDH0 1371 aaKnown RBP18.76■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Mfap1aC0HKD8 439 aaKnown RBP18.76■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Mfap1bC0HKD9 439 aaKnown RBP18.76■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 PtmaP26350 111 aa18.75■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Lamc3Q9R0B6 1581 aa18.75■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 KarsQ99MN1 595 aaKnown RBP18.75■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Arhgef5E9Q7D5 1581 aa18.75■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Dcaf11Q91VU6 549 aa18.75■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Aebp1Q640N1 1128 aa18.74■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Gtf3c5Q8R2T8 520 aa18.74■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Usp47Q8BY87 1376 aa18.74■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Erbb3Q61526 1339 aa18.74■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Pdia4P08003 638 aaKnown RBP18.73■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 NrkQ9R0G8 1455 aa18.73■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Fbxo2Q80UW2 297 aa18.73■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Speer4f1Q9D5Q6 258 aa18.73■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Naip1Q9QWK5 1403 aa18.73■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Cwc22Q8C5N3 908 aaKnown RBP18.72■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Fyco1Q8VDC1 1437 aa18.71■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Tnpo1Q8BFY9 898 aaKnown RBP18.71■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Rfx1P48377 963 aa18.71■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Plppr3Q7TPB0 716 aa18.71■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Cabp1Q9JLK7 227 aa18.71■□□□□ 0.59
Ctdp1-201ENSMUST00000036229 Unc13aQ4KUS2 1712 aa18.7■□□□□ 0.58
Ctdp1-201ENSMUST00000036229 Phf14Q9D4H9 881 aa18.69■□□□□ 0.58
Ctdp1-201ENSMUST00000036229 Ccdc183A2AJB1 534 aa18.69■□□□□ 0.58
Ctdp1-201ENSMUST00000036229 AqrQ8CFQ3 1481 aaKnown RBP18.68■□□□□ 0.58
Ctdp1-201ENSMUST00000036229 Camsap1A2AHC3 1581 aa18.68■□□□□ 0.58
Ctdp1-201ENSMUST00000036229 Rrp7aQ9D1C9 280 aaKnown RBP18.66■□□□□ 0.58
Ctdp1-201ENSMUST00000036229 Il4rP16382 810 aa18.65■□□□□ 0.58
Ctdp1-201ENSMUST00000036229 Carmil1Q6EDY6 1374 aa18.65■□□□□ 0.58
Ctdp1-201ENSMUST00000036229 Dusp27Q148W8 1138 aa18.64■□□□□ 0.57
Ctdp1-201ENSMUST00000036229 Grin2bQ01097 1482 aa18.64■□□□□ 0.57
Ctdp1-201ENSMUST00000036229 Ankrd36D3Z4K0 1415 aa18.64■□□□□ 0.57
Ctdp1-201ENSMUST00000036229 PogkQ80TC5 607 aa18.63■□□□□ 0.57
Ctdp1-201ENSMUST00000036229 Mroh2bQ7M6Y6 1581 aa18.63■□□□□ 0.57
Ctdp1-201ENSMUST00000036229 Erich6D3Z6S9 713 aa18.62■□□□□ 0.57
Ctdp1-201ENSMUST00000036229 Tiam1Q60610 1591 aa18.62■□□□□ 0.57
Ctdp1-201ENSMUST00000036229 Ssh1Q76I79 1042 aa18.62■□□□□ 0.57
Ctdp1-201ENSMUST00000036229 Tspyl2Q7TQI8 677 aa18.62■□□□□ 0.57
Ctdp1-201ENSMUST00000036229 VgfQ0VGU4 617 aa18.61■□□□□ 0.57
Ctdp1-201ENSMUST00000036229 Pank1Q8K4K6 548 aa18.61■□□□□ 0.57
Ctdp1-201ENSMUST00000036229 LrpprcQ6PB66 1392 aaKnown RBP18.61■□□□□ 0.57
Ctdp1-201ENSMUST00000036229 GorabQ8BRM2 368 aa18.6■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms