RNA–Protein interactions for RNA: ENSMUST00000029446.12

Csde1-201, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Csde1, Length 4,318 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-201ENSMUST00000029446 Zbtb7cQ8VCZ7 619 aa9.75□□□□□ -0.85
Csde1-201ENSMUST00000029446 Fgd6Q69ZL1 1399 aa9.75□□□□□ -0.85
Csde1-201ENSMUST00000029446 Anks4bQ8K3X6 423 aa9.74□□□□□ -0.85
Csde1-201ENSMUST00000029446 Cabp1Q9JLK7 227 aa9.74□□□□□ -0.85
Csde1-201ENSMUST00000029446 Mug1P28665 1476 aa9.73□□□□□ -0.85
Csde1-201ENSMUST00000029446 Ccdc141E9Q8Q6 1531 aa9.73□□□□□ -0.85
Csde1-201ENSMUST00000029446 Naip2Q9QUK4 1447 aa9.73□□□□□ -0.85
Csde1-201ENSMUST00000029446 3425401B19RikD3Z1D3 1412 aa9.73□□□□□ -0.85
Csde1-201ENSMUST00000029446 Gtf3c5Q8R2T8 520 aa9.72□□□□□ -0.85
Csde1-201ENSMUST00000029446 Ythdc1E9Q5K9 736 aaKnown RBP9.72□□□□□ -0.85
Csde1-201ENSMUST00000029446 Clstn2Q9ER65 966 aa9.71□□□□□ -0.85
Csde1-201ENSMUST00000029446 A2mQ6GQT1 1474 aa9.71□□□□□ -0.86
Csde1-201ENSMUST00000029446 Rusc2Q80U22 1514 aa9.71□□□□□ -0.86
Csde1-201ENSMUST00000029446 Rapgef6Q5NCJ1 1609 aa9.71□□□□□ -0.86
Csde1-201ENSMUST00000029446 Kcna4Q61423 654 aa9.71□□□□□ -0.86
Csde1-201ENSMUST00000029446 Shroom2A2ALU4 1481 aa9.71□□□□□ -0.86
Csde1-201ENSMUST00000029446 Fam163aQ8CAA5 168 aa9.7□□□□□ -0.86
Csde1-201ENSMUST00000029446 Lmtk2Q3TYD6 1471 aa9.7□□□□□ -0.86
Csde1-201ENSMUST00000029446 Hspa5P20029 655 aaKnown RBP9.7□□□□□ -0.86
Csde1-201ENSMUST00000029446 Ifnlr1Q8CGK5 535 aa9.7□□□□□ -0.86
Csde1-201ENSMUST00000029446 BC005561E9Q5E2 1589 aa9.7□□□□□ -0.86
Csde1-201ENSMUST00000029446 Abca16E9PWJ7 1678 aa9.69□□□□□ -0.86
Csde1-201ENSMUST00000029446 Mphosph9A6H5Y1 991 aa9.69□□□□□ -0.86
Csde1-201ENSMUST00000029446 BccipQ9CWI3 316 aa9.68□□□□□ -0.86
Csde1-201ENSMUST00000029446 Magi1Q6RHR9 1471 aa9.68□□□□□ -0.86
Csde1-201ENSMUST00000029446 Neo1P97798 1493 aa9.68□□□□□ -0.86
Csde1-201ENSMUST00000029446 Ncoa3O09000 1398 aa9.66□□□□□ -0.86
Csde1-201ENSMUST00000029446 Zbtb4Q5F293 982 aa9.66□□□□□ -0.86
Csde1-201ENSMUST00000029446 Hdac5Q9Z2V6 1113 aa9.66□□□□□ -0.86
Csde1-201ENSMUST00000029446 Rfx7F8VPJ6 1459 aa9.66□□□□□ -0.86
Csde1-201ENSMUST00000029446 Gm14025A2AP89 1413 aa9.66□□□□□ -0.86
Csde1-201ENSMUST00000029446 Podxl2Q8CAE9 603 aa9.66□□□□□ -0.86
Csde1-201ENSMUST00000029446 Eif4g3Q80XI3 1579 aaKnown RBP9.65□□□□□ -0.86
Csde1-201ENSMUST00000029446 Gcc2Q8CHG3 1679 aa9.65□□□□□ -0.87
Csde1-201ENSMUST00000029446 Pkd2O35245 966 aa9.65□□□□□ -0.87
Csde1-201ENSMUST00000029446 Tdrd9Q14BI7 1383 aa9.64□□□□□ -0.87
Csde1-201ENSMUST00000029446 Il16O54824 1322 aa9.64□□□□□ -0.87
Csde1-201ENSMUST00000029446 Kdm5bQ80Y84 1544 aa9.64□□□□□ -0.87
Csde1-201ENSMUST00000029446 Gm13697A2AK42 830 aa9.64□□□□□ -0.87
Csde1-201ENSMUST00000029446 ArxO35085 564 aa9.64□□□□□ -0.87
Csde1-201ENSMUST00000029446 Hnrnpul2Q00PI9 745 aaKnown RBP9.64□□□□□ -0.87
Csde1-201ENSMUST00000029446 Q8BT18 775 aa9.64□□□□□ -0.87
Csde1-201ENSMUST00000029446 Abcc5Q9R1X5 1436 aa9.63□□□□□ -0.87
Csde1-201ENSMUST00000029446 Rrp7aQ9D1C9 280 aaKnown RBP9.63□□□□□ -0.87
Csde1-201ENSMUST00000029446 Mlh3A0A1Y7VMP7 1443 aa9.62□□□□□ -0.87
Csde1-201ENSMUST00000029446 Abcc2Q8VI47 1543 aa9.61□□□□□ -0.87
Csde1-201ENSMUST00000029446 Caskin1Q6P9K8 1431 aa9.61□□□□□ -0.87
Csde1-201ENSMUST00000029446 Os9Q8K2C7 672 aa9.61□□□□□ -0.87
Csde1-201ENSMUST00000029446 Map3k4O08648 1597 aa9.61□□□□□ -0.87
Csde1-201ENSMUST00000029446 Fam71e1A1L3C1 212 aa9.61□□□□□ -0.87
Csde1-201ENSMUST00000029446 Anp32bQ9EST5 272 aaKnown RBP9.61□□□□□ -0.87
Csde1-201ENSMUST00000029446 Arhgef11Q68FM7 1552 aa9.6□□□□□ -0.87
Csde1-201ENSMUST00000029446 Map4P27546 1125 aaKnown RBP9.6□□□□□ -0.87
Csde1-201ENSMUST00000029446 Nup155Q99P88 1391 aaKnown RBP9.6□□□□□ -0.87
Csde1-201ENSMUST00000029446 Fancd2Q80V62 1450 aa9.59□□□□□ -0.87
Csde1-201ENSMUST00000029446 Arhgef12Q8R4H2 1543 aaKnown RBP9.58□□□□□ -0.88
Csde1-201ENSMUST00000029446 Rrbp1Q99PL5 1605 aaKnown RBP9.58□□□□□ -0.88
Csde1-201ENSMUST00000029446 Arhgap5P97393 1501 aa9.58□□□□□ -0.88
Csde1-201ENSMUST00000029446 Rgl3Q3UYI5 709 aa9.58□□□□□ -0.88
Csde1-201ENSMUST00000029446 Sart1Q9Z315 806 aaKnown RBP9.57□□□□□ -0.88
Csde1-201ENSMUST00000029446 Usp47Q8BY87 1376 aa9.57□□□□□ -0.88
Csde1-201ENSMUST00000029446 Prex2Q3LAC4 1598 aa9.57□□□□□ -0.88
Csde1-201ENSMUST00000029446 Trak1Q6PD31 939 aa9.57□□□□□ -0.88
Csde1-201ENSMUST00000029446 Taok2Q6ZQ29 1240 aa9.57□□□□□ -0.88
Csde1-201ENSMUST00000029446 Adcy10Q8C0T9 1614 aa9.56□□□□□ -0.88
Csde1-201ENSMUST00000029446 Setd1bQ8CFT2 1985 aa9.56□□□□□ -0.88
Csde1-201ENSMUST00000029446 Mapkbp1Q6NS57 1503 aa9.56□□□□□ -0.88
Csde1-201ENSMUST00000029446 Arhgef40Q3UPH7 1517 aa9.55□□□□□ -0.88
Csde1-201ENSMUST00000029446 Kiaa1551Q5DTW7 1521 aa9.55□□□□□ -0.88
Csde1-201ENSMUST00000029446 Zfp644E9QA22 1323 aa9.55□□□□□ -0.88
Csde1-201ENSMUST00000029446 Dnmt1P13864 1620 aaKnown RBP9.54□□□□□ -0.88
Csde1-201ENSMUST00000029446 Pabpn1Q8CCS6 302 aaKnown RBP9.54□□□□□ -0.88
Csde1-201ENSMUST00000029446 Igf1rQ60751 1373 aa9.53□□□□□ -0.88
Csde1-201ENSMUST00000029446 Abcc1O35379 1528 aa9.53□□□□□ -0.88
Csde1-201ENSMUST00000029446 NeflP08551 543 aa9.53□□□□□ -0.88
Csde1-201ENSMUST00000029446 Znf316Q6PGE4 1016 aa9.53□□□□□ -0.88
Csde1-201ENSMUST00000029446 Erich6D3Z6S9 713 aa9.52□□□□□ -0.88
Csde1-201ENSMUST00000029446 Cwc22Q8C5N3 908 aaKnown RBP9.52□□□□□ -0.88
Csde1-201ENSMUST00000029446 Arid3cA6PWV5 409 aa9.52□□□□□ -0.89
Csde1-201ENSMUST00000029446 Prdm16A2A935 1275 aa9.51□□□□□ -0.89
Csde1-201ENSMUST00000029446 Lemd3Q9WU40 921 aa9.51□□□□□ -0.89
Csde1-201ENSMUST00000029446 Kdm3bQ6ZPY7 1562 aa9.51□□□□□ -0.89
Csde1-201ENSMUST00000029446 Anp32aO35381 247 aa9.51□□□□□ -0.89
Csde1-201ENSMUST00000029446 Cdc42bpaQ3UU96 1719 aa9.5□□□□□ -0.89
Csde1-201ENSMUST00000029446 Mrs2Q5NCE8 434 aa9.5□□□□□ -0.89
Csde1-201ENSMUST00000029446 Camsap2Q8C1B1 1461 aa9.49□□□□□ -0.89
Csde1-201ENSMUST00000029446 Spag9Q58A65 1321 aaKnown RBP9.49□□□□□ -0.89
Csde1-201ENSMUST00000029446 Atp10dQ8K2X1 1416 aa9.49□□□□□ -0.89
Csde1-201ENSMUST00000029446 Naip5Q9R016 1403 aa9.49□□□□□ -0.89
Csde1-201ENSMUST00000029446 Card11Q8CIS0 1159 aa9.49□□□□□ -0.89
Csde1-201ENSMUST00000029446 Prdm10Q3UTQ7 1184 aa9.49□□□□□ -0.89
Csde1-201ENSMUST00000029446 Fhod3Q76LL6 1578 aa9.49□□□□□ -0.89
Csde1-201ENSMUST00000029446 Ttll5Q8CHB8 1328 aa9.49□□□□□ -0.89
Csde1-201ENSMUST00000029446 Mroh2aD3Z750 1679 aa9.48□□□□□ -0.89
Csde1-201ENSMUST00000029446 Grwd1Q810D6 446 aaKnown RBP9.48□□□□□ -0.89
Csde1-201ENSMUST00000029446 Wdr7Q920I9 1489 aa9.48□□□□□ -0.89
Csde1-201ENSMUST00000029446 Znf326O88291 580 aa9.47□□□□□ -0.89
Csde1-201ENSMUST00000029446 Sin3aQ60520 1274 aaKnown RBP9.47□□□□□ -0.89
Csde1-201ENSMUST00000029446 Rprd2Q6NXI6 1469 aaKnown RBP9.47□□□□□ -0.89
Csde1-201ENSMUST00000029446 Cfap74Q3UY96 1578 aa9.47□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms