RNA–Protein interactions for RNA: ENSMUST00000024620.6

Chd1-201, Transcript of Chromodomain-helicase-DNA-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Chd1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1-201ENSMUST00000024620 B4galnt3Q6L8S8 986 aa13.22□□□□□ -0.29
Chd1-201ENSMUST00000024620 1700019A02RikA0A087WPV9 146 aa13.21□□□□□ -0.3
Chd1-201ENSMUST00000024620 Baz1bQ9Z277 1479 aa13.19□□□□□ -0.3
Chd1-201ENSMUST00000024620 Aebp1Q640N1 1128 aa13.18□□□□□ -0.3
Chd1-201ENSMUST00000024620 Chrna2Q91X60 512 aa13.18□□□□□ -0.3
Chd1-201ENSMUST00000024620 Kcng1A2BDX4 514 aa13.17□□□□□ -0.3
Chd1-201ENSMUST00000024620 Chmp4bQ9D8B3 224 aaKnown RBP13.17□□□□□ -0.3
Chd1-201ENSMUST00000024620 PtmaP26350 111 aa13.16□□□□□ -0.3
Chd1-201ENSMUST00000024620 Efcab5A0JP43 1406 aa13.16□□□□□ -0.3
Chd1-201ENSMUST00000024620 Zbtb38Q3LR78 1197 aa13.15□□□□□ -0.3
Chd1-201ENSMUST00000024620 Arid4aF8VPQ2 1261 aaKnown RBP13.15□□□□□ -0.3
Chd1-201ENSMUST00000024620 Irf5P56477 497 aa13.15□□□□□ -0.3
Chd1-201ENSMUST00000024620 Kdm5bQ80Y84 1544 aa13.14□□□□□ -0.31
Chd1-201ENSMUST00000024620 Npm1Q61937 292 aaKnown RBP13.14□□□□□ -0.31
Chd1-201ENSMUST00000024620 Col17a1Q07563 1470 aa13.14□□□□□ -0.31
Chd1-201ENSMUST00000024620 Mre11Q61216 706 aa13.14□□□□□ -0.31
Chd1-201ENSMUST00000024620 Rb1cc1Q9ESK9 1588 aa13.13□□□□□ -0.31
Chd1-201ENSMUST00000024620 Baz1aO88379 1555 aa13.12□□□□□ -0.31
Chd1-201ENSMUST00000024620 Tpm2P58774 284 aa13.12□□□□□ -0.31
Chd1-201ENSMUST00000024620 Unc13aQ4KUS2 1712 aa13.12□□□□□ -0.31
Chd1-201ENSMUST00000024620 Shroom2A2ALU4 1481 aa13.11□□□□□ -0.31
Chd1-201ENSMUST00000024620 Smg6P61406 1418 aaKnown RBP13.11□□□□□ -0.31
Chd1-201ENSMUST00000024620 UacaQ8CGB3 1411 aa13.11□□□□□ -0.31
Chd1-201ENSMUST00000024620 Camsap2Q8C1B1 1461 aa13.1□□□□□ -0.31
Chd1-201ENSMUST00000024620 Fam43bA2AM80 330 aa13.09□□□□□ -0.31
Chd1-201ENSMUST00000024620 Lekr1B2RVN1 116 aa13.08□□□□□ -0.32
Chd1-201ENSMUST00000024620 Plcd3Q8K2J0 785 aa13.08□□□□□ -0.32
Chd1-201ENSMUST00000024620 Rrp12Q6P5B0 1295 aaKnown RBP13.08□□□□□ -0.32
Chd1-201ENSMUST00000024620 Psmd1Q3TXS7 953 aa13.08□□□□□ -0.32
Chd1-201ENSMUST00000024620 Clcn1Q64347 994 aa13.06□□□□□ -0.32
Chd1-201ENSMUST00000024620 Nkx1-2P42580 305 aa13.04□□□□□ -0.32
Chd1-201ENSMUST00000024620 Dmrt2Q8BG36 561 aa13.04□□□□□ -0.32
Chd1-201ENSMUST00000024620 Ccdc96Q9CR92 584 aa13.04□□□□□ -0.32
Chd1-201ENSMUST00000024620 CadpsQ80TJ1 1355 aa13.04□□□□□ -0.32
Chd1-201ENSMUST00000024620 Riok3Q9DBU3 519 aaKnown RBP13.03□□□□□ -0.32
Chd1-201ENSMUST00000024620 Sparcl1P70663 650 aa13.03□□□□□ -0.32
Chd1-201ENSMUST00000024620 WdpcpQ8C456 722 aa13.01□□□□□ -0.33
Chd1-201ENSMUST00000024620 Ncoa2Q61026 1462 aa13.01□□□□□ -0.33
Chd1-201ENSMUST00000024620 EspnQ9ET47 871 aa13.01□□□□□ -0.33
Chd1-201ENSMUST00000024620 Rbm25B2RY56 838 aaKnown RBP13□□□□□ -0.33
Chd1-201ENSMUST00000024620 Trim26Q99PN3 545 aa13□□□□□ -0.33
Chd1-201ENSMUST00000024620 TnikP83510 1323 aa13□□□□□ -0.33
Chd1-201ENSMUST00000024620 Erich6D3Z6S9 713 aa13□□□□□ -0.33
Chd1-201ENSMUST00000024620 Chrm1P12657 460 aa12.99□□□□□ -0.33
Chd1-201ENSMUST00000024620 Tnnt2P50752 301 aa12.99□□□□□ -0.33
Chd1-201ENSMUST00000024620 Hs6st3Q9QYK4 470 aa12.99□□□□□ -0.33
Chd1-201ENSMUST00000024620 TchhA0A0B4J1F9 1599 aa12.99□□□□□ -0.33
Chd1-201ENSMUST00000024620 Cep162Q6ZQ06 1403 aa12.98□□□□□ -0.33
Chd1-201ENSMUST00000024620 Noc3lQ8VI84 807 aaKnown RBP12.98□□□□□ -0.33
Chd1-201ENSMUST00000024620 Gab3Q8BSM5 595 aa12.96□□□□□ -0.33
Chd1-201ENSMUST00000024620 E2f4Q8R0K9 410 aa12.96□□□□□ -0.33
Chd1-201ENSMUST00000024620 PogkQ80TC5 607 aa12.95□□□□□ -0.34
Chd1-201ENSMUST00000024620 Rab11fip3Q8CHD8 1047 aa12.95□□□□□ -0.34
Chd1-201ENSMUST00000024620 Smarca2Q6DIC0 1577 aa12.95□□□□□ -0.34
Chd1-201ENSMUST00000024620 Ccdc88bQ4QRL3 1481 aa12.95□□□□□ -0.34
Chd1-201ENSMUST00000024620 Rapgef2Q8CHG7 1496 aa12.95□□□□□ -0.34
Chd1-201ENSMUST00000024620 Atad2bE9Q166 1460 aaKnown RBP12.94□□□□□ -0.34
Chd1-201ENSMUST00000024620 Dhx30Q99PU8 1217 aaKnown RBP12.94□□□□□ -0.34
Chd1-201ENSMUST00000024620 Nlrp6Q91WS2 869 aa12.93□□□□□ -0.34
Chd1-201ENSMUST00000024620 Ercc6F8VPZ5 1481 aa12.92□□□□□ -0.34
Chd1-201ENSMUST00000024620 Ddrgk1Q80WW9 315 aa12.92□□□□□ -0.34
Chd1-201ENSMUST00000024620 Tmem132aQ922P8 1018 aa12.9□□□□□ -0.34
Chd1-201ENSMUST00000024620 Zmym3Q9JLM4 1370 aa12.9□□□□□ -0.34
Chd1-201ENSMUST00000024620 Fyco1Q8VDC1 1437 aa12.9□□□□□ -0.35
Chd1-201ENSMUST00000024620 Crybg2B7ZCC2 1516 aa12.89□□□□□ -0.35
Chd1-201ENSMUST00000024620 Mroh3A0A1D5RM54 893 aa12.89□□□□□ -0.35
Chd1-201ENSMUST00000024620 Arhgap27A2AB59 869 aa12.89□□□□□ -0.35
Chd1-201ENSMUST00000024620 Hmgb1P63158 215 aaKnown RBP12.89□□□□□ -0.35
Chd1-201ENSMUST00000024620 Zbtb4Q5F293 982 aa12.89□□□□□ -0.35
Chd1-201ENSMUST00000024620 Ppm1gQ61074 542 aa12.89□□□□□ -0.35
Chd1-201ENSMUST00000024620 Htatsf1Q8BGC0 757 aa12.88□□□□□ -0.35
Chd1-201ENSMUST00000024620 Paxip1Q6NZQ4 1056 aa12.88□□□□□ -0.35
Chd1-201ENSMUST00000024620 Golga3P55937 1487 aa12.88□□□□□ -0.35
Chd1-201ENSMUST00000024620 Camsap1A2AHC3 1581 aa12.88□□□□□ -0.35
Chd1-201ENSMUST00000024620 Isy1Q69ZQ2 285 aaKnown RBP12.87□□□□□ -0.35
Chd1-201ENSMUST00000024620 Phf23Q8BSN5 401 aa12.87□□□□□ -0.35
Chd1-201ENSMUST00000024620 Sart3Q9JLI8 962 aaKnown RBP12.87□□□□□ -0.35
Chd1-201ENSMUST00000024620 Dnai1Q8C0M8 701 aa12.87□□□□□ -0.35
Chd1-201ENSMUST00000024620 Tmc1Q8R4P5 757 aa12.86□□□□□ -0.35
Chd1-201ENSMUST00000024620 CanxP35564 591 aaKnown RBP12.85□□□□□ -0.35
Chd1-201ENSMUST00000024620 EprsQ8CGC7 1512 aaKnown RBP12.85□□□□□ -0.35
Chd1-201ENSMUST00000024620 Dnajc14Q921R4 703 aa12.84□□□□□ -0.35
Chd1-201ENSMUST00000024620 Gse1Q3U3C9 1213 aa12.84□□□□□ -0.35
Chd1-201ENSMUST00000024620 Wwc1Q5SXA9 1104 aa12.84□□□□□ -0.35
Chd1-201ENSMUST00000024620 Prkrip1Q9CWV6 186 aaKnown RBP12.83□□□□□ -0.36
Chd1-201ENSMUST00000024620 Sh3bp5Q9Z131 463 aa12.82□□□□□ -0.36
Chd1-201ENSMUST00000024620 Ankrd36D3Z4K0 1415 aa12.82□□□□□ -0.36
Chd1-201ENSMUST00000024620 VgfQ0VGU4 617 aa12.81□□□□□ -0.36
Chd1-201ENSMUST00000024620 Pdcl2Q78Y63 240 aa12.81□□□□□ -0.36
Chd1-201ENSMUST00000024620 FanciQ8K368 1330 aa12.81□□□□□ -0.36
Chd1-201ENSMUST00000024620 Mkrn3Q60764 544 aa12.81□□□□□ -0.36
Chd1-201ENSMUST00000024620 Slc4a3P16283 1227 aa12.8□□□□□ -0.36
Chd1-201ENSMUST00000024620 Ncoa4Q5U4H9 625 aa12.8□□□□□ -0.36
Chd1-201ENSMUST00000024620 Eea1Q8BL66 1411 aa12.8□□□□□ -0.36
Chd1-201ENSMUST00000024620 Cttnbp2B9EJA2 1648 aa12.8□□□□□ -0.36
Chd1-201ENSMUST00000024620 Kdm2aP59997 1161 aa12.79□□□□□ -0.36
Chd1-201ENSMUST00000024620 Ripk4Q9ERK0 786 aa12.78□□□□□ -0.36
Chd1-201ENSMUST00000024620 Mrc2Q64449 1479 aa12.78□□□□□ -0.36
Chd1-201ENSMUST00000024620 Stac3Q8BZ71 360 aa12.77□□□□□ -0.36
Chd1-201ENSMUST00000024620 Gm13695A2AK44 830 aa12.77□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms