RNA–Protein interactions for RNA: ENSMUST00000023154.2

Cldn1-201, Transcript of Claudin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldn1, Length 3,247 nt, Biotype protein coding, Subcellular localisation Tight Junction .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1-201ENSMUST00000023154 AknaQ80VW7 1404 aa13.21□□□□□ -0.29
Cldn1-201ENSMUST00000023154 Ncoa2Q61026 1462 aa13.21□□□□□ -0.29
Cldn1-201ENSMUST00000023154 Fhod3Q76LL6 1578 aa13.21□□□□□ -0.29
Cldn1-201ENSMUST00000023154 Ube2uB1AUC4 352 aa13.21□□□□□ -0.29
Cldn1-201ENSMUST00000023154 Plekhh2Q8C115 1491 aa13.2□□□□□ -0.3
Cldn1-201ENSMUST00000023154 Fkbp15Q6P9Q6 1216 aaKnown RBP13.2□□□□□ -0.3
Cldn1-201ENSMUST00000023154 Rfx7F8VPJ6 1459 aa13.19□□□□□ -0.3
Cldn1-201ENSMUST00000023154 Mapkbp1Q6NS57 1503 aa13.19□□□□□ -0.3
Cldn1-201ENSMUST00000023154 Jph4Q80WT0 628 aa13.18□□□□□ -0.3
Cldn1-201ENSMUST00000023154 Zfp644E9QA22 1323 aa13.18□□□□□ -0.3
Cldn1-201ENSMUST00000023154 Fgd6Q69ZL1 1399 aa13.18□□□□□ -0.3
Cldn1-201ENSMUST00000023154 Adgrb2Q8CGM1 1561 aa13.16□□□□□ -0.3
Cldn1-201ENSMUST00000023154 Rrbp1Q99PL5 1605 aaKnown RBP13.16□□□□□ -0.3
Cldn1-201ENSMUST00000023154 Fam163aQ8CAA5 168 aa13.15□□□□□ -0.3
Cldn1-201ENSMUST00000023154 Dhx57Q6P5D3 1388 aaKnown RBP13.15□□□□□ -0.3
Cldn1-201ENSMUST00000023154 Kdm3bQ6ZPY7 1562 aa13.15□□□□□ -0.3
Cldn1-201ENSMUST00000023154 Mtus2Q3UHD3 1353 aa13.15□□□□□ -0.3
Cldn1-201ENSMUST00000023154 Mphosph9A6H5Y1 991 aa13.14□□□□□ -0.31
Cldn1-201ENSMUST00000023154 Setbp1Q9Z180 1582 aa13.14□□□□□ -0.31
Cldn1-201ENSMUST00000023154 NclP09405 707 aaKnown RBP13.13□□□□□ -0.31
Cldn1-201ENSMUST00000023154 Tdrd9Q14BI7 1383 aa13.12□□□□□ -0.31
Cldn1-201ENSMUST00000023154 Naip5Q9R016 1403 aa13.11□□□□□ -0.31
Cldn1-201ENSMUST00000023154 Fancd2Q80V62 1450 aa13.11□□□□□ -0.31
Cldn1-201ENSMUST00000023154 AlkP97793 1621 aa13.1□□□□□ -0.31
Cldn1-201ENSMUST00000023154 Chd1P40201 1711 aa13.1□□□□□ -0.31
Cldn1-201ENSMUST00000023154 Fam208aQ69ZR9 1610 aaKnown RBP13.1□□□□□ -0.31
Cldn1-201ENSMUST00000023154 Il16O54824 1322 aa13.1□□□□□ -0.31
Cldn1-201ENSMUST00000023154 Gm14025A2AP89 1413 aa13.09□□□□□ -0.31
Cldn1-201ENSMUST00000023154 Mlh3A0A1Y7VMP7 1443 aa13.08□□□□□ -0.31
Cldn1-201ENSMUST00000023154 Nop58Q6DFW4 536 aaKnown RBP13.08□□□□□ -0.32
Cldn1-201ENSMUST00000023154 Abcc1O35379 1528 aa13.08□□□□□ -0.32
Cldn1-201ENSMUST00000023154 Mapk8ip2Q9ERE9 830 aa13.07□□□□□ -0.32
Cldn1-201ENSMUST00000023154 Cdk11bP24788 784 aaKnown RBP13.06□□□□□ -0.32
Cldn1-201ENSMUST00000023154 Caskin1Q6P9K8 1431 aa13.06□□□□□ -0.32
Cldn1-201ENSMUST00000023154 Kif21bQ9QXL1 1668 aa13.05□□□□□ -0.32
Cldn1-201ENSMUST00000023154 Supt6hQ62383 1726 aaKnown RBP13.05□□□□□ -0.32
Cldn1-201ENSMUST00000023154 Lamc1P02468 1607 aaKnown RBP13.04□□□□□ -0.32
Cldn1-201ENSMUST00000023154 Pkd2O35245 966 aa13.04□□□□□ -0.32
Cldn1-201ENSMUST00000023154 NhsB1AV60 1647 aa13.03□□□□□ -0.32
Cldn1-201ENSMUST00000023154 Camsap2Q8C1B1 1461 aa13.03□□□□□ -0.32
Cldn1-201ENSMUST00000023154 Usp47Q8BY87 1376 aa13.01□□□□□ -0.33
Cldn1-201ENSMUST00000023154 Gm32742A0A1B0GT42 1604 aa13.01□□□□□ -0.33
Cldn1-201ENSMUST00000023154 Rprd2Q6NXI6 1469 aaKnown RBP13.01□□□□□ -0.33
Cldn1-201ENSMUST00000023154 Arhgap5P97393 1501 aa13□□□□□ -0.33
Cldn1-201ENSMUST00000023154 Trappc8E9PWG2 1437 aa13□□□□□ -0.33
Cldn1-201ENSMUST00000023154 Rnf17Q99MV7 1640 aa13□□□□□ -0.33
Cldn1-201ENSMUST00000023154 Ttll5Q8CHB8 1328 aa13□□□□□ -0.33
Cldn1-201ENSMUST00000023154 Fmn2Q9JL04 1578 aa12.99□□□□□ -0.33
Cldn1-201ENSMUST00000023154 Gm13697A2AK42 830 aa12.99□□□□□ -0.33
Cldn1-201ENSMUST00000023154 Sin3aQ60520 1274 aaKnown RBP12.99□□□□□ -0.33
Cldn1-201ENSMUST00000023154 Trpm2Q91YD4 1506 aa12.99□□□□□ -0.33
Cldn1-201ENSMUST00000023154 Anks4bQ8K3X6 423 aa12.99□□□□□ -0.33
Cldn1-201ENSMUST00000023154 Dhx9O70133 1380 aaKnown RBP12.98□□□□□ -0.33
Cldn1-201ENSMUST00000023154 Znf608Q56A10 1511 aa12.98□□□□□ -0.33
Cldn1-201ENSMUST00000023154 Kif14L0N7N1 1674 aaKnown RBP12.97□□□□□ -0.33
Cldn1-201ENSMUST00000023154 Pik3c2gO70167 1506 aa12.96□□□□□ -0.33
Cldn1-201ENSMUST00000023154 Kiaa1210E9Q0C6 1637 aa12.96□□□□□ -0.33
Cldn1-201ENSMUST00000023154 Csrnp3P59055 597 aa12.95□□□□□ -0.34
Cldn1-201ENSMUST00000023154 Abca8bQ8K440 1620 aa12.95□□□□□ -0.34
Cldn1-201ENSMUST00000023154 Pdcd11Q6NS46 1862 aaKnown RBP12.95□□□□□ -0.34
Cldn1-201ENSMUST00000023154 Nup155Q99P88 1391 aaKnown RBP12.94□□□□□ -0.34
Cldn1-201ENSMUST00000023154 Trak1Q6PD31 939 aa12.94□□□□□ -0.34
Cldn1-201ENSMUST00000023154 Atp10dQ8K2X1 1416 aa12.94□□□□□ -0.34
Cldn1-201ENSMUST00000023154 Pprc1Q6NZN1 1644 aa12.93□□□□□ -0.34
Cldn1-201ENSMUST00000023154 Ifnlr1Q8CGK5 535 aa12.93□□□□□ -0.34
Cldn1-201ENSMUST00000023154 Ssh2Q5SW75 1423 aa12.93□□□□□ -0.34
Cldn1-201ENSMUST00000023154 Asxl1P59598 1514 aa12.93□□□□□ -0.34
Cldn1-201ENSMUST00000023154 Cdc42bpbQ7TT50 1713 aa12.92□□□□□ -0.34
Cldn1-201ENSMUST00000023154 Adgrl2Q8JZZ7 1487 aa12.92□□□□□ -0.34
Cldn1-201ENSMUST00000023154 Sart1Q9Z315 806 aaKnown RBP12.92□□□□□ -0.34
Cldn1-201ENSMUST00000023154 Ythdc2B2RR83 1445 aaKnown RBP12.91□□□□□ -0.34
Cldn1-201ENSMUST00000023154 Zbtb7cQ8VCZ7 619 aa12.91□□□□□ -0.34
Cldn1-201ENSMUST00000023154 Rrp7aQ9D1C9 280 aaKnown RBP12.91□□□□□ -0.34
Cldn1-201ENSMUST00000023154 Lrrc9Q8CDN9 1456 aa12.91□□□□□ -0.34
Cldn1-201ENSMUST00000023154 Wdr7Q920I9 1489 aa12.91□□□□□ -0.34
Cldn1-201ENSMUST00000023154 Mast1Q9R1L5 1570 aa12.91□□□□□ -0.34
Cldn1-201ENSMUST00000023154 PtprtQ99M80 1454 aa12.9□□□□□ -0.34
Cldn1-201ENSMUST00000023154 Cfap74Q3UY96 1578 aa12.9□□□□□ -0.34
Cldn1-201ENSMUST00000023154 Map4P27546 1125 aaKnown RBP12.9□□□□□ -0.34
Cldn1-201ENSMUST00000023154 Abcc3B2RX12 1523 aa12.89□□□□□ -0.35
Cldn1-201ENSMUST00000023154 Pelp1Q9DBD5 1123 aaKnown RBP12.88□□□□□ -0.35
Cldn1-201ENSMUST00000023154 Hecw1Q8K4P8 1604 aa12.87□□□□□ -0.35
Cldn1-201ENSMUST00000023154 Kidins220E9Q9B7 1793 aa12.87□□□□□ -0.35
Cldn1-201ENSMUST00000023154 Rgl3Q3UYI5 709 aa12.87□□□□□ -0.35
Cldn1-201ENSMUST00000023154 Mbd5B1AYB6 1498 aa12.85□□□□□ -0.35
Cldn1-201ENSMUST00000023154 Neurl4Q5NCX5 1563 aa12.85□□□□□ -0.35
Cldn1-201ENSMUST00000023154 Dot1lQ6XZL8 1540 aa12.84□□□□□ -0.35
Cldn1-201ENSMUST00000023154 PtprgQ05909 1442 aa12.84□□□□□ -0.35
Cldn1-201ENSMUST00000023154 Gapvd1Q6PAR5 1458 aa12.84□□□□□ -0.35
Cldn1-201ENSMUST00000023154 Map3k5O35099 1380 aa12.83□□□□□ -0.36
Cldn1-201ENSMUST00000023154 Igf1rQ60751 1373 aa12.83□□□□□ -0.36
Cldn1-201ENSMUST00000023154 Mug2P28666 1451 aa12.83□□□□□ -0.36
Cldn1-201ENSMUST00000023154 Ncoa1P70365 1447 aa12.82□□□□□ -0.36
Cldn1-201ENSMUST00000023154 AI481877A2ALV5 1481 aa12.82□□□□□ -0.36
Cldn1-201ENSMUST00000023154 Zfyve16Q80U44 1528 aa12.81□□□□□ -0.36
Cldn1-201ENSMUST00000023154 Cdk13Q69ZA1 1511 aaKnown RBP12.81□□□□□ -0.36
Cldn1-201ENSMUST00000023154 Abca9Q8K449 1623 aa12.81□□□□□ -0.36
Cldn1-201ENSMUST00000023154 Arid3cA6PWV5 409 aa12.81□□□□□ -0.36
Cldn1-201ENSMUST00000023154 1700123L14RikQ3V2K7 440 aa12.8□□□□□ -0.36
Cldn1-201ENSMUST00000023154 Xrn1P97789 1719 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms