RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Setbp1Q9Z180 1582 aa16.45■□□□□ 0.22
Trim23-201ENSMUST00000022225 Pdlim2Q8R1G6 349 aa16.44■□□□□ 0.22
Trim23-201ENSMUST00000022225 TnikP83510 1323 aa16.44■□□□□ 0.22
Trim23-201ENSMUST00000022225 Prkrip1Q9CWV6 186 aaKnown RBP16.44■□□□□ 0.22
Trim23-201ENSMUST00000022225 NeflP08551 543 aa16.42■□□□□ 0.22
Trim23-201ENSMUST00000022225 Gtf2a1Q99PM3 378 aa16.42■□□□□ 0.22
Trim23-201ENSMUST00000022225 Sart3Q9JLI8 962 aaKnown RBP16.41■□□□□ 0.22
Trim23-201ENSMUST00000022225 Cux1P53564 1515 aa16.4■□□□□ 0.22
Trim23-201ENSMUST00000022225 CanxP35564 591 aaKnown RBP16.4■□□□□ 0.22
Trim23-201ENSMUST00000022225 Gm1043A0A140LJC2 1431 aa16.38■□□□□ 0.21
Trim23-201ENSMUST00000022225 Ttll13A4Q9F6 804 aa16.38■□□□□ 0.21
Trim23-201ENSMUST00000022225 Mre11Q61216 706 aa16.38■□□□□ 0.21
Trim23-201ENSMUST00000022225 SynmQ70IV5 1561 aa16.38■□□□□ 0.21
Trim23-201ENSMUST00000022225 Lamc3Q9R0B6 1581 aa16.38■□□□□ 0.21
Trim23-201ENSMUST00000022225 Plekhg5Q66T02 1073 aa16.37■□□□□ 0.21
Trim23-201ENSMUST00000022225 Ube2uB1AUC4 352 aa16.37■□□□□ 0.21
Trim23-201ENSMUST00000022225 Mphosph9A6H5Y1 991 aa16.36■□□□□ 0.21
Trim23-201ENSMUST00000022225 AampJ3QN89 436 aa16.35■□□□□ 0.21
Trim23-201ENSMUST00000022225 Abca5Q8K448 1642 aa16.35■□□□□ 0.21
Trim23-201ENSMUST00000022225 Rprd2Q6NXI6 1469 aaKnown RBP16.34■□□□□ 0.21
Trim23-201ENSMUST00000022225 Myom3A2ABU4 1439 aa16.33■□□□□ 0.2
Trim23-201ENSMUST00000022225 Grin2bQ01097 1482 aa16.33■□□□□ 0.2
Trim23-201ENSMUST00000022225 Usp47Q8BY87 1376 aa16.33■□□□□ 0.2
Trim23-201ENSMUST00000022225 Urb2E9Q7L1 1524 aaKnown RBP16.32■□□□□ 0.2
Trim23-201ENSMUST00000022225 Arhgef12Q8R4H2 1543 aaKnown RBP16.32■□□□□ 0.2
Trim23-201ENSMUST00000022225 Dnai1Q8C0M8 701 aa16.31■□□□□ 0.2
Trim23-201ENSMUST00000022225 AU015836B2RUM3 263 aa16.31■□□□□ 0.2
Trim23-201ENSMUST00000022225 Rrp9Q91WM3 475 aaKnown RBP16.31■□□□□ 0.2
Trim23-201ENSMUST00000022225 Mroh3A0A1D5RM54 893 aa16.3■□□□□ 0.2
Trim23-201ENSMUST00000022225 Chic2Q9D9G3 165 aa16.3■□□□□ 0.2
Trim23-201ENSMUST00000022225 Carmil1Q6EDY6 1374 aa16.28■□□□□ 0.2
Trim23-201ENSMUST00000022225 Mug1P28665 1476 aa16.27■□□□□ 0.2
Trim23-201ENSMUST00000022225 Rtn4Q99P72 1162 aaKnown RBP16.27■□□□□ 0.19
Trim23-201ENSMUST00000022225 Anp32bQ9EST5 272 aaKnown RBP16.27■□□□□ 0.19
Trim23-201ENSMUST00000022225 Zfp444Q3TDV8 331 aaKnown RBP16.26■□□□□ 0.19
Trim23-201ENSMUST00000022225 Cwc22Q8C5N3 908 aaKnown RBP16.26■□□□□ 0.19
Trim23-201ENSMUST00000022225 Rock2P70336 1388 aa16.26■□□□□ 0.19
Trim23-201ENSMUST00000022225 DmtnQ9WV69 405 aa16.25■□□□□ 0.19
Trim23-201ENSMUST00000022225 Dhx57Q6P5D3 1388 aaKnown RBP16.25■□□□□ 0.19
Trim23-201ENSMUST00000022225 Kif21bQ9QXL1 1668 aa16.25■□□□□ 0.19
Trim23-201ENSMUST00000022225 NudcO35685 332 aaKnown RBP16.24■□□□□ 0.19
Trim23-201ENSMUST00000022225 Lmtk2Q3TYD6 1471 aa16.23■□□□□ 0.19
Trim23-201ENSMUST00000022225 Zfp777B9EKF4 885 aa16.23■□□□□ 0.19
Trim23-201ENSMUST00000022225 Ccnb3Q810T2 1396 aa16.23■□□□□ 0.19
Trim23-201ENSMUST00000022225 Pkd2O35245 966 aa16.23■□□□□ 0.19
Trim23-201ENSMUST00000022225 Ppm1gQ61074 542 aa16.23■□□□□ 0.19
Trim23-201ENSMUST00000022225 Znf692Q3U381 531 aa16.22■□□□□ 0.19
Trim23-201ENSMUST00000022225 Aebp1Q640N1 1128 aa16.22■□□□□ 0.19
Trim23-201ENSMUST00000022225 B4galnt3Q6L8S8 986 aa16.22■□□□□ 0.19
Trim23-201ENSMUST00000022225 Kdm2bQ6P1G2 1309 aa16.21■□□□□ 0.19
Trim23-201ENSMUST00000022225 Pik3c2gO70167 1506 aa16.21■□□□□ 0.18
Trim23-201ENSMUST00000022225 Rfx7F8VPJ6 1459 aa16.21■□□□□ 0.18
Trim23-201ENSMUST00000022225 Mbd5B1AYB6 1498 aa16.2■□□□□ 0.18
Trim23-201ENSMUST00000022225 NgefQ8CHT1 710 aa16.2■□□□□ 0.18
Trim23-201ENSMUST00000022225 Atad2bE9Q166 1460 aaKnown RBP16.19■□□□□ 0.18
Trim23-201ENSMUST00000022225 Naip6Q9JIB6 1403 aa16.19■□□□□ 0.18
Trim23-201ENSMUST00000022225 Kif15Q6P9L6 1387 aa16.19■□□□□ 0.18
Trim23-201ENSMUST00000022225 Dnttip2Q8R2M2 758 aaKnown RBP16.19■□□□□ 0.18
Trim23-201ENSMUST00000022225 EspnQ9ET47 871 aa16.18■□□□□ 0.18
Trim23-201ENSMUST00000022225 Mbd3Q9Z2D8 285 aaKnown RBP16.18■□□□□ 0.18
Trim23-201ENSMUST00000022225 Ak9G3UYQ4 1894 aa16.17■□□□□ 0.18
Trim23-201ENSMUST00000022225 Dapk1Q80YE7 1442 aa16.16■□□□□ 0.18
Trim23-201ENSMUST00000022225 Mak16Q8BGS0 296 aaKnown RBP16.15■□□□□ 0.18
Trim23-201ENSMUST00000022225 Taok2Q6ZQ29 1240 aa16.15■□□□□ 0.18
Trim23-201ENSMUST00000022225 Zmym3Q9JLM4 1370 aa16.15■□□□□ 0.18
Trim23-201ENSMUST00000022225 Rpgrip1lQ8CG73 1264 aa16.14■□□□□ 0.17
Trim23-201ENSMUST00000022225 Phf14Q9D4H9 881 aa16.14■□□□□ 0.17
Trim23-201ENSMUST00000022225 Mtus2Q3UHD3 1353 aa16.13■□□□□ 0.17
Trim23-201ENSMUST00000022225 Kif20aP97329 887 aa16.13■□□□□ 0.17
Trim23-201ENSMUST00000022225 Ift140E9PY46 1464 aa16.12■□□□□ 0.17
Trim23-201ENSMUST00000022225 Ttc41Q692V3 1318 aa16.12■□□□□ 0.17
Trim23-201ENSMUST00000022225 Zscan21Q07231 555 aa16.12■□□□□ 0.17
Trim23-201ENSMUST00000022225 Dbr1Q923B1 550 aa16.11■□□□□ 0.17
Trim23-201ENSMUST00000022225 Frmpd1A2AKB4 1549 aa16.11■□□□□ 0.17
Trim23-201ENSMUST00000022225 Gcc2Q8CHG3 1679 aa16.11■□□□□ 0.17
Trim23-201ENSMUST00000022225 Lamc1P02468 1607 aaKnown RBP16.11■□□□□ 0.17
Trim23-201ENSMUST00000022225 Mug2P28666 1451 aa16.11■□□□□ 0.17
Trim23-201ENSMUST00000022225 Zfp644E9QA22 1323 aa16.1■□□□□ 0.17
Trim23-201ENSMUST00000022225 Rundc1Q0VDN7 615 aa16.1■□□□□ 0.17
Trim23-201ENSMUST00000022225 Eif2s2Q99L45 331 aaKnown RBP16.1■□□□□ 0.17
Trim23-201ENSMUST00000022225 Zbtb4Q5F293 982 aa16.09■□□□□ 0.17
Trim23-201ENSMUST00000022225 Chmp5Q9D7S9 219 aa16.09■□□□□ 0.17
Trim23-201ENSMUST00000022225 4933402E13RikQ9D4D2 429 aa16.09■□□□□ 0.17
Trim23-201ENSMUST00000022225 Ppp1r9bQ6R891 817 aaKnown RBP16.07■□□□□ 0.16
Trim23-201ENSMUST00000022225 Tmc1Q8R4P5 757 aa16.07■□□□□ 0.16
Trim23-201ENSMUST00000022225 Htatsf1Q8BGC0 757 aa16.06■□□□□ 0.16
Trim23-201ENSMUST00000022225 Kif14L0N7N1 1674 aaKnown RBP16.06■□□□□ 0.16
Trim23-201ENSMUST00000022225 Smc5Q8CG46 1101 aaKnown RBP16.06■□□□□ 0.16
Trim23-201ENSMUST00000022225 Zmym4A2A791 1549 aaKnown RBP16.06■□□□□ 0.16
Trim23-201ENSMUST00000022225 Wdr62Q3U3T8 1523 aa16.05■□□□□ 0.16
Trim23-201ENSMUST00000022225 Rad21Q61550 635 aaKnown RBP16.05■□□□□ 0.16
Trim23-201ENSMUST00000022225 Card11Q8CIS0 1159 aa16.05■□□□□ 0.16
Trim23-201ENSMUST00000022225 Ipo8Q7TMY7 1010 aa16.04■□□□□ 0.16
Trim23-201ENSMUST00000022225 Cabp1Q9JLK7 227 aa16.04■□□□□ 0.16
Trim23-201ENSMUST00000022225 Zbtb7cQ8VCZ7 619 aa16.03■□□□□ 0.16
Trim23-201ENSMUST00000022225 Polr1aO35134 1717 aaKnown RBP16.03■□□□□ 0.16
Trim23-201ENSMUST00000022225 Q7TT23 1179 aa16.03■□□□□ 0.16
Trim23-201ENSMUST00000022225 Ak7Q9D2H2 614 aa16.02■□□□□ 0.16
Trim23-201ENSMUST00000022225 Map3k4O08648 1597 aa16.02■□□□□ 0.15
Trim23-201ENSMUST00000022225 Kif21aQ9QXL2 1672 aa16.01■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms