RNA–Protein interactions for RNA: YPR184W

GDB1, Transcript of Glycogen debranching enzyme, yeast

Gene GDB1, Length 4,611 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDB1	YPR184W	SHY1	P53266	389 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	NRK1	P53915	240 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	UBP2	Q01476	1272 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	KAP95	Q06142	861 aa	Known RBP	4.96	□□□□□ -1.62
GDB1	YPR184W	YPR084W	Q06821	456 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	SYT1	Q06836	1226 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	LUC7	Q07508	261 aa	Predicted RBP	4.96	□□□□□ -1.62
GDB1	YPR184W	YDL121C	Q07541	149 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	YPR089W	O13585	888 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	HTA1	P04911	132 aa	Known RBP	4.95	□□□□□ -1.62
GDB1	YPR184W	HTA2	P04912	132 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	SPO7	P18410	259 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	ARF2	P19146	181 aa	Known RBP	4.95	□□□□□ -1.62
GDB1	YPR184W	CHL1	P22516	861 aa	Predicted RBP	4.95	□□□□□ -1.62
GDB1	YPR184W	OXP1	P28273	1286 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	NEM1	P38757	446 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	YAR028W	P39548	234 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	RBG1	P39729	369 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
GDB1	YPR184W	YNR061C	P53747	219 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	BOP3	P53958	396 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	GIP3	Q03016	1276 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	XYL2	Q07993	356 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	ARG4	P04076	463 aa	Predicted RBP	4.95	□□□□□ -1.62
GDB1	YPR184W	MRP13	P12686	339 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	SEC2	P17065	759 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	UGA1	P17649	471 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	AAT2	P23542	418 aa	Known RBP	4.95	□□□□□ -1.62
GDB1	YPR184W	YBL010C	P32788	280 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	SCD5	P34758	872 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	ECM13	P38195	257 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	MTW1	P39731	289 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	LYS12	P40495	371 aa	Known RBP	4.95	□□□□□ -1.62
GDB1	YPR184W	SNL1	P40548	159 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	MRX6	P48564	524 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	KIN4	Q01919	800 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	VHS1	Q03785	461 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	GPI17	Q04080	534 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	YLR446W	Q06204	433 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	FEX2	Q08991	375 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	CTF3	Q12748	733 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	YBL113C	Q7M4S9	792 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	TYR1	P20049	452 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	ATP11	P32453	318 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	PIM1	P36775	1133 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	MPS2	P53159	387 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	BIO4	P53630	237 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	EFR3	Q03653	782 aa	Known RBP	4.95	□□□□□ -1.62
GDB1	YPR184W	SNX41	Q04053	625 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
GDB1	YPR184W	RRP42	Q12277	265 aa	Predicted RBP	4.95	□□□□□ -1.62
GDB1	YPR184W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
GDB1	YPR184W	KTR3	P38130	404 aa	Predicted RBP	4.95	□□□□□ -1.62
GDB1	YPR184W	NIT2	P47016	307 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	YJR141W	P47172	347 aa	Predicted RBP	4.95	□□□□□ -1.62
GDB1	YPR184W	PPT1	P53043	513 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	STR3	P53101	465 aa	Known RBP	4.95	□□□□□ -1.62
GDB1	YPR184W	GYP1	Q08484	637 aa		4.95	□□□□□ -1.62
GDB1	YPR184W	PDA1	P16387	420 aa	Known RBP	4.94	□□□□□ -1.62
GDB1	YPR184W	KAR9	P32526	644 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	MUD2	P36084	527 aa	Known RBP	4.94	□□□□□ -1.62
GDB1	YPR184W	MRPL36	P36531	177 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	POL12	P38121	705 aa	Predicted RBP	4.94	□□□□□ -1.62
GDB1	YPR184W	TSC10	P38342	320 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	RIM4	P38741	713 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	YHR122W	P38829	231 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	END3	P39013	349 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	GVP36	P40531	326 aa	Known RBP	4.94	□□□□□ -1.62
GDB1	YPR184W	YGL176C	P46945	554 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	POL31	P46957	487 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	CCT8	P47079	568 aa	Known RBP	4.94	□□□□□ -1.62
GDB1	YPR184W	ASN2	P49090	572 aa	Known RBP	4.94	□□□□□ -1.62
GDB1	YPR184W	FLC3	P53121	802 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	TLG1	Q03322	224 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	ADE13	Q05911	482 aa	Known RBP	4.94	□□□□□ -1.62
GDB1	YPR184W	YKL033W-A	Q86ZR7	236 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	YEL076C-A	P0CX16	216 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	YLR464W	P0CX17	216 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	RSC6	P25632	483 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	PRP21	P32524	280 aa	Predicted RBP	4.94	□□□□□ -1.62
GDB1	YPR184W	SNU114	P36048	1008 aa	Known RBP	4.94	□□□□□ -1.62
GDB1	YPR184W	YEL076C	P39971	216 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	MGS1	P40151	587 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	YIR016W	P40572	265 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	MSS2	P40990	351 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	POP1	P41812	875 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	VID22	Q05934	901 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	DIC1	Q06143	298 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	VAM6	Q07468	1049 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	PSY3	Q12318	242 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	MPD2	Q99316	277 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	HOP1	P20050	605 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	AFG1	P32317	509 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	SKN1	P33336	771 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	BUR6	P40096	142 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	MTM1	P53320	366 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	HDA1	P53973	706 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	MUK1	Q02866	612 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	INP2	Q03824	705 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	YET3	Q07451	203 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms