RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W HNT2P49775 206 aa2.09□□□□□ -2.07
SIR4YDR227W YGR283CP53336 341 aaPredicted RBP2.09□□□□□ -2.07
SIR4YDR227W SIW14P53965 281 aa2.09□□□□□ -2.07
SIR4YDR227W YMR187CQ03236 431 aa2.09□□□□□ -2.07
SIR4YDR227W YDR209CQ03480 137 aa2.09□□□□□ -2.07
SIR4YDR227W SIZ1Q04195 904 aa2.09□□□□□ -2.07
SIR4YDR227W EMI2Q04409 500 aaKnown RBP2.09□□□□□ -2.07
SIR4YDR227W DBP9Q06218 594 aaKnown RBP2.09□□□□□ -2.07
SIR4YDR227W YIG1Q08956 461 aa2.09□□□□□ -2.07
SIR4YDR227W YLR149CQ99296 730 aa2.09□□□□□ -2.07
SIR4YDR227W HSF1P10961 833 aa2.09□□□□□ -2.07
SIR4YDR227W RNR1P21524 888 aaKnown RBP2.09□□□□□ -2.07
SIR4YDR227W HIR2P32480 875 aa2.09□□□□□ -2.07
SIR4YDR227W HBS1P32769 611 aaKnown RBP2.09□□□□□ -2.07
SIR4YDR227W SKG6P32900 734 aaPredicted RBP2.09□□□□□ -2.07
SIR4YDR227W YKL023WP36103 277 aaKnown RBP2.09□□□□□ -2.07
SIR4YDR227W SHE3P38272 425 aaKnown RBP2.09□□□□□ -2.07
SIR4YDR227W PRM9P39551 298 aa2.09□□□□□ -2.07
SIR4YDR227W PRP39P39682 629 aaKnown RBP2.09□□□□□ -2.07
SIR4YDR227W YEL057CP39983 233 aa2.09□□□□□ -2.07
SIR4YDR227W GIM4P40005 111 aaKnown RBP2.09□□□□□ -2.07
SIR4YDR227W VFA1P40080 203 aa2.09□□□□□ -2.07
SIR4YDR227W IST3P40565 148 aaPredicted RBP2.09□□□□□ -2.07
SIR4YDR227W IDS2P46958 469 aa2.09□□□□□ -2.07
SIR4YDR227W RAD17P48581 401 aa2.09□□□□□ -2.07
SIR4YDR227W EXG2P52911 562 aa2.09□□□□□ -2.07
SIR4YDR227W ROG1P53118 685 aa2.09□□□□□ -2.07
SIR4YDR227W DRN1P53255 507 aaKnown RBP2.09□□□□□ -2.07
SIR4YDR227W ALG11P53954 548 aaKnown RBP2.09□□□□□ -2.07
SIR4YDR227W TAF3Q12297 353 aa2.09□□□□□ -2.07
SIR4YDR227W PSY3Q12318 242 aa2.09□□□□□ -2.07
SIR4YDR227W PNS1Q12412 539 aa2.09□□□□□ -2.07
SIR4YDR227W RRP36Q12481 300 aaPredicted RBP2.09□□□□□ -2.07
SIR4YDR227W MRP1P10662 321 aaKnown RBP2.09□□□□□ -2.08
SIR4YDR227W DEG1P31115 442 aaKnown RBP2.09□□□□□ -2.08
SIR4YDR227W KNS1P32350 737 aaPredicted RBP2.09□□□□□ -2.08
SIR4YDR227W PRS1P32895 427 aaKnown RBP2.09□□□□□ -2.08
SIR4YDR227W MRT4P33201 236 aaKnown RBP2.09□□□□□ -2.08
SIR4YDR227W MSG5P38590 489 aa2.09□□□□□ -2.08
SIR4YDR227W FMP52P40008 231 aa2.09□□□□□ -2.08
SIR4YDR227W YIR014WP40570 242 aa2.09□□□□□ -2.08
SIR4YDR227W MAL11P53048 616 aa2.09□□□□□ -2.08
SIR4YDR227W YGL159WP53110 370 aa2.09□□□□□ -2.08
SIR4YDR227W YGL138CP53122 345 aa2.09□□□□□ -2.08
SIR4YDR227W DCP2P53550 970 aaKnown RBP2.09□□□□□ -2.08
SIR4YDR227W RSM24Q03976 319 aa2.09□□□□□ -2.08
SIR4YDR227W DIS3Q08162 1001 aaKnown RBP2.09□□□□□ -2.08
SIR4YDR227W OSW2Q12202 724 aa2.09□□□□□ -2.08
SIR4YDR227W NHP6BP11633 99 aaKnown RBP2.08□□□□□ -2.08
SIR4YDR227W ABF1P14164 731 aa2.08□□□□□ -2.08
SIR4YDR227W THR4P16120 514 aaKnown RBP2.08□□□□□ -2.08
SIR4YDR227W UBC1P21734 215 aaKnown RBP2.08□□□□□ -2.08
SIR4YDR227W CIN8P27895 1000 aa2.08□□□□□ -2.08
SIR4YDR227W HXT1P32465 570 aa2.08□□□□□ -2.08
SIR4YDR227W AST1P35183 429 aa2.08□□□□□ -2.08
SIR4YDR227W CBT1P36038 271 aaPredicted RBP2.08□□□□□ -2.08
SIR4YDR227W ADD66P36040 267 aa2.08□□□□□ -2.08
SIR4YDR227W TDA11P38854 504 aa2.08□□□□□ -2.08
SIR4YDR227W SKN7P38889 622 aa2.08□□□□□ -2.08
SIR4YDR227W GLO1P50107 326 aa2.08□□□□□ -2.08
SIR4YDR227W RMR1P53060 241 aa2.08□□□□□ -2.08
SIR4YDR227W GRS2Q06817 618 aa2.08□□□□□ -2.08
SIR4YDR227W SCM3Q12334 223 aa2.08□□□□□ -2.08
SIR4YDR227W MDM12Q92328 271 aa2.08□□□□□ -2.08
SIR4YDR227W TUB2P02557 457 aaKnown RBP2.08□□□□□ -2.08
SIR4YDR227W SAM1P10659 382 aaKnown RBP2.08□□□□□ -2.08
SIR4YDR227W FBA1P14540 359 aaKnown RBP2.08□□□□□ -2.08
SIR4YDR227W PRP16P15938 1071 aaPredicted RBP2.08□□□□□ -2.08
SIR4YDR227W ADK2P26364 225 aa2.08□□□□□ -2.08
SIR4YDR227W HMX1P32339 317 aa2.08□□□□□ -2.08
SIR4YDR227W RIM1P32445 135 aaKnown RBP2.08□□□□□ -2.08
SIR4YDR227W HEL1P36113 551 aa2.08□□□□□ -2.08
SIR4YDR227W OPY1P38271 328 aa2.08□□□□□ -2.08
SIR4YDR227W YBR138CP38277 524 aa2.08□□□□□ -2.08
SIR4YDR227W OSH3P38713 996 aaKnown RBP2.08□□□□□ -2.08
SIR4YDR227W MGS1P40151 587 aa2.08□□□□□ -2.08
SIR4YDR227W SHE4P51534 789 aa2.08□□□□□ -2.08
SIR4YDR227W MND1P53102 219 aa2.08□□□□□ -2.08
SIR4YDR227W FLC3P53121 802 aa2.08□□□□□ -2.08
SIR4YDR227W YPL108WQ02872 168 aaPredicted RBP2.08□□□□□ -2.08
SIR4YDR227W HAS1Q03532 505 aaKnown RBP2.08□□□□□ -2.08
SIR4YDR227W SMA2Q04658 369 aa2.08□□□□□ -2.08
SIR4YDR227W YLR345WQ06137 509 aa2.08□□□□□ -2.08
SIR4YDR227W CMS1Q07897 291 aaKnown RBP2.08□□□□□ -2.08
SIR4YDR227W TFB5Q3E7C1 72 aaPredicted RBP2.08□□□□□ -2.08
SIR4YDR227W RPS17AP02407 136 aaKnown RBP2.08□□□□□ -2.08
SIR4YDR227W RPL4AP10664 362 aaKnown RBP2.08□□□□□ -2.08
SIR4YDR227W HEM13P11353 328 aaKnown RBP2.08□□□□□ -2.08
SIR4YDR227W RNA1P11745 407 aaKnown RBP2.08□□□□□ -2.08
SIR4YDR227W RPS17BP14127 136 aaKnown RBP2.08□□□□□ -2.08
SIR4YDR227W PDA1P16387 420 aaKnown RBP2.08□□□□□ -2.08
SIR4YDR227W SEN2P16658 377 aa2.08□□□□□ -2.08
SIR4YDR227W KGD1P20967 1014 aaKnown RBP2.08□□□□□ -2.08
SIR4YDR227W GSY2P27472 705 aa2.08□□□□□ -2.08
SIR4YDR227W GAC1P28006 793 aa2.08□□□□□ -2.08
SIR4YDR227W PAD1P33751 242 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
SIR4YDR227W SNU114P36048 1008 aaKnown RBP2.08□□□□□ -2.08
SIR4YDR227W RRT2P38332 387 aa2.08□□□□□ -2.08
SIR4YDR227W MPT5P39016 859 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
SIR4YDR227W HXT16P47185 567 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms