RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 YPT32P51996 222 aaKnown RBP8.52□□□□□ -1.05
LSR1LSR1 HXT15P54854 567 aa8.52□□□□□ -1.05
LSR1LSR1 RSN1Q03516 953 aa8.52□□□□□ -1.05
LSR1LSR1 GPI17Q04080 534 aa8.52□□□□□ -1.05
LSR1LSR1 ERB1Q04660 807 aaKnown RBP8.52□□□□□ -1.05
LSR1LSR1 YLR012CQ07927 99 aa8.52□□□□□ -1.05
LSR1LSR1 RSB1Q08417 382 aa8.52□□□□□ -1.05
LSR1LSR1 MRP13P12686 339 aa8.51□□□□□ -1.05
LSR1LSR1 IDI1P15496 288 aa8.51□□□□□ -1.05
LSR1LSR1 MRPL8P22353 238 aa8.51□□□□□ -1.05
LSR1LSR1 ITR2P30606 609 aa8.51□□□□□ -1.05
LSR1LSR1 HBS1P32769 611 aaKnown RBP8.51□□□□□ -1.05
LSR1LSR1 SPC34P36131 295 aa8.51□□□□□ -1.05
LSR1LSR1 ECM8P38246 354 aa8.51□□□□□ -1.05
LSR1LSR1 EGD2P38879 174 aaKnown RBP8.51□□□□□ -1.05
LSR1LSR1 UPF3P48412 387 aaKnown RBP8.51□□□□□ -1.05
LSR1LSR1 ORM1P53224 222 aa8.51□□□□□ -1.05
LSR1LSR1 YNR068CP53754 272 aa8.51□□□□□ -1.05
LSR1LSR1 IPI3P53877 555 aa8.51□□□□□ -1.05
LSR1LSR1 ECM11Q04110 302 aa8.51□□□□□ -1.05
LSR1LSR1 YHC1Q05900 231 aaKnown RBP8.51□□□□□ -1.05
LSR1LSR1 YLL032CQ07834 825 aaKnown RBP RIP-Chip data8.51□□□□□ -1.05not detected
LSR1LSR1 HRK1Q08732 759 aaKnown RBP8.51□□□□□ -1.05
LSR1LSR1 YOR387CQ08910 206 aa8.51□□□□□ -1.05
LSR1LSR1 MRN1Q08925 612 aaKnown RBP RIP-Chip data8.51□□□□□ -1.05not detected
LSR1LSR1 RSA1Q08932 381 aa8.51□□□□□ -1.05
LSR1LSR1 MLH3Q12083 715 aa8.51□□□□□ -1.05
LSR1LSR1 TOM1Q03280 3268 aa8.5□□□□□ -1.05
LSR1LSR1 RAD7P06779 565 aa8.5□□□□□ -1.05
LSR1LSR1 KGD2P19262 463 aaPredicted RBP8.5□□□□□ -1.05
LSR1LSR1 PEX3P28795 441 aa8.5□□□□□ -1.05
LSR1LSR1 RIB1P38066 345 aa8.5□□□□□ -1.05
LSR1LSR1 KRE29P40026 464 aa8.5□□□□□ -1.05
LSR1LSR1 RGI1P40043 161 aaPredicted RBP8.5□□□□□ -1.05
LSR1LSR1 GAT1P43574 510 aa8.5□□□□□ -1.05
LSR1LSR1 EMI1Q04406 187 aa8.5□□□□□ -1.05
LSR1LSR1 URC2Q04411 772 aa8.5□□□□□ -1.05
LSR1LSR1 IRC10Q08118 586 aa8.5□□□□□ -1.05
LSR1LSR1 NTG2Q08214 380 aa8.5□□□□□ -1.05
LSR1LSR1 NDJ1Q12366 352 aa8.5□□□□□ -1.05
LSR1LSR1 PRC1P00729 532 aa8.49□□□□□ -1.05
LSR1LSR1 SCH9P11792 824 aaKnown RBP8.49□□□□□ -1.05
LSR1LSR1 MIH1P23748 554 aa8.49□□□□□ -1.05
LSR1LSR1 ARP2P32381 391 aaKnown RBP8.49□□□□□ -1.05
LSR1LSR1 SCD5P34758 872 aa8.49□□□□□ -1.05
LSR1LSR1 YPK3P38070 525 aa8.49□□□□□ -1.05
LSR1LSR1 YBR139WP38109 508 aa8.49□□□□□ -1.05
LSR1LSR1 SSZ1P38788 538 aaKnown RBP8.49□□□□□ -1.05
LSR1LSR1 RSP5P39940 809 aaKnown RBP8.49□□□□□ -1.05
LSR1LSR1 SYG1P40528 902 aa8.49□□□□□ -1.05
LSR1LSR1 UFE1P41834 346 aa8.49□□□□□ -1.05
LSR1LSR1 GLG2P47011 380 aa8.49□□□□□ -1.05
LSR1LSR1 CSN12P47130 423 aa8.49□□□□□ -1.05
LSR1LSR1 GTO1P48239 356 aa8.49□□□□□ -1.05
LSR1LSR1 COQ6P53318 479 aa8.49□□□□□ -1.05
LSR1LSR1 PEX13P80667 386 aa8.49□□□□□ -1.05
LSR1LSR1 SWP1Q02795 286 aa8.49□□□□□ -1.05
LSR1LSR1 TLG1Q03322 224 aa8.49□□□□□ -1.05
LSR1LSR1 EFR3Q03653 782 aaKnown RBP8.49□□□□□ -1.05
LSR1LSR1 PML39Q03760 334 aa8.49□□□□□ -1.05
LSR1LSR1 RKM1Q08961 583 aaPredicted RBP8.49□□□□□ -1.05
LSR1LSR1 SCM3Q12334 223 aa8.49□□□□□ -1.05
LSR1LSR1 WTM1Q12363 437 aaKnown RBP8.49□□□□□ -1.05
LSR1LSR1 YPL119C-AQ3E751 87 aa8.49□□□□□ -1.05
LSR1LSR1 RPS9AO13516 197 aaKnown RBP8.48□□□□□ -1.05
LSR1LSR1 DST1P07273 309 aa8.48□□□□□ -1.05
LSR1LSR1 HEM1P09950 548 aaPredicted RBP8.48□□□□□ -1.05
LSR1LSR1 PET122P10355 254 aa8.48□□□□□ -1.05
LSR1LSR1 DAP2P18962 818 aa8.48□□□□□ -1.05
LSR1LSR1 GBP2P25555 427 aaKnown RBP RIP-Chip data8.48□□□□□ -1.05not detected
LSR1LSR1 NTG1P31378 399 aa8.48□□□□□ -1.05
LSR1LSR1 POA1P38218 177 aa8.48□□□□□ -1.05
LSR1LSR1 PET100P38958 111 aa8.48□□□□□ -1.05
LSR1LSR1 GAB1P41733 394 aa8.48□□□□□ -1.05
LSR1LSR1 RMD8P43620 662 aa8.48□□□□□ -1.05
LSR1LSR1 SPO74P45819 413 aa8.48□□□□□ -1.05
LSR1LSR1 MON1P53129 644 aa8.48□□□□□ -1.05
LSR1LSR1 SDH1Q00711 640 aa8.48□□□□□ -1.05
LSR1LSR1 SPO71Q03868 1245 aa8.48□□□□□ -1.05
LSR1LSR1 YML083CQ04526 418 aa8.48□□□□□ -1.05
LSR1LSR1 FMP45Q07651 309 aa8.48□□□□□ -1.05
LSR1LSR1 YOR389WQ08912 624 aa8.48□□□□□ -1.05
LSR1LSR1 PEX11Q12462 236 aa8.48□□□□□ -1.05
LSR1LSR1 MED11Q99278 115 aa8.48□□□□□ -1.05
LSR1LSR1 PHO5P00635 467 aa8.47□□□□□ -1.05
LSR1LSR1 UBA1P22515 1024 aaKnown RBP8.47□□□□□ -1.05
LSR1LSR1 SFP1P32432 683 aa8.47□□□□□ -1.05
LSR1LSR1 CDC5P32562 705 aa8.47□□□□□ -1.05
LSR1LSR1 MRPL6P32904 214 aa8.47□□□□□ -1.05
LSR1LSR1 MRPL40P36534 297 aa8.47□□□□□ -1.05
LSR1LSR1 SOP4P39543 234 aaPredicted RBP8.47□□□□□ -1.05
LSR1LSR1 YFL052WP43551 465 aa8.47□□□□□ -1.05
LSR1LSR1 ATP22P50273 684 aaPredicted RBP8.47□□□□□ -1.05
LSR1LSR1 YNL143CP53908 130 aa8.47□□□□□ -1.05
LSR1LSR1 GSF2Q04697 403 aaKnown RBP8.47□□□□□ -1.05
LSR1LSR1 MRI1Q06489 411 aaKnown RBP8.47□□□□□ -1.05
LSR1LSR1 YOL131WQ08270 108 aa8.47□□□□□ -1.05
LSR1LSR1 SOG2Q08817 791 aa8.47□□□□□ -1.05
LSR1LSR1 RPN6Q12377 434 aa8.47□□□□□ -1.05
LSR1LSR1 MHF2Q3E829 80 aa8.47□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms