RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	REXO1	Q8N1G1	1221 aa	Known RBP	18.83	■□□□□ 0.6
PHGDH-223	ENST00000641597	THAP9	Q9H5L6	903 aa		18.83	■□□□□ 0.6
PHGDH-223	ENST00000641597	C6orf50	Q9HD87	102 aa		18.83	■□□□□ 0.6
PHGDH-223	ENST00000641597	SEC63	Q9UGP8	760 aa	Known RBP	18.83	■□□□□ 0.6
PHGDH-223	ENST00000641597	CAPN11	Q9UMQ6	739 aa		18.83	■□□□□ 0.6
PHGDH-223	ENST00000641597	MYMK	A6NI61	221 aa		18.82	■□□□□ 0.6
PHGDH-223	ENST00000641597	ZNF185	O15231	689 aa		18.82	■□□□□ 0.6
PHGDH-223	ENST00000641597	ZMYND10	O75800	440 aa		18.82	■□□□□ 0.6
PHGDH-223	ENST00000641597	PDHB	P11177	359 aa		18.82	■□□□□ 0.6
PHGDH-223	ENST00000641597	EEF1G	P26641	437 aa	Known RBP	18.82	■□□□□ 0.6
PHGDH-223	ENST00000641597	MTIF2	P46199	727 aa	Known RBP	18.82	■□□□□ 0.6
PHGDH-223	ENST00000641597	GTF2I	P78347	998 aa		18.82	■□□□□ 0.6
PHGDH-223	ENST00000641597	GRB10	Q13322	594 aa		18.82	■□□□□ 0.6
PHGDH-223	ENST00000641597	BEND6	Q5SZJ8	279 aa	Predicted RBP	18.82	■□□□□ 0.6
PHGDH-223	ENST00000641597	CCDC155	Q8N6L0	562 aa		18.82	■□□□□ 0.6
PHGDH-223	ENST00000641597	TTYH3	Q9C0H2	523 aa		18.82	■□□□□ 0.6
PHGDH-223	ENST00000641597	DDX4	Q9NQI0	724 aa	Known RBP	18.82	■□□□□ 0.6
PHGDH-223	ENST00000641597	BLOC1S4	Q9NUP1	217 aa		18.82	■□□□□ 0.6
PHGDH-223	ENST00000641597	MYO6	Q9UM54	1294 aa		18.82	■□□□□ 0.6
PHGDH-223	ENST00000641597	LDHC	P07864	332 aa		18.82	■□□□□ 0.6
PHGDH-223	ENST00000641597	SRGN	P10124	158 aa		18.82	■□□□□ 0.6
PHGDH-223	ENST00000641597	STIM1	Q13586	685 aa		18.82	■□□□□ 0.6
PHGDH-223	ENST00000641597	SOGA3	Q5TF21	947 aa		18.82	■□□□□ 0.6
PHGDH-223	ENST00000641597	GDAP1L1	Q96MZ0	367 aa		18.82	■□□□□ 0.6
PHGDH-223	ENST00000641597	MACROD2	A1Z1Q3	448 aa		18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	PRPH	P41219	470 aa		18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	TMED8	Q6PL24	325 aa	Predicted RBP	18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	KRT25	Q7Z3Z0	450 aa		18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	CEP112	Q8N8E3	955 aa		18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	PNMA5	Q96PV4	448 aa		18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	MMS19	Q96T76	1030 aa		18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	NOC4L	Q9BVI4	516 aa	Known RBP	18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	PDE11A	Q9HCR9	933 aa		18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	GGA1	Q9UJY5	639 aa		18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	ZNF831	Q5JPB2	1677 aa		18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	SRCAP	Q6ZRS2	3230 aa		18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	CCDC151	A5D8V7	595 aa		18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	ZNF263	O14978	683 aa		18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	PPP1R11	O60927	126 aa	Predicted RBP	18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	CCNE1	P24864	410 aa		18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	TRIM14	Q14142	442 aa		18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	ECM1	Q16610	540 aa		18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	DPP8	Q6V1X1	898 aa	Predicted RBP	18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	FAM207A	Q9NSI2	230 aa	Predicted RBP	18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	USP21	Q9UK80	565 aa		18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	DAGLA	Q9Y4D2	1042 aa		18.81	■□□□□ 0.6
PHGDH-223	ENST00000641597	CTAGE15	A4D2H0	777 aa		18.8	■□□□□ 0.6
PHGDH-223	ENST00000641597	CTAGE8	P0CG41	777 aa		18.8	■□□□□ 0.6
PHGDH-223	ENST00000641597	CYP2C19	P33261	490 aa		18.8	■□□□□ 0.6
PHGDH-223	ENST00000641597	TNNI2	P48788	182 aa		18.8	■□□□□ 0.6
PHGDH-223	ENST00000641597	SCNN1D	P51172	638 aa		18.8	■□□□□ 0.6
PHGDH-223	ENST00000641597	GALNT17	Q6IS24	598 aa		18.8	■□□□□ 0.6
PHGDH-223	ENST00000641597	CTAGE6	Q86UF2	777 aa		18.8	■□□□□ 0.6
PHGDH-223	ENST00000641597	CTAGE4	Q8IX94	777 aa		18.8	■□□□□ 0.6
PHGDH-223	ENST00000641597	TBC1D16	Q8TBP0	767 aa		18.8	■□□□□ 0.6
PHGDH-223	ENST00000641597	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	18.8	■□□□□ 0.6
PHGDH-223	ENST00000641597	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	18.8	■□□□□ 0.6
PHGDH-223	ENST00000641597	IDE	P14735	1019 aa		18.8	■□□□□ 0.6
PHGDH-223	ENST00000641597	DNM2	P50570	870 aa		18.8	■□□□□ 0.6
PHGDH-223	ENST00000641597	MRPS25	P82663	173 aa	Known RBP	18.8	■□□□□ 0.6
PHGDH-223	ENST00000641597	KANSL2	Q9H9L4	492 aa		18.8	■□□□□ 0.6
PHGDH-223	ENST00000641597	LTBP4	Q8N2S1	1624 aa		18.79	■□□□□ 0.6
PHGDH-223	ENST00000641597		A0A1W2PQC6	194 aa		18.79	■□□□□ 0.6
PHGDH-223	ENST00000641597	FAM196B	A6NMK8	535 aa		18.79	■□□□□ 0.6
PHGDH-223	ENST00000641597	RAD21	O60216	631 aa		18.79	■□□□□ 0.6
PHGDH-223	ENST00000641597	SERPINB2	P05120	415 aa		18.79	■□□□□ 0.6
PHGDH-223	ENST00000641597	GNA11	P29992	359 aa		18.79	■□□□□ 0.6
PHGDH-223	ENST00000641597	KIAA1328	Q86T90	577 aa		18.79	■□□□□ 0.6
PHGDH-223	ENST00000641597	DHTKD1	Q96HY7	919 aa	Predicted RBP	18.79	■□□□□ 0.6
PHGDH-223	ENST00000641597	C7orf25	Q9BPX7	421 aa		18.79	■□□□□ 0.6
PHGDH-223	ENST00000641597	LRWD1	Q9UFC0	647 aa		18.79	■□□□□ 0.6
PHGDH-223	ENST00000641597	LAD1	O00515	517 aa		18.79	■□□□□ 0.6
PHGDH-223	ENST00000641597	GYS1	P13807	737 aa		18.79	■□□□□ 0.6
PHGDH-223	ENST00000641597	IL1R1	P14778	569 aa		18.79	■□□□□ 0.6
PHGDH-223	ENST00000641597	CALCRL	Q16602	461 aa		18.79	■□□□□ 0.6
PHGDH-223	ENST00000641597	DRC1	Q96MC2	740 aa		18.79	■□□□□ 0.6
PHGDH-223	ENST00000641597	MTMR9	Q96QG7	549 aa		18.79	■□□□□ 0.6
PHGDH-223	ENST00000641597	TAF1L	Q8IZX4	1826 aa		18.78	■□□□□ 0.6
PHGDH-223	ENST00000641597	PHACTR2	O75167	634 aa		18.78	■□□□□ 0.6
PHGDH-223	ENST00000641597	GSPT2	Q8IYD1	628 aa	Known RBP	18.78	■□□□□ 0.6
PHGDH-223	ENST00000641597	CERS5	Q8N5B7	392 aa		18.78	■□□□□ 0.6
PHGDH-223	ENST00000641597	MSANTD4	Q8NCY6	345 aa		18.78	■□□□□ 0.6
PHGDH-223	ENST00000641597	FGFBP2	Q9BYJ0	223 aa		18.78	■□□□□ 0.6
PHGDH-223	ENST00000641597	MTMR4	Q9NYA4	1195 aa		18.78	■□□□□ 0.6
PHGDH-223	ENST00000641597	TBC1D7	Q9P0N9	293 aa		18.78	■□□□□ 0.6
PHGDH-223	ENST00000641597	MAP2K7	O14733	419 aa		18.78	■□□□□ 0.6
PHGDH-223	ENST00000641597	APBA1	Q02410	837 aa		18.78	■□□□□ 0.6
PHGDH-223	ENST00000641597	CACNB1	Q02641	598 aa	Predicted RBP	18.78	■□□□□ 0.6
PHGDH-223	ENST00000641597	RAD51AP2	Q09MP3	1159 aa		18.78	■□□□□ 0.6
PHGDH-223	ENST00000641597	KCTD1	Q719H9	257 aa		18.78	■□□□□ 0.6
PHGDH-223	ENST00000641597	JAKMIP2	Q96AA8	810 aa		18.78	■□□□□ 0.6
PHGDH-223	ENST00000641597	TRERF1	Q96PN7	1200 aa		18.78	■□□□□ 0.6
PHGDH-223	ENST00000641597	LZTS2	Q9BRK4	669 aa		18.78	■□□□□ 0.6
PHGDH-223	ENST00000641597	PCDHAC2	Q9Y5I4	1007 aa		18.78	■□□□□ 0.6
PHGDH-223	ENST00000641597	PDE2A	O00408	941 aa	Predicted RBP	18.77	■□□□□ 0.6
PHGDH-223	ENST00000641597	RGL2	O15211	777 aa		18.77	■□□□□ 0.6
PHGDH-223	ENST00000641597	DDR1	Q08345	913 aa		18.77	■□□□□ 0.6
PHGDH-223	ENST00000641597	TRAPPC11	Q7Z392	1133 aa		18.77	■□□□□ 0.6
PHGDH-223	ENST00000641597	AK8	Q96MA6	479 aa		18.77	■□□□□ 0.6
PHGDH-223	ENST00000641597	PSMB7	Q99436	277 aa		18.77	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms