RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 DHX8Q14562 1220 aaKnown RBP10.99□□□□□ -0.65
PHGDH-215ENST00000641371 SHROOM1Q2M3G4 852 aaPredicted RBP10.99□□□□□ -0.65
PHGDH-215ENST00000641371 LONRF3Q496Y0 759 aa10.99□□□□□ -0.65
PHGDH-215ENST00000641371 KLRG1Q96E93 195 aa10.99□□□□□ -0.65
PHGDH-215ENST00000641371 MBOAT7Q96N66 472 aa10.99□□□□□ -0.65
PHGDH-215ENST00000641371 NUP88Q99567 741 aaPredicted RBP10.99□□□□□ -0.65
PHGDH-215ENST00000641371 DISC1Q9NRI5 854 aa10.99□□□□□ -0.65
PHGDH-215ENST00000641371 TMOD4Q9NZQ9 345 aa10.99□□□□□ -0.65
PHGDH-215ENST00000641371 STK17AQ9UEE5 414 aa10.99□□□□□ -0.65
PHGDH-215ENST00000641371 DDX25Q9UHL0 483 aaKnown RBP10.99□□□□□ -0.65
PHGDH-215ENST00000641371 KDM3AQ9Y4C1 1321 aa10.99□□□□□ -0.65
PHGDH-215ENST00000641371 RBBP6Q7Z6E9 1792 aaKnown RBP10.98□□□□□ -0.65
PHGDH-215ENST00000641371 GOLGA6L6A8MZA4 724 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 MEIS2O14770 477 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 MARCH6O60337 910 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 ZBED4O75132 1171 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 DDNO94850 711 aaPredicted RBP10.98□□□□□ -0.65
PHGDH-215ENST00000641371 PTPRAP18433 802 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 CIITAP33076 1130 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 STAT6P42226 847 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 IREB2P48200 963 aaKnown RBP10.98□□□□□ -0.65
PHGDH-215ENST00000641371 TKFCQ3LXA3 575 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 NOM1Q5C9Z4 860 aaKnown RBP10.98□□□□□ -0.65
PHGDH-215ENST00000641371 RRAGBQ5VZM2 374 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 SARM1Q6SZW1 724 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.98□□□□□ -0.65
PHGDH-215ENST00000641371 SH3RF1Q7Z6J0 888 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 PNMA8AQ86V59 439 aaPredicted RBP10.98□□□□□ -0.65
PHGDH-215ENST00000641371 CDAN1Q8IWY9 1227 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 SPICE1Q8N0Z3 855 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 IGSF22Q8N9C0 903 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 RASSF8Q8NHQ8 419 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 SPATA20Q8TB22 786 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 KIFC2Q96AC6 838 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 DHX58Q96C10 678 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 FAM20AQ96MK3 541 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 MTMR9Q96QG7 549 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 NT5C3AQ9H0P0 336 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 DNAJC25Q9H1X3 360 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 CBX8Q9HC52 389 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 SERTAD1Q9UHV2 236 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 PPP1R9AQ9ULJ8 1098 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 CSADQ9Y600 493 aa10.98□□□□□ -0.65
PHGDH-215ENST00000641371 POLR2AP24928 1970 aaKnown RBP10.97□□□□□ -0.65
PHGDH-215ENST00000641371 GLTPD2A6NH11 291 aa10.97□□□□□ -0.65
PHGDH-215ENST00000641371 GTPBP6O43824 516 aaPredicted RBP10.97□□□□□ -0.65
PHGDH-215ENST00000641371 YBX3P16989 372 aaKnown RBP eCLIP10.97□□□□□ -0.652e-7■□□□□ 10.4
PHGDH-215ENST00000641371 YY1P25490 414 aa10.97□□□□□ -0.65
PHGDH-215ENST00000641371 SARSP49591 514 aaKnown RBP10.97□□□□□ -0.65
PHGDH-215ENST00000641371 MAP3K9P80192 1104 aa10.97□□□□□ -0.65
PHGDH-215ENST00000641371 ARHGAP4P98171 946 aa10.97□□□□□ -0.65
PHGDH-215ENST00000641371 MDM2Q00987 491 aaPredicted RBP10.97□□□□□ -0.65
PHGDH-215ENST00000641371 SETQ01105 290 aaPredicted RBP10.97□□□□□ -0.65
PHGDH-215ENST00000641371 GRIN1Q05586 938 aa10.97□□□□□ -0.65
PHGDH-215ENST00000641371 E2F4Q16254 413 aa10.97□□□□□ -0.65
PHGDH-215ENST00000641371 UBE2SQ16763 222 aa10.97□□□□□ -0.65
PHGDH-215ENST00000641371 Q4G0T1 1027 aa10.97□□□□□ -0.65
PHGDH-215ENST00000641371 SH3D19Q5HYK7 790 aa10.97□□□□□ -0.65
PHGDH-215ENST00000641371 KRT79Q5XKE5 535 aa10.97□□□□□ -0.65
PHGDH-215ENST00000641371 KRT26Q7Z3Y9 468 aa10.97□□□□□ -0.65
PHGDH-215ENST00000641371 CABP7Q86V35 215 aa10.97□□□□□ -0.65
PHGDH-215ENST00000641371 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.97□□□□□ -0.65
PHGDH-215ENST00000641371 EPSTI1Q96J88 318 aa10.97□□□□□ -0.65
PHGDH-215ENST00000641371 PANK2Q9BZ23 570 aa10.97□□□□□ -0.65
PHGDH-215ENST00000641371 TMEM60Q9H2L4 133 aa10.97□□□□□ -0.65
PHGDH-215ENST00000641371 SLC38A10Q9HBR0 1119 aa10.97□□□□□ -0.65
PHGDH-215ENST00000641371 PHIPQ8WWQ0 1821 aa10.97□□□□□ -0.65
PHGDH-215ENST00000641371 WNT7AO00755 349 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 FLOT1O75955 427 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 VCAM1P19320 739 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 ERCC5P28715 1186 aaPredicted RBP10.96□□□□□ -0.65
PHGDH-215ENST00000641371 INPP5BP32019 993 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 HIRAP54198 1017 aaPredicted RBP10.96□□□□□ -0.65
PHGDH-215ENST00000641371 MTMR2Q13614 643 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 IQCB1Q15051 598 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 GPR162Q16538 588 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 USH1GQ495M9 461 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 SPECC1Q5M775 1068 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 HAUS3Q68CZ6 603 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 NIPA1Q7RTP0 329 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 LDHDQ86WU2 507 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 PDILTQ8N807 584 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 ERMNQ8TAM6 284 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 CRYGNQ8WXF5 182 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 PAGE5Q96GU1 130 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 CDK5RAP3Q96JB5 506 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 TANGO6Q9C0B7 1094 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 TMEM260Q9NX78 707 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 LRWD1Q9UFC0 647 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 CCPG1Q9ULG6 757 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 PCDHA12Q9UN75 941 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 PCDHA5Q9Y5H7 936 aa10.96□□□□□ -0.65
PHGDH-215ENST00000641371 PARP14Q460N5 1801 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 WDR90Q96KV7 1748 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 ASTN2O75129 1339 aaPredicted RBP10.95□□□□□ -0.66
PHGDH-215ENST00000641371 USP17L15C9J2P7 530 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 USP17L13C9JLJ4 530 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 USP17L11C9JVI0 530 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 USP17L18D6R9N7 530 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 USP17L22D6RA61 530 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms