RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 CASP1P29466 404 aa13.17□□□□□ -0.3
RBFOX1-224ENST00000641259 KRT9P35527 623 aa13.17□□□□□ -0.3
RBFOX1-224ENST00000641259 DEFB132Q7Z7B7 95 aa13.17□□□□□ -0.3
RBFOX1-224ENST00000641259 KCNV2Q8TDN2 545 aa13.17□□□□□ -0.3
RBFOX1-224ENST00000641259 AIFM3Q96NN9 605 aa13.17□□□□□ -0.3
RBFOX1-224ENST00000641259 ATP6V0A2Q9Y487 856 aa13.17□□□□□ -0.3
RBFOX1-224ENST00000641259 USP17L12C9JPN9 530 aa13.17□□□□□ -0.3
RBFOX1-224ENST00000641259 USP17L21D6R901 530 aa13.17□□□□□ -0.3
RBFOX1-224ENST00000641259 SLC15A2Q16348 729 aa13.17□□□□□ -0.3
RBFOX1-224ENST00000641259 TMEM67Q5HYA8 995 aa13.17□□□□□ -0.3
RBFOX1-224ENST00000641259 RAD9BQ6WBX8 426 aa13.17□□□□□ -0.3
RBFOX1-224ENST00000641259 SPDYE1Q8NFV5 336 aaPredicted RBP13.17□□□□□ -0.3
RBFOX1-224ENST00000641259 RRP36Q96EU6 259 aaKnown RBP13.17□□□□□ -0.3
RBFOX1-224ENST00000641259 MXD3Q9BW11 206 aa13.17□□□□□ -0.3
RBFOX1-224ENST00000641259 SMARCAL1Q9NZC9 954 aa13.17□□□□□ -0.3
RBFOX1-224ENST00000641259 ANAPC4Q9UJX5 808 aa13.17□□□□□ -0.3
RBFOX1-224ENST00000641259 EME2A4GXA9 379 aaPredicted RBP13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 LDHBP07195 334 aaKnown RBP13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 MCM3P25205 808 aa13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 GSCP56915 257 aaPredicted RBP13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 FMR1NBQ8N0W7 255 aaPredicted RBP13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 LBHD1Q9BQE6 289 aaPredicted RBP13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 PICK1Q9NRD5 415 aa13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 POLR2DO15514 142 aaKnown RBP13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 MEFVO15553 781 aaPredicted RBP13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 CHRNA5P30532 468 aa13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 KCNB1Q14721 858 aa13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 CCDC96Q2M329 555 aa13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 SP8Q8IXZ3 490 aa13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 ANKRD13CQ8N6S4 541 aa13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 PHKBQ93100 1093 aa13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 GGT7Q9UJ14 662 aa13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 HPCAL4Q9UM19 191 aa13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 SAR1BQ9Y6B6 198 aa13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 SLX4Q8IY92 1834 aa13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 IFIT3O14879 490 aaKnown RBP13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 RANBP6O60518 1105 aaKnown RBP13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 NNTQ13423 1086 aa13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 ZKSCAN8Q15776 578 aaPredicted RBP13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 THEMIS2Q5TEJ8 643 aa13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 MMS19Q96T76 1030 aa13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 SLC40A1Q9NP59 571 aa13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 TAB2Q9NYJ8 693 aa13.16□□□□□ -0.3
RBFOX1-224ENST00000641259 SMIM24O75264 130 aa13.15□□□□□ -0.3
RBFOX1-224ENST00000641259 USP17L8P0C7I0 530 aa13.15□□□□□ -0.3
RBFOX1-224ENST00000641259 NPR1P16066 1061 aa13.15□□□□□ -0.3
RBFOX1-224ENST00000641259 ANO1Q5XXA6 986 aa13.15□□□□□ -0.3
RBFOX1-224ENST00000641259 WDR66Q8TBY9 1149 aa13.15□□□□□ -0.3
RBFOX1-224ENST00000641259 ARL8AQ96BM9 186 aa13.15□□□□□ -0.3
RBFOX1-224ENST00000641259 NUCKS1Q9H1E3 243 aaKnown RBP13.15□□□□□ -0.3
RBFOX1-224ENST00000641259 TLDC2A0PJX2 215 aa13.15□□□□□ -0.3
RBFOX1-224ENST00000641259 OPLAHO14841 1288 aa13.15□□□□□ -0.3
RBFOX1-224ENST00000641259 NMT2O60551 498 aa13.15□□□□□ -0.3
RBFOX1-224ENST00000641259 TBC1D1Q86TI0 1168 aaPredicted RBP13.15□□□□□ -0.3
RBFOX1-224ENST00000641259 SGMS1Q86VZ5 419 aa13.15□□□□□ -0.3
RBFOX1-224ENST00000641259 CMTR1Q8N1G2 835 aaKnown RBP13.15□□□□□ -0.3
RBFOX1-224ENST00000641259 COG1Q8WTW3 980 aa13.15□□□□□ -0.3
RBFOX1-224ENST00000641259 TMEM87BQ96K49 555 aa13.15□□□□□ -0.3
RBFOX1-224ENST00000641259 RTFDC1Q9BY42 306 aaPredicted RBP13.15□□□□□ -0.3
RBFOX1-224ENST00000641259 EIF3HO15372 352 aaKnown RBP eCLIP13.15□□□□□ -0.31
RBFOX1-224ENST00000641259 METAP2P50579 478 aaKnown RBP eCLIP13.15□□□□□ -0.31
RBFOX1-224ENST00000641259 NTRK3Q16288 839 aa13.15□□□□□ -0.31
RBFOX1-224ENST00000641259 PARP9Q8IXQ6 854 aa13.15□□□□□ -0.31
RBFOX1-224ENST00000641259 RPUSD2Q8IZ73 545 aaKnown RBP13.15□□□□□ -0.31
RBFOX1-224ENST00000641259 FLAD1Q8NFF5 587 aa13.15□□□□□ -0.31
RBFOX1-224ENST00000641259 JAKMIP2Q96AA8 810 aa13.15□□□□□ -0.31
RBFOX1-224ENST00000641259 CCDC43Q96MW1 224 aaKnown RBP13.15□□□□□ -0.31
RBFOX1-224ENST00000641259 UBAC1Q9BSL1 405 aa13.15□□□□□ -0.31
RBFOX1-224ENST00000641259 KRT23Q9C075 422 aa13.15□□□□□ -0.31
RBFOX1-224ENST00000641259 CNNM2Q9H8M5 875 aa13.15□□□□□ -0.31
RBFOX1-224ENST00000641259 KCNQ5Q9NR82 932 aa13.15□□□□□ -0.31
RBFOX1-224ENST00000641259 ADGRG1Q9Y653 693 aa13.15□□□□□ -0.31
RBFOX1-224ENST00000641259 DDX60LQ5H9U9 1706 aaKnown RBP13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 YEATS4O95619 227 aa13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 HDLBPQ00341 1268 aaKnown RBP13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 DOK7Q18PE1 504 aa13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 RBM43Q6ZSC3 357 aaKnown RBP13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 TC2NQ8N9U0 490 aa13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 NAV1Q8NEY1 1877 aa13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 CCDC189A1A4V9 331 aa13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 FAM133BQ5BKY9 247 aaKnown RBP13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 CAPRIN2Q6IMN6 1127 aaKnown RBP13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 CCDC13Q8IYE1 715 aa13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 ZNHIT6Q9NWK9 470 aaKnown RBP13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 KCNH3Q9ULD8 1083 aa13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 DLEC1Q9Y238 1755 aa13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 SYF2O95926 243 aaKnown RBP13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 IRX1P78414 480 aaPredicted RBP13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 SEC23AQ15436 765 aa13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 WHAMMP3Q1A5X7 153 aa13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 MFSD14BQ5SR56 506 aa13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 CERS5Q8N5B7 392 aa13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 L3MBTL1Q9Y468 752 aa13.14□□□□□ -0.31
RBFOX1-224ENST00000641259 QSER1Q2KHR3 1735 aa13.13□□□□□ -0.31
RBFOX1-224ENST00000641259 LIFRP42702 1097 aa13.13□□□□□ -0.31
RBFOX1-224ENST00000641259 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.13□□□□□ -0.31
RBFOX1-224ENST00000641259 DACH1Q9UI36 760 aa13.13□□□□□ -0.31
RBFOX1-224ENST00000641259 TNKSO95271 1327 aa13.13□□□□□ -0.31
RBFOX1-224ENST00000641259 GOLGA6L10A0A0M3HER8 536 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms