RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 DHTKD1Q96HY7 919 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-211ENST00000641213 THAP9Q9H5L6 903 aa19.16■□□□□ 0.66
PHGDH-211ENST00000641213 ZNF219Q9P2Y4 722 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-211ENST00000641213 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.16■□□□□ 0.66
PHGDH-211ENST00000641213 V9GYY5 206 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-211ENST00000641213 TNNI2P48788 182 aa19.15■□□□□ 0.66
PHGDH-211ENST00000641213 ASIC1P78348 528 aa19.15■□□□□ 0.66
PHGDH-211ENST00000641213 AMPD3Q01432 767 aa19.15■□□□□ 0.66
PHGDH-211ENST00000641213 PDE4DQ08499 809 aa19.15■□□□□ 0.66
PHGDH-211ENST00000641213 SHROOM1Q2M3G4 852 aaPredicted RBP19.15■□□□□ 0.66
PHGDH-211ENST00000641213 ZNF772Q68DY9 489 aaPredicted RBP19.15■□□□□ 0.66
PHGDH-211ENST00000641213 TTI2Q6NXR4 508 aa19.15■□□□□ 0.66
PHGDH-211ENST00000641213 RAD9BQ6WBX8 426 aa19.15■□□□□ 0.66
PHGDH-211ENST00000641213 SH3BP5LQ7L8J4 393 aa19.15■□□□□ 0.66
PHGDH-211ENST00000641213 CUL5Q93034 780 aa19.15■□□□□ 0.66
PHGDH-211ENST00000641213 CCDC47Q96A33 483 aaKnown RBP19.15■□□□□ 0.66
PHGDH-211ENST00000641213 EXOC1Q9NV70 894 aa19.15■□□□□ 0.66
PHGDH-211ENST00000641213 PI4KBQ9UBF8 816 aa19.15■□□□□ 0.66
PHGDH-211ENST00000641213 TPM1P09493 284 aa19.15■□□□□ 0.66
PHGDH-211ENST00000641213 FECHP22830 423 aa19.15■□□□□ 0.66
PHGDH-211ENST00000641213 TMEM266Q2M3C6 531 aa19.15■□□□□ 0.66
PHGDH-211ENST00000641213 CERKLQ49MI3 558 aaPredicted RBP19.15■□□□□ 0.66
PHGDH-211ENST00000641213 MKL1Q969V6 931 aa19.15■□□□□ 0.66
PHGDH-211ENST00000641213 TRIM47Q96LD4 638 aa19.15■□□□□ 0.66
PHGDH-211ENST00000641213 SRRTQ9BXP5 876 aaKnown RBP19.15■□□□□ 0.66
PHGDH-211ENST00000641213 PSME4Q14997 1843 aa19.15■□□□□ 0.66
PHGDH-211ENST00000641213 CCDC175P0C221 793 aa19.14■□□□□ 0.65
PHGDH-211ENST00000641213 EEF2P13639 858 aaKnown RBP19.14■□□□□ 0.65
PHGDH-211ENST00000641213 EEF1GP26641 437 aaKnown RBP19.14■□□□□ 0.65
PHGDH-211ENST00000641213 MRPL12P52815 198 aaKnown RBP19.14■□□□□ 0.65
PHGDH-211ENST00000641213 UBXN1Q04323 297 aa19.14■□□□□ 0.65
PHGDH-211ENST00000641213 PDIA5Q14554 519 aa19.14■□□□□ 0.65
PHGDH-211ENST00000641213 PPP4R3AQ6IN85 833 aa19.14■□□□□ 0.65
PHGDH-211ENST00000641213 PNMA5Q96PV4 448 aa19.14■□□□□ 0.65
PHGDH-211ENST00000641213 MRPL44Q9H9J2 332 aaKnown RBP19.14■□□□□ 0.65
PHGDH-211ENST00000641213 BLOC1S4Q9NUP1 217 aa19.14■□□□□ 0.65
PHGDH-211ENST00000641213 NYAP2Q9P242 653 aa19.14■□□□□ 0.65
PHGDH-211ENST00000641213 CGNQ9P2M7 1197 aaKnown RBP19.14■□□□□ 0.65
PHGDH-211ENST00000641213 RNF225M0QZC1 329 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-211ENST00000641213 CHRNA5P30532 468 aa19.13■□□□□ 0.65
PHGDH-211ENST00000641213 STK4Q13043 487 aa19.13■□□□□ 0.65
PHGDH-211ENST00000641213 LRRN4CLQ8ND94 238 aa19.13■□□□□ 0.65
PHGDH-211ENST00000641213 WDR24Q96S15 920 aa19.13■□□□□ 0.65
PHGDH-211ENST00000641213 DUSP9Q99956 384 aaKnown RBP19.13■□□□□ 0.65
PHGDH-211ENST00000641213 KANSL2Q9H9L4 492 aa19.13■□□□□ 0.65
PHGDH-211ENST00000641213 ADGRG1Q9Y653 693 aa19.13■□□□□ 0.65
PHGDH-211ENST00000641213 POTEMA6NI47 508 aa19.13■□□□□ 0.65
PHGDH-211ENST00000641213 NPM3O75607 178 aaKnown RBP19.13■□□□□ 0.65
PHGDH-211ENST00000641213 FCER1AP12319 257 aa19.13■□□□□ 0.65
PHGDH-211ENST00000641213 GNG11P61952 73 aa19.13■□□□□ 0.65
PHGDH-211ENST00000641213 TRIM14Q14142 442 aa19.13■□□□□ 0.65
PHGDH-211ENST00000641213 SV2BQ7L1I2 683 aa19.13■□□□□ 0.65
PHGDH-211ENST00000641213 ZSCAN29Q8IWY8 852 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-211ENST00000641213 NOC3LQ8WTT2 800 aaKnown RBP19.13■□□□□ 0.65
PHGDH-211ENST00000641213 P2RX5Q93086 422 aa19.13■□□□□ 0.65
PHGDH-211ENST00000641213 RAB34Q9BZG1 259 aa19.13■□□□□ 0.65
PHGDH-211ENST00000641213 PSTPIP2Q9H939 334 aa19.13■□□□□ 0.65
PHGDH-211ENST00000641213 STK17AQ9UEE5 414 aa19.13■□□□□ 0.65
PHGDH-211ENST00000641213 SERPINA10Q9UK55 444 aa19.13■□□□□ 0.65
PHGDH-211ENST00000641213 CCNE1P24864 410 aa19.12■□□□□ 0.65
PHGDH-211ENST00000641213 ELF2Q15723 593 aa19.12■□□□□ 0.65
PHGDH-211ENST00000641213 TATDN1Q6P1N9 297 aa19.12■□□□□ 0.65
PHGDH-211ENST00000641213 DCAF4Q8WV16 495 aa19.12■□□□□ 0.65
PHGDH-211ENST00000641213 NUP88Q99567 741 aaPredicted RBP19.12■□□□□ 0.65
PHGDH-211ENST00000641213 GTPBP4Q9BZE4 634 aaKnown RBP19.12■□□□□ 0.65
PHGDH-211ENST00000641213 ABHD10Q9NUJ1 306 aa19.12■□□□□ 0.65
PHGDH-211ENST00000641213 LGALS16A8MUM7 142 aa19.12■□□□□ 0.65
PHGDH-211ENST00000641213 RAD21O60216 631 aa19.12■□□□□ 0.65
PHGDH-211ENST00000641213 URI1O94763 535 aaPredicted RBP19.12■□□□□ 0.65
PHGDH-211ENST00000641213 MCM6Q14566 821 aa19.12■□□□□ 0.65
PHGDH-211ENST00000641213 AOC3Q16853 763 aa19.12■□□□□ 0.65
PHGDH-211ENST00000641213 SIAH1Q8IUQ4 282 aa19.12■□□□□ 0.65
PHGDH-211ENST00000641213 MB21D1Q8N884 522 aa19.12■□□□□ 0.65
PHGDH-211ENST00000641213 ZNF507Q8TCN5 953 aa19.12■□□□□ 0.65
PHGDH-211ENST00000641213 CDK5RAP3Q96JB5 506 aa19.12■□□□□ 0.65
PHGDH-211ENST00000641213 DDX25Q9UHL0 483 aaKnown RBP19.12■□□□□ 0.65
PHGDH-211ENST00000641213 ATF5Q9Y2D1 282 aaPredicted RBP19.12■□□□□ 0.65
PHGDH-211ENST00000641213 BICDL2A1A5D9 508 aa19.11■□□□□ 0.65
PHGDH-211ENST00000641213 CASQ1P31415 396 aa19.11■□□□□ 0.65
PHGDH-211ENST00000641213 PPP1R2P41236 205 aa19.11■□□□□ 0.65
PHGDH-211ENST00000641213 SLC1A4P43007 532 aa19.11■□□□□ 0.65
PHGDH-211ENST00000641213 SEPT2Q15019 361 aa19.11■□□□□ 0.65
PHGDH-211ENST00000641213 QRICH1Q2TAL8 776 aa19.11■□□□□ 0.65
PHGDH-211ENST00000641213 COBLL1Q53SF7 1204 aa19.11■□□□□ 0.65
PHGDH-211ENST00000641213 SLFN13Q68D06 897 aa19.11■□□□□ 0.65
PHGDH-211ENST00000641213 ANKRD40Q6AI12 368 aa19.11■□□□□ 0.65
PHGDH-211ENST00000641213 CNNM4Q6P4Q7 775 aa19.11■□□□□ 0.65
PHGDH-211ENST00000641213 CSGALNACT2Q8N6G5 542 aa19.11■□□□□ 0.65
PHGDH-211ENST00000641213 C7orf43Q8WVR3 580 aa19.11■□□□□ 0.65
PHGDH-211ENST00000641213 LARP4BQ92615 738 aaKnown RBP19.11■□□□□ 0.65
PHGDH-211ENST00000641213 CNKSR1Q969H4 720 aa19.11■□□□□ 0.65
PHGDH-211ENST00000641213 NUDT12Q9BQG2 462 aa19.11■□□□□ 0.65
PHGDH-211ENST00000641213 TRIM34Q9BYJ4 488 aa19.11■□□□□ 0.65
PHGDH-211ENST00000641213 MAGEC2Q9UBF1 373 aaPredicted RBP19.11■□□□□ 0.65
PHGDH-211ENST00000641213 MYMKA6NI61 221 aa19.1■□□□□ 0.65
PHGDH-211ENST00000641213 TMTC1Q8IUR5 882 aa19.1■□□□□ 0.65
PHGDH-211ENST00000641213 KIAA0895Q8NCT3 520 aa19.1■□□□□ 0.65
PHGDH-211ENST00000641213 HAS1Q92839 578 aa19.1■□□□□ 0.65
PHGDH-211ENST00000641213 A0A1W2PQC6 194 aa19.1■□□□□ 0.65
PHGDH-211ENST00000641213 ERVK-24P63145 666 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms