RNA–Protein interactions for RNA: ENST00000641104.1

MACF1-235, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-235ENST00000641104 CUL4BQ13620 913 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 ANKRD42Q8N9B4 389 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 BBOF1Q8ND07 529 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 RILPQ96NA2 401 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 NUF2Q9BZD4 464 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 RRAGDQ9NQL2 400 aaPredicted RBP13.1□□□□□ -0.31
MACF1-235ENST00000641104 ANKFY1Q9P2R3 1169 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 ADGBQ8N7X0 1667 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 M0R2C6 588 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 OATP04181 439 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 PIK3CAP42336 1068 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 MFAP3P55082 362 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 FAM196AQ6ZSG2 479 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 TSC1Q92574 1164 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 CNOT6LQ96LI5 555 aaKnown RBP13.1□□□□□ -0.31
MACF1-235ENST00000641104 PLEKHA4Q9H4M7 779 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 QTRT2Q9H974 415 aaKnown RBP13.1□□□□□ -0.31
MACF1-235ENST00000641104 EPN1Q9Y6I3 576 aaPredicted RBP13.1□□□□□ -0.31
MACF1-235ENST00000641104 XPOTO43592 962 aaKnown RBP13.1□□□□□ -0.31
MACF1-235ENST00000641104 MYL7Q01449 175 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 PSMD6Q15008 389 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 TSNAXIP1Q2TAA8 658 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 ADCK5Q3MIX3 580 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 CC2D2BQ6DHV5 1058 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 LRRC8AQ8IWT6 810 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 RABEP2Q9H5N1 569 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 POLR3EQ9NVU0 708 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 BCAP29Q9UHQ4 241 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 METP08581 1390 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 CARMIL3Q8ND23 1372 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 WDR17Q8IZU2 1322 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 YEATS2Q9ULM3 1422 aa13.1□□□□□ -0.31
MACF1-235ENST00000641104 RFX1P22670 979 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 RASSF2P50749 326 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 ETF1P62495 437 aaKnown RBP13.09□□□□□ -0.31
MACF1-235ENST00000641104 PPP4R1Q8TF05 950 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 ZNF577Q9BSK1 485 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 NLRP1Q9C000 1473 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 CLASP1Q7Z460 1538 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 HNRNPDLO14979 420 aaKnown RBP13.09□□□□□ -0.31
MACF1-235ENST00000641104 NAA25Q14CX7 972 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 SMAP1Q8IYB5 467 aaPredicted RBP13.09□□□□□ -0.31
MACF1-235ENST00000641104 RASEFQ8IZ41 740 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 DHTKD1Q96HY7 919 aaPredicted RBP13.09□□□□□ -0.31
MACF1-235ENST00000641104 NT5C1BQ96P26 610 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 WDR11Q9BZH6 1224 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 FAM170AA1A519 330 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 ERVV-1B6SEH8 477 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.09□□□□□ -0.31
MACF1-235ENST00000641104 TUBGCP2Q9BSJ2 902 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 PCDHA5Q9Y5H7 936 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 CLRN2A0PK11 232 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 TLR3O15455 904 aaKnown RBP13.09□□□□□ -0.31
MACF1-235ENST00000641104 LMNB1P20700 586 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 IGBP1P78318 339 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 ERFEQ4G0M1 354 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 PNMA8AQ86V59 439 aaPredicted RBP13.09□□□□□ -0.31
MACF1-235ENST00000641104 MGARPQ8TDB4 240 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 GDAP1L1Q96MZ0 367 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 SAMD9Q5K651 1589 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 ABL1P00519 1130 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 BFSP1Q12934 665 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 SPICE1Q8N0Z3 855 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 SEC31BQ9NQW1 1179 aa13.09□□□□□ -0.31
MACF1-235ENST00000641104 SEPT9Q9UHD8 586 aaPredicted RBP13.09□□□□□ -0.31
MACF1-235ENST00000641104 ABCC12Q96J65 1359 aa13.08□□□□□ -0.31
MACF1-235ENST00000641104 A0A1B0GUA9 196 aa13.08□□□□□ -0.32
MACF1-235ENST00000641104 EFCAB8A8MWE9 144 aa13.08□□□□□ -0.32
MACF1-235ENST00000641104 GOLGA8KD6RF30 607 aa13.08□□□□□ -0.32
MACF1-235ENST00000641104 CASQ2O14958 399 aaPredicted RBP13.08□□□□□ -0.32
MACF1-235ENST00000641104 BUB1BO60566 1050 aaPredicted RBP13.08□□□□□ -0.32
MACF1-235ENST00000641104 EEF1GP26641 437 aaKnown RBP13.08□□□□□ -0.32
MACF1-235ENST00000641104 DYNLL1P63167 89 aaKnown RBP13.08□□□□□ -0.32
MACF1-235ENST00000641104 SESTD1Q86VW0 696 aa13.08□□□□□ -0.32
MACF1-235ENST00000641104 MAP7D3Q8IWC1 876 aa13.08□□□□□ -0.32
MACF1-235ENST00000641104 CCDC13Q8IYE1 715 aa13.08□□□□□ -0.32
MACF1-235ENST00000641104 NSUN7Q8NE18 718 aaKnown RBP13.08□□□□□ -0.32
MACF1-235ENST00000641104 DHX36Q9H2U1 1008 aaKnown RBP13.08□□□□□ -0.32
MACF1-235ENST00000641104 SERPINB13Q9UIV8 391 aa13.08□□□□□ -0.32
MACF1-235ENST00000641104 NPHP4O75161 1426 aaPredicted RBP13.08□□□□□ -0.32
MACF1-235ENST00000641104 PFDN6O15212 129 aa13.08□□□□□ -0.32
MACF1-235ENST00000641104 PSMC2P35998 433 aaKnown RBP13.08□□□□□ -0.32
MACF1-235ENST00000641104 RINT1Q6NUQ1 792 aa13.08□□□□□ -0.32
MACF1-235ENST00000641104 SLC7A3Q8WY07 619 aa13.08□□□□□ -0.32
MACF1-235ENST00000641104 RUNDC3BQ96NL0 473 aa13.08□□□□□ -0.32
MACF1-235ENST00000641104 ADD3Q9UEY8 706 aaKnown RBP13.08□□□□□ -0.32
MACF1-235ENST00000641104 GCC2Q8IWJ2 1684 aa13.08□□□□□ -0.32
MACF1-235ENST00000641104 ATF2P15336 505 aa13.08□□□□□ -0.32
MACF1-235ENST00000641104 ZNF710Q8N1W2 664 aa13.08□□□□□ -0.32
MACF1-235ENST00000641104 NR2F2P24468 414 aa13.08□□□□□ -0.32
MACF1-235ENST00000641104 VPS41P49754 854 aa13.08□□□□□ -0.32
MACF1-235ENST00000641104 RPS6KA2Q15349 733 aa13.08□□□□□ -0.32
MACF1-235ENST00000641104 SUPT20HL1Q3ZLR7 823 aa13.08□□□□□ -0.32
MACF1-235ENST00000641104 DPP9Q86TI2 863 aa13.08□□□□□ -0.32
MACF1-235ENST00000641104 PRPF31Q8WWY3 499 aaKnown RBP13.08□□□□□ -0.32
MACF1-235ENST00000641104 RPS6KC1Q96S38 1066 aa13.08□□□□□ -0.32
MACF1-235ENST00000641104 DPH5Q9H2P9 285 aa13.08□□□□□ -0.32
MACF1-235ENST00000641104 CACYBPQ9HB71 228 aaKnown RBP13.08□□□□□ -0.32
MACF1-235ENST00000641104 USP6P35125 1406 aa13.07□□□□□ -0.32
MACF1-235ENST00000641104 THAP12O43422 761 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms