RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 TAPT1Q6NXT6 567 aa20.76■□□□□ 0.91
SPIN3-220ENST00000639257 APOA5Q6Q788 366 aa20.76■□□□□ 0.91
SPIN3-220ENST00000639257 SAMD3Q8N6K7 520 aa20.76■□□□□ 0.91
SPIN3-220ENST00000639257 CTCFLQ8NI51 663 aaPredicted RBP20.76■□□□□ 0.91
SPIN3-220ENST00000639257 SYTL5Q8TDW5 730 aaPredicted RBP20.76■□□□□ 0.91
SPIN3-220ENST00000639257 NUP133Q8WUM0 1156 aa20.76■□□□□ 0.91
SPIN3-220ENST00000639257 TBC1D5Q92609 795 aa20.76■□□□□ 0.91
SPIN3-220ENST00000639257 UPF3AQ9H1J1 476 aaKnown RBP20.76■□□□□ 0.91
SPIN3-220ENST00000639257 COL20A1Q9P218 1284 aa20.76■□□□□ 0.91
SPIN3-220ENST00000639257 CST5P28325 142 aaPredicted RBP20.75■□□□□ 0.91
SPIN3-220ENST00000639257 GNAQP50148 359 aa20.75■□□□□ 0.91
SPIN3-220ENST00000639257 HSD17B4P51659 736 aa20.75■□□□□ 0.91
SPIN3-220ENST00000639257 CCSAPQ6IQ19 270 aaPredicted RBP20.75■□□□□ 0.91
SPIN3-220ENST00000639257 MCF2L2Q86YR7 1114 aa20.75■□□□□ 0.91
SPIN3-220ENST00000639257 KLHDC9Q8NEP7 349 aa20.75■□□□□ 0.91
SPIN3-220ENST00000639257 VTA1Q9NP79 307 aa20.75■□□□□ 0.91
SPIN3-220ENST00000639257 XPNPEP3Q9NQH7 507 aa20.75■□□□□ 0.91
SPIN3-220ENST00000639257 MAP3K20Q9NYL2 800 aaKnown RBP20.75■□□□□ 0.91
SPIN3-220ENST00000639257 ZHX1Q9UKY1 873 aaPredicted RBP20.75■□□□□ 0.91
SPIN3-220ENST00000639257 SLC12A7Q9Y666 1083 aa20.75■□□□□ 0.91
SPIN3-220ENST00000639257 DDX49Q9Y6V7 483 aaKnown RBP20.75■□□□□ 0.91
SPIN3-220ENST00000639257 SYNRGQ9UMZ2 1314 aa20.75■□□□□ 0.91
SPIN3-220ENST00000639257 RBM47A0AV96 593 aaKnown RBP20.74■□□□□ 0.91
SPIN3-220ENST00000639257 PLEKHA8P1O95397 391 aa20.74■□□□□ 0.91
SPIN3-220ENST00000639257 CALML3P27482 149 aa20.74■□□□□ 0.91
SPIN3-220ENST00000639257 TRAF1Q13077 416 aa20.74■□□□□ 0.91
SPIN3-220ENST00000639257 NFXL1Q6ZNB6 911 aa20.74■□□□□ 0.91
SPIN3-220ENST00000639257 SRBD1Q8N5C6 995 aaKnown RBP20.74■□□□□ 0.91
SPIN3-220ENST00000639257 FANCBQ8NB91 859 aa20.74■□□□□ 0.91
SPIN3-220ENST00000639257 LENG1Q96BZ8 264 aaPredicted RBP20.74■□□□□ 0.91
SPIN3-220ENST00000639257 TCEANC2Q96MN5 208 aa20.74■□□□□ 0.91
SPIN3-220ENST00000639257 BRPF3Q9ULD4 1205 aa20.74■□□□□ 0.91
SPIN3-220ENST00000639257 PHF24Q9UPV7 400 aa20.74■□□□□ 0.91
SPIN3-220ENST00000639257 GNEQ9Y223 722 aaKnown RBP20.74■□□□□ 0.91
SPIN3-220ENST00000639257 PCDHA1Q9Y5I3 950 aa20.74■□□□□ 0.91
SPIN3-220ENST00000639257 NID2Q14112 1375 aa20.73■□□□□ 0.91
SPIN3-220ENST00000639257 CTAGE5O15320 804 aa20.73■□□□□ 0.91
SPIN3-220ENST00000639257 SNX17Q15036 470 aa20.73■□□□□ 0.91
SPIN3-220ENST00000639257 GJC2Q5T442 439 aaPredicted RBP20.73■□□□□ 0.91
SPIN3-220ENST00000639257 TMTC3Q6ZXV5 915 aa20.73■□□□□ 0.91
SPIN3-220ENST00000639257 PGK1P00558 417 aa20.72■□□□□ 0.91
SPIN3-220ENST00000639257 RXRAP19793 462 aa20.72■□□□□ 0.91
SPIN3-220ENST00000639257 GJA9P57773 515 aa20.72■□□□□ 0.91
SPIN3-220ENST00000639257 FUT2Q10981 343 aa20.72■□□□□ 0.91
SPIN3-220ENST00000639257 C1orf53Q5VUE5 145 aa20.72■□□□□ 0.91
SPIN3-220ENST00000639257 HOMER1Q86YM7 354 aa20.72■□□□□ 0.91
SPIN3-220ENST00000639257 JAKMIP1Q96N16 626 aaKnown RBP20.72■□□□□ 0.91
SPIN3-220ENST00000639257 TSEN34Q9BSV6 310 aaKnown RBP20.72■□□□□ 0.91
SPIN3-220ENST00000639257 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.71■□□□□ 0.91
SPIN3-220ENST00000639257 CPA1P15085 419 aa20.71■□□□□ 0.91
SPIN3-220ENST00000639257 RPS6KB1P23443 525 aa20.71■□□□□ 0.91
SPIN3-220ENST00000639257 ADCYAP1R1P41586 468 aa20.71■□□□□ 0.91
SPIN3-220ENST00000639257 EVCP57679 992 aa20.71■□□□□ 0.91
SPIN3-220ENST00000639257 LRRC26Q2I0M4 334 aa20.71■□□□□ 0.91
SPIN3-220ENST00000639257 IQSEC1Q6DN90 963 aa20.71■□□□□ 0.91
SPIN3-220ENST00000639257 BLOC1S2Q6QNY1 142 aa20.71■□□□□ 0.91
SPIN3-220ENST00000639257 RNF180Q86T96 592 aa20.71■□□□□ 0.91
SPIN3-220ENST00000639257 MICU3Q86XE3 530 aa20.71■□□□□ 0.91
SPIN3-220ENST00000639257 FBXO16Q8IX29 292 aaPredicted RBP20.71■□□□□ 0.91
SPIN3-220ENST00000639257 DPF3Q92784 378 aa20.71■□□□□ 0.91
SPIN3-220ENST00000639257 IL17RAQ96F46 866 aa20.71■□□□□ 0.91
SPIN3-220ENST00000639257 TAAR1Q96RJ0 339 aa20.71■□□□□ 0.91
SPIN3-220ENST00000639257 TM6SF1Q9BZW5 370 aa20.71■□□□□ 0.91
SPIN3-220ENST00000639257 ZSWIM6Q9HCJ5 1215 aa20.71■□□□□ 0.91
SPIN3-220ENST00000639257 PDGFCQ9NRA1 345 aa20.71■□□□□ 0.91
SPIN3-220ENST00000639257 FAM217BQ9NTX9 383 aaPredicted RBP20.71■□□□□ 0.91
SPIN3-220ENST00000639257 Q9Y3F1 56 aa20.71■□□□□ 0.91
SPIN3-220ENST00000639257 KBTBD13C9JR72 458 aa20.7■□□□□ 0.9
SPIN3-220ENST00000639257 H0YGN5 161 aa20.7■□□□□ 0.9
SPIN3-220ENST00000639257 SMPD1P17405 629 aa20.7■□□□□ 0.9
SPIN3-220ENST00000639257 PSMA5P28066 241 aa20.7■□□□□ 0.9
SPIN3-220ENST00000639257 RRP36Q96EU6 259 aaKnown RBP20.7■□□□□ 0.9
SPIN3-220ENST00000639257 SENP6Q9GZR1 1112 aaPredicted RBP20.7■□□□□ 0.9
SPIN3-220ENST00000639257 RBM28Q9NW13 759 aaKnown RBP20.7■□□□□ 0.9
SPIN3-220ENST00000639257 NR2E3Q9Y5X4 410 aa20.7■□□□□ 0.9
SPIN3-220ENST00000639257 MYADML2A6NDP7 307 aa20.69■□□□□ 0.9
SPIN3-220ENST00000639257 EVI5O60447 810 aa20.69■□□□□ 0.9
SPIN3-220ENST00000639257 TNFAIP2Q03169 654 aa20.69■□□□□ 0.9
SPIN3-220ENST00000639257 NSUN6Q8TEA1 469 aaKnown RBP20.69■□□□□ 0.9
SPIN3-220ENST00000639257 IWS1Q96ST2 819 aa20.69■□□□□ 0.9
SPIN3-220ENST00000639257 CNTNAP5Q8WYK1 1306 aa20.69■□□□□ 0.9
SPIN3-220ENST00000639257 MOXD2PA6NHM9 499 aa20.68■□□□□ 0.9
SPIN3-220ENST00000639257 ZBTB43O43298 467 aa20.68■□□□□ 0.9
SPIN3-220ENST00000639257 PPP2R5BQ15173 497 aa20.68■□□□□ 0.9
SPIN3-220ENST00000639257 DUSP28Q4G0W2 176 aa20.68■□□□□ 0.9
SPIN3-220ENST00000639257 TMEM63BQ5T3F8 832 aa20.68■□□□□ 0.9
SPIN3-220ENST00000639257 Q6ZUG5 572 aa20.68■□□□□ 0.9
SPIN3-220ENST00000639257 RAB11FIP4Q86YS3 637 aa20.68■□□□□ 0.9
SPIN3-220ENST00000639257 CMTR1Q8N1G2 835 aaKnown RBP20.68■□□□□ 0.9
SPIN3-220ENST00000639257 RMDN3Q96TC7 470 aa20.68■□□□□ 0.9
SPIN3-220ENST00000639257 MPHOSPH6Q99547 160 aaKnown RBP20.68■□□□□ 0.9
SPIN3-220ENST00000639257 PRO3102Q9H379 93 aa20.68■□□□□ 0.9
SPIN3-220ENST00000639257 FRMPD4Q14CM0 1322 aa20.68■□□□□ 0.9
SPIN3-220ENST00000639257 KLF18A0A0U1RQI7 1052 aa20.67■□□□□ 0.9
SPIN3-220ENST00000639257 B4DLN1 442 aa20.67■□□□□ 0.9
SPIN3-220ENST00000639257 PIK3CDO00329 1044 aa20.67■□□□□ 0.9
SPIN3-220ENST00000639257 CFBP00751 764 aa20.67■□□□□ 0.9
SPIN3-220ENST00000639257 CASTP20810 708 aaKnown RBP20.67■□□□□ 0.9
SPIN3-220ENST00000639257 MRPL12P52815 198 aaKnown RBP20.67■□□□□ 0.9
SPIN3-220ENST00000639257 IRX5P78411 483 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms