RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 SMARCA1P28370 1054 aa11.87□□□□□ -0.51
NECAP1-216ENST00000639167 ADCY7P51828 1080 aa11.87□□□□□ -0.51
NECAP1-216ENST00000639167 GABPAQ06546 454 aa11.87□□□□□ -0.51
NECAP1-216ENST00000639167 GRB10Q13322 594 aa11.87□□□□□ -0.51
NECAP1-216ENST00000639167 MCM6Q14566 821 aa11.87□□□□□ -0.51
NECAP1-216ENST00000639167 UBE2SQ16763 222 aa11.87□□□□□ -0.51
NECAP1-216ENST00000639167 TTBK2Q6IQ55 1244 aa11.87□□□□□ -0.51
NECAP1-216ENST00000639167 GPR161Q8N6U8 529 aaKnown RBP11.87□□□□□ -0.51
NECAP1-216ENST00000639167 DHTKD1Q96HY7 919 aaPredicted RBP11.87□□□□□ -0.51
NECAP1-216ENST00000639167 CNOT6LQ96LI5 555 aaKnown RBP11.87□□□□□ -0.51
NECAP1-216ENST00000639167 TUBGCP2Q9BSJ2 902 aa11.87□□□□□ -0.51
NECAP1-216ENST00000639167 MAGEF1Q9HAY2 307 aa11.87□□□□□ -0.51
NECAP1-216ENST00000639167 SLC39A2Q9NP94 309 aa11.87□□□□□ -0.51
NECAP1-216ENST00000639167 LRWD1Q9UFC0 647 aa11.87□□□□□ -0.51
NECAP1-216ENST00000639167 CDC23Q9UJX2 597 aa11.87□□□□□ -0.51
NECAP1-216ENST00000639167 TFR2Q9UP52 801 aa11.87□□□□□ -0.51
NECAP1-216ENST00000639167 REXO2Q9Y3B8 237 aaKnown RBP11.87□□□□□ -0.51
NECAP1-216ENST00000639167 EPN1Q9Y6I3 576 aaPredicted RBP11.87□□□□□ -0.51
NECAP1-216ENST00000639167 A0A1W2PQC6 194 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 ESYT2A0FGR8 921 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 CTAGE9A4FU28 777 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 POTEMA6NI47 508 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 NDUFA10O95299 355 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 SLC16A2P36021 539 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 PLA2G4AP47712 749 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 TNNI2P48788 182 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 CHMP4BP1P59074 171 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 GABPB1Q06547 395 aaPredicted RBP11.86□□□□□ -0.51
NECAP1-216ENST00000639167 DYMQ7RTS9 669 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 SRGAP1Q7Z6B7 1085 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 KIAA0895Q8NCT3 520 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 OR8K1Q8NGG5 319 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 PCMTD1Q96MG8 357 aaPredicted RBP11.86□□□□□ -0.51
NECAP1-216ENST00000639167 PNMA5Q96PV4 448 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 UIMC1Q96RL1 719 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 USP40Q9NVE5 1235 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 A0A0U1RQG5 324 aaPredicted RBP11.86□□□□□ -0.51
NECAP1-216ENST00000639167 MPHOSPH10O00566 681 aaKnown RBP11.86□□□□□ -0.51
NECAP1-216ENST00000639167 TRIM37O94972 964 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 MTIF2P46199 727 aaKnown RBP11.86□□□□□ -0.51
NECAP1-216ENST00000639167 DNM2P50570 870 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 ASPRV1Q53RT3 343 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 CC2D1AQ6P1N0 951 aaPredicted RBP11.86□□□□□ -0.51
NECAP1-216ENST00000639167 WDR59Q6PJI9 974 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 SP8Q8IXZ3 490 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 RABGGTAQ92696 567 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 GJA10Q969M2 543 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 CDK5RAP3Q96JB5 506 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 MTMR9Q96QG7 549 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 NUDT12Q9BQG2 462 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 JMJD4Q9H9V9 463 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 BLOC1S4Q9NUP1 217 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 AGPAT5Q9NUQ2 364 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 GUCA1BQ9UMX6 200 aa11.86□□□□□ -0.51
NECAP1-216ENST00000639167 IGKV6D-41A0A0C4DH26 115 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 BICDL2A1A5D9 508 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 MYMKA6NI61 221 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 RAD21O60216 631 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 PPP1R11O60927 126 aaPredicted RBP11.85□□□□□ -0.51
NECAP1-216ENST00000639167 SRGNP10124 158 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 AMPD3Q01432 767 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 TBC1D8BQ0IIM8 1120 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 KCTD1Q719H9 257 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 SV2BQ7L1I2 683 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 ZNF771Q7L3S4 317 aaPredicted RBP11.85□□□□□ -0.51
NECAP1-216ENST00000639167 ADGRF4Q8IZF3 695 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 NOC3LQ8WTT2 800 aaKnown RBP11.85□□□□□ -0.51
NECAP1-216ENST00000639167 DNAJC7Q99615 494 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 NAPGQ99747 312 aaPredicted RBP11.85□□□□□ -0.51
NECAP1-216ENST00000639167 NOC4LQ9BVI4 516 aaKnown RBP11.85□□□□□ -0.51
NECAP1-216ENST00000639167 ZC3H12CQ9C0D7 883 aaKnown RBP11.85□□□□□ -0.51
NECAP1-216ENST00000639167 COA1Q9GZY4 146 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 SEMA6BQ9H3T3 888 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 SERPINB13Q9UIV8 391 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 CAPN11Q9UMQ6 739 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 PLIN4Q96Q06 1357 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 RASSF10A6NK89 507 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 SASH3O75995 380 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 TTLL1O95922 423 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 SNHG28P0DPA3 235 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 TRIM21P19474 475 aaKnown RBP11.85□□□□□ -0.51
NECAP1-216ENST00000639167 ZNF543Q08ER8 600 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 CCDC96Q2M329 555 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 TMEM266Q2M3C6 531 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 TSR1Q2NL82 804 aaKnown RBP11.85□□□□□ -0.51
NECAP1-216ENST00000639167 CNNM4Q6P4Q7 775 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 LARP4BQ92615 738 aaKnown RBP11.85□□□□□ -0.51
NECAP1-216ENST00000639167 ATP6V0A2Q9Y487 856 aa11.85□□□□□ -0.51
NECAP1-216ENST00000639167 KLRG2A4D1S0 409 aaPredicted RBP11.84□□□□□ -0.51
NECAP1-216ENST00000639167 hCG_1984214I3L0E3 225 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 ONECUT3O60422 494 aaPredicted RBP11.84□□□□□ -0.51
NECAP1-216ENST00000639167 TBC1D8O95759 1140 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 SHMT1P34896 483 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 HERVK_113P62684 666 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 NFIAQ12857 509 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 TERF2Q15554 542 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 CDC42EP5Q6NZY7 148 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 ZNF713Q8N859 430 aaPredicted RBP11.84□□□□□ -0.51
NECAP1-216ENST00000639167 CEP112Q8N8E3 955 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 SNX29Q8TEQ0 813 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms