RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 LARP6Q9BRS8 491 aaKnown RBP25.26■■□□□ 1.63
SCN1B-206ENST00000638536 SEPT4O43236 478 aa25.26■■□□□ 1.63
SCN1B-206ENST00000638536 TOB2Q14106 344 aaPredicted RBP25.26■■□□□ 1.63
SCN1B-206ENST00000638536 SYNE3Q6ZMZ3 975 aa25.26■■□□□ 1.63
SCN1B-206ENST00000638536 FBXL16Q8N461 479 aa25.26■■□□□ 1.63
SCN1B-206ENST00000638536 TM6SF1Q9BZW5 370 aa25.26■■□□□ 1.63
SCN1B-206ENST00000638536 NAP1L2Q9ULW6 460 aaPredicted RBP25.26■■□□□ 1.63
SCN1B-206ENST00000638536 GTF3C3Q9Y5Q9 886 aa25.26■■□□□ 1.63
SCN1B-206ENST00000638536 LRRC37A2A6NM11 1700 aa25.26■■□□□ 1.63
SCN1B-206ENST00000638536 CEP290O15078 2479 aa25.25■■□□□ 1.63
SCN1B-206ENST00000638536 SMARCA1P28370 1054 aa25.25■■□□□ 1.63
SCN1B-206ENST00000638536 RGS22Q8NE09 1264 aa25.25■■□□□ 1.63
SCN1B-206ENST00000638536 MRPL11Q9Y3B7 192 aaKnown RBP25.25■■□□□ 1.63
SCN1B-206ENST00000638536 ADCY6O43306 1168 aa25.24■■□□□ 1.63
SCN1B-206ENST00000638536 GNAQP50148 359 aa25.24■■□□□ 1.63
SCN1B-206ENST00000638536 ALDH5A1P51649 535 aaPredicted RBP25.24■■□□□ 1.63
SCN1B-206ENST00000638536 FUT2Q10981 343 aa25.24■■□□□ 1.63
SCN1B-206ENST00000638536 ACVR2BQ13705 512 aa25.24■■□□□ 1.63
SCN1B-206ENST00000638536 SYTL5Q8TDW5 730 aaPredicted RBP25.24■■□□□ 1.63
SCN1B-206ENST00000638536 LZTS2Q9BRK4 669 aa25.24■■□□□ 1.63
SCN1B-206ENST00000638536 ZHX1Q9UKY1 873 aaPredicted RBP25.24■■□□□ 1.63
SCN1B-206ENST00000638536 CNPY2Q9Y2B0 182 aa25.24■■□□□ 1.63
SCN1B-206ENST00000638536 CYP46A1Q9Y6A2 500 aa25.24■■□□□ 1.63
SCN1B-206ENST00000638536 GOLGA8AA7E2F4 631 aa25.23■■□□□ 1.63
SCN1B-206ENST00000638536 GOLGA8BA8MQT2 603 aa25.23■■□□□ 1.63
SCN1B-206ENST00000638536 ADD1P35611 737 aaKnown RBP25.23■■□□□ 1.63
SCN1B-206ENST00000638536 RTN1Q16799 776 aa25.23■■□□□ 1.63
SCN1B-206ENST00000638536 EEPD1Q7L9B9 569 aa25.23■■□□□ 1.63
SCN1B-206ENST00000638536 RRP36Q96EU6 259 aaKnown RBP25.23■■□□□ 1.63
SCN1B-206ENST00000638536 PAWRQ96IZ0 340 aaKnown RBP25.23■■□□□ 1.63
SCN1B-206ENST00000638536 TAAR1Q96RJ0 339 aa25.23■■□□□ 1.63
SCN1B-206ENST00000638536 NRBP1Q9UHY1 535 aa25.23■■□□□ 1.63
SCN1B-206ENST00000638536 FARP2O94887 1054 aaPredicted RBP25.23■■□□□ 1.63
SCN1B-206ENST00000638536 CFBP00751 764 aa25.23■■□□□ 1.63
SCN1B-206ENST00000638536 CNTNAP5Q8WYK1 1306 aa25.22■■□□□ 1.63
SCN1B-206ENST00000638536 ALPK3Q96L96 1907 aa25.22■■□□□ 1.63
SCN1B-206ENST00000638536 PTGS1P23219 599 aa25.22■■□□□ 1.63
SCN1B-206ENST00000638536 TMEM63BQ5T3F8 832 aa25.22■■□□□ 1.63
SCN1B-206ENST00000638536 MORC4Q8TE76 937 aa25.22■■□□□ 1.63
SCN1B-206ENST00000638536 ABHD16BQ9H3Z7 469 aa25.22■■□□□ 1.63
SCN1B-206ENST00000638536 ASB14A6NK59 587 aa25.21■■□□□ 1.63
SCN1B-206ENST00000638536 HOXA13P31271 388 aaPredicted RBP25.21■■□□□ 1.63
SCN1B-206ENST00000638536 CCDC144BQ3MJ40 725 aa25.21■■□□□ 1.63
SCN1B-206ENST00000638536 PDGFCQ9NRA1 345 aa25.21■■□□□ 1.63
SCN1B-206ENST00000638536 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.2■■□□□ 1.62
SCN1B-206ENST00000638536 MSCO60682 206 aa25.2■■□□□ 1.62
SCN1B-206ENST00000638536 METAP2P50579 478 aaKnown RBP eCLIP25.2■■□□□ 1.62
SCN1B-206ENST00000638536 HSD17B4P51659 736 aa25.2■■□□□ 1.62
SCN1B-206ENST00000638536 IRX5P78411 483 aaPredicted RBP25.2■■□□□ 1.62
SCN1B-206ENST00000638536 MCF2L2Q86YR7 1114 aa25.2■■□□□ 1.62
SCN1B-206ENST00000638536 FBXO16Q8IX29 292 aaPredicted RBP25.2■■□□□ 1.62
SCN1B-206ENST00000638536 RBM28Q9NW13 759 aaKnown RBP25.2■■□□□ 1.62
SCN1B-206ENST00000638536 ADD3Q9UEY8 706 aaKnown RBP25.2■■□□□ 1.62
SCN1B-206ENST00000638536 PDIA3P30101 505 aaKnown RBP25.19■■□□□ 1.62
SCN1B-206ENST00000638536 EVCP57679 992 aa25.19■■□□□ 1.62
SCN1B-206ENST00000638536 ANAPC15P60006 121 aa25.19■■□□□ 1.62
SCN1B-206ENST00000638536 GHRHRQ02643 423 aa25.19■■□□□ 1.62
SCN1B-206ENST00000638536 TAPT1Q6NXT6 567 aa25.19■■□□□ 1.62
SCN1B-206ENST00000638536 PDRG1Q9NUG6 133 aa25.19■■□□□ 1.62
SCN1B-206ENST00000638536 AKR1A1P14550 325 aa25.19■■□□□ 1.62
SCN1B-206ENST00000638536 RCAN1P53805 252 aa25.19■■□□□ 1.62
SCN1B-206ENST00000638536 GJC2Q5T442 439 aaPredicted RBP25.19■■□□□ 1.62
SCN1B-206ENST00000638536 ANKLE1Q8NAG6 615 aa25.19■■□□□ 1.62
SCN1B-206ENST00000638536 DNERQ8NFT8 737 aa25.19■■□□□ 1.62
SCN1B-206ENST00000638536 IL17RAQ96F46 866 aa25.19■■□□□ 1.62
SCN1B-206ENST00000638536 SEC63Q9UGP8 760 aaKnown RBP25.19■■□□□ 1.62
SCN1B-206ENST00000638536 PPFIA3O75145 1194 aa25.18■■□□□ 1.62
SCN1B-206ENST00000638536 PGK1P00558 417 aa25.18■■□□□ 1.62
SCN1B-206ENST00000638536 EDNRBP24530 442 aa25.18■■□□□ 1.62
SCN1B-206ENST00000638536 ADCYAP1R1P41586 468 aa25.18■■□□□ 1.62
SCN1B-206ENST00000638536 CCT2P78371 535 aaKnown RBP25.18■■□□□ 1.62
SCN1B-206ENST00000638536 GPKOWQ92917 476 aaPredicted RBP eCLIP25.18■■□□□ 1.62
SCN1B-206ENST00000638536 NCOA5Q9HCD5 579 aaKnown RBP25.18■■□□□ 1.62
SCN1B-206ENST00000638536 FAM184BQ9ULE4 1060 aa25.18■■□□□ 1.62
SCN1B-206ENST00000638536 V9GY48 417 aaPredicted RBP25.18■■□□□ 1.62
SCN1B-206ENST00000638536 NID2Q14112 1375 aa25.17■■□□□ 1.62
SCN1B-206ENST00000638536 KIAA1217Q5T5P2 1943 aa25.16■■□□□ 1.62
SCN1B-206ENST00000638536 MYCNP04198 464 aaPredicted RBP25.16■■□□□ 1.62
SCN1B-206ENST00000638536 RARBP10826 455 aa25.16■■□□□ 1.62
SCN1B-206ENST00000638536 RMDN3Q96TC7 470 aa25.16■■□□□ 1.62
SCN1B-206ENST00000638536 COL6A1P12109 1028 aa25.15■■□□□ 1.62
SCN1B-206ENST00000638536 LRRC41Q15345 812 aa25.15■■□□□ 1.62
SCN1B-206ENST00000638536 NTRK3Q16288 839 aa25.15■■□□□ 1.62
SCN1B-206ENST00000638536 TYW1BQ6NUM6 668 aa25.15■■□□□ 1.62
SCN1B-206ENST00000638536 MAF1Q9H063 256 aa25.15■■□□□ 1.62
SCN1B-206ENST00000638536 XPNPEP3Q9NQH7 507 aa25.15■■□□□ 1.62
SCN1B-206ENST00000638536 CAPN2P17655 700 aa25.15■■□□□ 1.62
SCN1B-206ENST00000638536 EIF2AK2P19525 551 aaKnown RBP25.15■■□□□ 1.62
SCN1B-206ENST00000638536 WWC2Q6AWC2 1192 aa25.15■■□□□ 1.62
SCN1B-206ENST00000638536 USP17L6PQ6QN14 398 aa25.15■■□□□ 1.62
SCN1B-206ENST00000638536 NECAB2Q7Z6G3 386 aa25.15■■□□□ 1.62
SCN1B-206ENST00000638536 PXMP2Q9NR77 195 aa25.15■■□□□ 1.62
SCN1B-206ENST00000638536 SYNRGQ9UMZ2 1314 aa25.14■■□□□ 1.62
SCN1B-206ENST00000638536 MYADML2A6NDP7 307 aa25.14■■□□□ 1.61
SCN1B-206ENST00000638536 GCOM1H8Y6P7 765 aaPredicted RBP25.14■■□□□ 1.61
SCN1B-206ENST00000638536 ADAMTS4O75173 837 aa25.14■■□□□ 1.61
SCN1B-206ENST00000638536 POLR2MP0CAP2 368 aa25.14■■□□□ 1.61
SCN1B-206ENST00000638536 SMPD1P17405 629 aa25.14■■□□□ 1.61
SCN1B-206ENST00000638536 TRAF1Q13077 416 aa25.14■■□□□ 1.61
SCN1B-206ENST00000638536 HEATR3Q7Z4Q2 680 aa25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms